Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU81944
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:50605549:50609578:-1 gene:SORBI_3006G143900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGGGCGGTGTGACTGTAGCAGATAAGGCAGAATTCAAGGAGTGCCTGCGGCTGTCC
TGGACACAGCCTTACATCCTTCAGCTTGTGCTGTCTGCTGGCATCGGTGGTCTTCTTTTC
GGATATGATACAGGTGTCATATCTGGAGCCCTTCTCTACATTAGAGATGATTTTGCTGCA
GTGGAAAAGAGCACTGTATTAAGGGAGACAATAGTCAGTATGGCTGTTGCTGGAGCTATA
GTTGGAGCTGCATTTGGTGGTTGGATGAATGACAAATTTGGAAGGAGGCCTTCCATCATA
ATTGCCGATGCCTTGTTCTTTGCAGGCGCCGTAATCATGGCCTTTTCCCCAACACCTAAT
GTTATCATTGTTGGGAGGGTATTTGTTGGTCTTGGTGTTGGGATGGCATCCATGACAGCT
CCTCTGTACATCTCTGAAGCCTCCCCTGCTAGAATCAGAGGTGCTCTAGTGAGCACCAAC
GGGCTTCTCATCACTGGTGGCCAGTTCTTGGCATACCTCATTAATCTAGCGTTCACTAAG
GTGCCGGGGACCTGGCGGTGGATGCTTGGCATTGCAGGGGTTCCTGCCCTGGTCCAATTC
GTACTGATGCTGATGCTTCCAGAATCACCAAGATGGCTCTACAGGAAGGGCAGGAAAGAG
GAAGCTGCAGCAATCTTGCAGAAGATTTACCCTGCGAATGAGGTCGAGCAAGAGATTGAC
GCAATGCGCCTGTCTGTTGAAGAAGAGGTGCTCCTTGAGGGCTCCATCGGCGAGCAGGGA
CTGATTGGCAAGCTGAGGAAGGCGCTGGGCAGCAAGGTCGTTCGCCGCGGGCTATTGGCC
GGCGTCATCGTCCAGGTCGCGCAGCAGTTCGTGGGCATCAATACCGTCATGTACTACAGC
CCGACGATCGTGCAGCTGGCCGGCTATGCGTCCAACAACACAGCCATGGCACTGTCCCTC
ATCACCTCGGGCCTGAACGCCATCGGCTCCATTGTCAGCATGTTCTTCGTGGACAGGGCA
GGCCGGAGGCGCCTGATGCTGATCAGCCTGGTCGGCATCGTCGTGTGGCTCGCCGTGCTC
GGCGGCACGTTCCTGGGCGCCGCGCACCACGCCCCACCCGTCAGCGACGTGGAGACCCGA
GTGCTGGCGAACCAGACCCAGGCGTGTCCCGAGTTCAACCCAAACGTCCCCTGGAGCTGC
ATGAACTGCCTCAAGGCCGCGTCCACGTGCGGCTTCTGTGCTCACCAGGGAGACGAGCTT
CTTCCGGGGGCGTGCTTGGTGCTGAACGACGCGTCTCGGCATGCGTGCCGGGCGGATCGC
CGTGAGTTCTACACGGAGGGGTGCCCGAACAACTTCGGGTGGCTGGCGCTGATCGGCCTG
GGCGCGTACATCGTCTCCTACTCGCCCGGCATGGGCACGGTGCCGTGGATCGTCAACTCG
GAGATCTACCCGCTGCGGTTCAGGGGCATCTGCGGCGGCATCGCGGCCGTCGCCAACTGG
GTCTCCAATCTCATCGTGACGCAGACGTTCCTGTCCCTGACCAAGGCGCTCGGGACATCG
GCCACATTCTTCCTCTTCTGCTGTGTCTCCTTCCTGGCTCTCATCGTCGTCTTCCTCACC
GTGCCGGAGACCAAGGGCCTGCAGTTCGAGGAAGTGGAGCGGATGCTGGAAAGGAAGGAC
TACAAGCCCTGGAAGAGATACCATGGTGGCAGCAGCATCGAGCCGGCGAAAAACAGTGAG
ATTGGCCTCACCACGCCATGA

Peptide Sequence

PEP ID

OQU81944
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:50605549:50609578:-1 gene:SORBI_3006G143900 transcript:OQU81944 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEGGVTVADKAEFKECLRLSWTQPYILQLVLSAGIGGLLFGYDTGVISGALLYIRDDFAA
VEKSTVLRETIVSMAVAGAIVGAAFGGWMNDKFGRRPSIIIADALFFAGAVIMAFSPTPN
VIIVGRVFVGLGVGMASMTAPLYISEASPARIRGALVSTNGLLITGGQFLAYLINLAFTK
VPGTWRWMLGIAGVPALVQFVLMLMLPESPRWLYRKGRKEEAAAILQKIYPANEVEQEID
AMRLSVEEEVLLEGSIGEQGLIGKLRKALGSKVVRRGLLAGVIVQVAQQFVGINTVMYYS
PTIVQLAGYASNNTAMALSLITSGLNAIGSIVSMFFVDRAGRRRLMLISLVGIVVWLAVL
GGTFLGAAHHAPPVSDVETRVLANQTQACPEFNPNVPWSCMNCLKAASTCGFCAHQGDEL
LPGACLVLNDASRHACRADRREFYTEGCPNNFGWLALIGLGAYIVSYSPGMGTVPWIVNS
EIYPLRFRGICGGIAAVANWVSNLIVTQTFLSLTKALGTSATFFLFCCVSFLALIVVFLT
VPETKGLQFEEVERMLERKDYKPWKRYHGGSSIEPAKNSEIGLTTP

Transcript Sequence

Transcript ID

OQU81944
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:50605549:50609578:-1 gene:SORBI_3006G143900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCCTCGTCTTGTCTTCGTTCTCTCGTGGTCAGGGAGGGACCGAGGGAGTCTCTCGGCTCT
CTGCTGTGCGGCGCTGGCGGAGGAGGGGTTTTGATCGCTTCCTTCGTCTCTCTCCTCGGT
GAGGCCTCTTCCTTCGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCGGTGAGGCCTCTGGCTTGCGCCGCTGCACGCATTCTGTTCTC
GTTCGCATCCTCCGCCTCGTCCGCCGTGCGGAGAGAGGTCGGGGATTCTGCGGGTTTCCT
TTTACTCGTTCTCAACTCATCAAAAGCGTGGAGGGGTTTCTCGGGAAGTACGGGTATGGG
TGGTTGTTCCGGGGTCAGTGTGCGTTCCCTCTGCAGATCATACCTTTCCATAAGAATCGG
TCTGTTGGTTTGCGATCGAAGAAGATCGTATCGCTATACGAGATTTCGTCTGATTTTTGT
TTTCCCTTTTTTACCCGTCTGCATGAACCCTGAATCCTCTATATTGCCTTAGATTTCGTT
TATACCTTTCGCCACGGTTGGGTAAGTTCACGCCACTCTGAAGTCTGAACTATTTCCGCG
ATTATGGTTTGTGGCTACAAGATGCTAGTTCTCTGCAATGCAGAGGGTGCTGCTTTTGGC
ATCCAAAAGATAGGATTATGGCTATTGGCTACATGTAACATGCCTACATTACATTTGTCT
TTACATGTAAAAGCATCTTTATAAGATTCCCTCTTTTCATCTCGATAGAGATTTTCAGCC
ACCGTTTCCAGATTCTGTTTCAGCCTGTTCTGATTGATCGTGATGCTCAGAATTTCGCAT
GTTATTATACGTCCATAAAAAGAGTCCTGATGTTTGGTTTACTGAACCGTCGTAATCTGC
ACTTCCAGCACAACTTACTAAAGCCTGTTTGTTCGTGTCAACTCCAGTGAATTCCTGTTT
GGCTGTTTTACCGATACAGTGAAGTGTGTGGCCGAGTACCTACACCAAGTTGGATATCAA
TGGAGGGCGGTGTGACTGTAGCAGATAAGGCAGAATTCAAGGAGTGCCTGCGGCTGTCCT
GGACACAGCCTTACATCCTTCAGCTTGTGCTGTCTGCTGGCATCGGTGGTCTTCTTTTCG
GATATGATACAGGTGTCATATCTGGAGCCCTTCTCTACATTAGAGATGATTTTGCTGCAG
TGGAAAAGAGCACTGTATTAAGGGAGACAATAGTCAGTATGGCTGTTGCTGGAGCTATAG
TTGGAGCTGCATTTGGTGGTTGGATGAATGACAAATTTGGAAGGAGGCCTTCCATCATAA
TTGCCGATGCCTTGTTCTTTGCAGGCGCCGTAATCATGGCCTTTTCCCCAACACCTAATG
TTATCATTGTTGGGAGGGTATTTGTTGGTCTTGGTGTTGGGATGGCATCCATGACAGCTC
CTCTGTACATCTCTGAAGCCTCCCCTGCTAGAATCAGAGGTGCTCTAGTGAGCACCAACG
GGCTTCTCATCACTGGTGGCCAGTTCTTGGCATACCTCATTAATCTAGCGTTCACTAAGG
TGCCGGGGACCTGGCGGTGGATGCTTGGCATTGCAGGGGTTCCTGCCCTGGTCCAATTCG
TACTGATGCTGATGCTTCCAGAATCACCAAGATGGCTCTACAGGAAGGGCAGGAAAGAGG
AAGCTGCAGCAATCTTGCAGAAGATTTACCCTGCGAATGAGGTCGAGCAAGAGATTGACG
CAATGCGCCTGTCTGTTGAAGAAGAGGTGCTCCTTGAGGGCTCCATCGGCGAGCAGGGAC
TGATTGGCAAGCTGAGGAAGGCGCTGGGCAGCAAGGTCGTTCGCCGCGGGCTATTGGCCG
GCGTCATCGTCCAGGTCGCGCAGCAGTTCGTGGGCATCAATACCGTCATGTACTACAGCC
CGACGATCGTGCAGCTGGCCGGCTATGCGTCCAACAACACAGCCATGGCACTGTCCCTCA
TCACCTCGGGCCTGAACGCCATCGGCTCCATTGTCAGCATGTTCTTCGTGGACAGGGCAG
GCCGGAGGCGCCTGATGCTGATCAGCCTGGTCGGCATCGTCGTGTGGCTCGCCGTGCTCG
GCGGCACGTTCCTGGGCGCCGCGCACCACGCCCCACCCGTCAGCGACGTGGAGACCCGAG
TGCTGGCGAACCAGACCCAGGCGTGTCCCGAGTTCAACCCAAACGTCCCCTGGAGCTGCA
TGAACTGCCTCAAGGCCGCGTCCACGTGCGGCTTCTGTGCTCACCAGGGAGACGAGCTTC
TTCCGGGGGCGTGCTTGGTGCTGAACGACGCGTCTCGGCATGCGTGCCGGGCGGATCGCC
GTGAGTTCTACACGGAGGGGTGCCCGAACAACTTCGGGTGGCTGGCGCTGATCGGCCTGG
GCGCGTACATCGTCTCCTACTCGCCCGGCATGGGCACGGTGCCGTGGATCGTCAACTCGG
AGATCTACCCGCTGCGGTTCAGGGGCATCTGCGGCGGCATCGCGGCCGTCGCCAACTGGG
TCTCCAATCTCATCGTGACGCAGACGTTCCTGTCCCTGACCAAGGCGCTCGGGACATCGG
CCACATTCTTCCTCTTCTGCTGTGTCTCCTTCCTGGCTCTCATCGTCGTCTTCCTCACCG
TGCCGGAGACCAAGGGCCTGCAGTTCGAGGAAGTGGAGCGGATGCTGGAAAGGAAGGACT
ACAAGCCCTGGAAGAGATACCATGGTGGCAGCAGCATCGAGCCGGCGAAAAACAGTGAGA
TTGGCCTCACCACGCCATGAAATCCGCATAGGCTCTGTTATCTAGATTCAAGTAGCAATA
ATTCGTAGTGGTAGTTTATAATAGATGGTCTGCTGATCCCCATCTAGACTTCCAAGAAGT
AAAAATGAGGCATTAGTCATTCAGTTATTACAATGTGACACTTGATAGCTGCTGTTTTTT
TTGTTCTAGAGCATTTAATCTTGATTTTAGCACTGGCCTGGCTTGTTATATTAGGGCCGC
ACTGTGTTTAAGACAACATTCAAAATTGTTTTTTTTTTTACTTTTTACCATTTGGTGATG
AAAGAAAACT