Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU81888
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:49884755:49890896:1 gene:SORBI_3006G136100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGCACCGGGAGGACGGCCCCCTCCAACTCCAAGAAACAGCCGCCGATGACCGTGGC
AAATGCTGTGTCGCGTCCCCCTGCGGGTGGCTGGGGCGGCTGTCCCGCGAGCTGCACTGG
AGCTTCGTGCTCGCGGTCGTCGCCGTCTACGGCGCCTGCCAGGGCGTCGGCAACGCCATC
GGCGGAGTCGCCGCGGCGTACTACTGGAAGGACGTGCAGCGCGTGCAGCCTTCGGCGGCC
CAGTTCTACCAGGGCGTCACGGACGCGCCGTGGATCGTCAAACCCATCTGGGGCCTGCTC
ACCGATGTCGTCCCCGTGGTCGGGTTCCGCCGCCGCCCATACTTCGTTCTCGCAGGCGTG
ATTGGCGTGTCATCTATGCTCATGCTTTCCCTAAACCACGAGCTGGGGATCGTTCCGGCA
TTGCTGATGCTGATAGCGCAGAGTGCGGGTGCCGCAATAGCCGACGTGACGGTGGACGCT
CTGGTTGCTCAGAATAGCATCACGCACCCGCCCCTTGCTGCTGATATGCAAAGCTTGTGT
GGGTTTAGCTCCTCTGTTGGGGCGTTGCTTGGATTCTCCTTAAGTGGCTTGCTTGTGCAC
TCGATGGGCTCCCAGGGGGCTCTTGGTCTGTTGAGTATCCCATCTGCACTGGTGTTATTA
GCTGGCATTCTGCTGAAGGAGAACCGTGGTACAGAATTTGATTACATGCAGGTTCACAAG
AAGTTCTACAAAGCAATACAATCCATGGGAAGAACACTGAAGTGCCCCGAGGTCTGGAGA
CCATGTGTATATATTTTTGTTTCTCTCAATTTAAGCCTGGATATTCAAGGAGGAATGTTC
TATTGGTACACGGATGCTGTTGTTGGACCAGGATTTTCTGAGGGATATATTGGTCTCATC
TATTCAATTGGTTCAGTTGGTTCACTAATTGGAGTTTTACTATACCAAAGCGCACTAAAG
GACTATCCTTTTCGGAGCATGCTATTATGGGGTCAAGTGCTCTCAAGTCTAGCAGGAATG
CTTGATCTGGTGTTAGTGACCCGGCTAAACCTGAAAATTGGCATGCCGGATTACTTCTTT
GCAGTGGCTGATAACGCAGTTTCCCAAATGGTTGGTAGGCTCCAATGGCTACCACTACTT
GTGCTTTGCTCCAAGCTTTGTCCTCCCGGCACTGAAGGAACATTTTATGCATTACTCATG
TCTCTACAAAATGCCGGGTTGCTGATGTCTGCTTGGTGGGGTGGCCTGCTGCTGCACATG
CTGAACGTGACCCGAATGGAGTTCAGTAACCTCTGGATCATCGTCTTGATTAGAAACACA
TCAAGGCTTGTCCCTTTAATGCTACTGTTTCTTGTGCCTGATTGTGATCAGAACTCAACA
CTCCTGCCTGCAGAGATGCTTCATGGCAATGAATCAACAGAAACCACAAAAAATGGATCA
AATCAGTTTTCTATTCTTGTTGGGGACAATTCTGGCTGCATTTCTCCTGGTGTGGCAGTT
GATAACGAGCAAATCAAAATGATAGATGCTGAAACTGATGATGTCGAATTGATCCCATTG
GTTAACAAGAGCGGGCTGACCGTCTCATGA

Peptide Sequence

PEP ID

OQU81888
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:49884755:49890896:1 gene:SORBI_3006G136100 transcript:OQU81888 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEHREDGPLQLQETAADDRGKCCVASPCGWLGRLSRELHWSFVLAVVAVYGACQGVGNAI
GGVAAAYYWKDVQRVQPSAAQFYQGVTDAPWIVKPIWGLLTDVVPVVGFRRRPYFVLAGV
IGVSSMLMLSLNHELGIVPALLMLIAQSAGAAIADVTVDALVAQNSITHPPLAADMQSLC
GFSSSVGALLGFSLSGLLVHSMGSQGALGLLSIPSALVLLAGILLKENRGTEFDYMQVHK
KFYKAIQSMGRTLKCPEVWRPCVYIFVSLNLSLDIQGGMFYWYTDAVVGPGFSEGYIGLI
YSIGSVGSLIGVLLYQSALKDYPFRSMLLWGQVLSSLAGMLDLVLVTRLNLKIGMPDYFF
AVADNAVSQMVGRLQWLPLLVLCSKLCPPGTEGTFYALLMSLQNAGLLMSAWWGGLLLHM
LNVTRMEFSNLWIIVLIRNTSRLVPLMLLFLVPDCDQNSTLLPAEMLHGNESTETTKNGS
NQFSILVGDNSGCISPGVAVDNEQIKMIDAETDDVELIPLVNKSGLTVS

Transcript Sequence

Transcript ID

OQU81888
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:49884755:49890896:1 gene:SORBI_3006G136100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GAGCTCGGATTTGCGTGGAGTAGCACTTCGCCTTTTGCGCAGTTGTGCCTGTAACAATTT
TTCGCATCTCACTTCTCACCAAACGGTTGCGCTCGCAGGCTCGCAGATTCCAGCGGCTTC
TCTCTAGATCCGCAAGTAAAACCTGAGAAGGAATCGCTCCTGACAAGGTGCTCAAATGGA
GCACCGGGAGGACGGCCCCCTCCAACTCCAAGAAACAGCCGCCGATGACCGTGGCAAATG
CTGTGTCGCGTCCCCCTGCGGGTGGCTGGGGCGGCTGTCCCGCGAGCTGCACTGGAGCTT
CGTGCTCGCGGTCGTCGCCGTCTACGGCGCCTGCCAGGGCGTCGGCAACGCCATCGGCGG
AGTCGCCGCGGCGTACTACTGGAAGGACGTGCAGCGCGTGCAGCCTTCGGCGGCCCAGTT
CTACCAGGGCGTCACGGACGCGCCGTGGATCGTCAAACCCATCTGGGGCCTGCTCACCGA
TGTCGTCCCCGTGGTCGGGTTCCGCCGCCGCCCATACTTCGTTCTCGCAGGCGTGATTGG
CGTGTCATCTATGCTCATGCTTTCCCTAAACCACGAGCTGGGGATCGTTCCGGCATTGCT
GATGCTGATAGCGCAGAGTGCGGGTGCCGCAATAGCCGACGTGACGGTGGACGCTCTGGT
TGCTCAGAATAGCATCACGCACCCGCCCCTTGCTGCTGATATGCAAAGCTTGTGTGGGTT
TAGCTCCTCTGTTGGGGCGTTGCTTGGATTCTCCTTAAGTGGCTTGCTTGTGCACTCGAT
GGGCTCCCAGGGGGCTCTTGGTCTGTTGAGTATCCCATCTGCACTGGTGTTATTAGCTGG
CATTCTGCTGAAGGAGAACCGTGGTACAGAATTTGATTACATGCAGGTTCACAAGAAGTT
CTACAAAGCAATACAATCCATGGGAAGAACACTGAAGTGCCCCGAGGTCTGGAGACCATG
TGTATATATTTTTGTTTCTCTCAATTTAAGCCTGGATATTCAAGGAGGAATGTTCTATTG
GTACACGGATGCTGTTGTTGGACCAGGATTTTCTGAGGGATATATTGGTCTCATCTATTC
AATTGGTTCAGTTGGTTCACTAATTGGAGTTTTACTATACCAAAGCGCACTAAAGGACTA
TCCTTTTCGGAGCATGCTATTATGGGGTCAAGTGCTCTCAAGTCTAGCAGGAATGCTTGA
TCTGGTGTTAGTGACCCGGCTAAACCTGAAAATTGGCATGCCGGATTACTTCTTTGCAGT
GGCTGATAACGCAGTTTCCCAAATGGTTGGTAGGCTCCAATGGCTACCACTACTTGTGCT
TTGCTCCAAGCTTTGTCCTCCCGGCACTGAAGGAACATTTTATGCATTACTCATGTCTCT
ACAAAATGCCGGGTTGCTGATGTCTGCTTGGTGGGGTGGCCTGCTGCTGCACATGCTGAA
CGTGACCCGAATGGAGTTCAGTAACCTCTGGATCATCGTCTTGATTAGAAACACATCAAG
GCTTGTCCCTTTAATGCTACTGTTTCTTGTGCCTGATTGTGATCAGAACTCAACACTCCT
GCCTGCAGAGATGCTTCATGGCAATGAATCAACAGAAACCACAAAAAATGGATCAAATCA
GTTTTCTATTCTTGTTGGGGACAATTCTGGCTGCATTTCTCCTGGTGTGGCAGTTGATAA
CGAGCAAATCAAAATGATAGATGCTGAAACTGATGATGTCGAATTGATCCCATTGGTTAA
CAAGAGCGGGCTGACCGTCTCATGATGCGTTGAATCCAGGATCCTTATGCTGATTCTACT
ACTGGTTCTTTCCAGCCTGTTGTTGAAGACGGGAAGACTTTTTTTACTGTGACATGAAAG
ACAAAGGGAACTGAAGCATTGGATAATGAAGGCAGATGAGATACTGTTACAGGGGTATAG
TTTCAAAAAAGATACTGTTACAGGGGTGAGGGCACCAGTCATTTGCTGGAGTTGATCGAG
CTCAACCGTACTTTCATGGTACATGCTGTAGTTGTTAATTTAGTTCAATTCCTTCTGTCA
CCCTAGATGAGCAACTGACTGACCACAATGTTTCTTGTTATAGAAAGTCCATTCTTTACT
CAATTTTTTTTTAAAAAAAGGAGAAAACATCTGGCTTTTAGAAAGCAATAGAATACACGG
TTTTACAAAAGAAAACGCTGGGGACTCCAGCTACCCAGGCAAACCAGACAGCCTTGTTTA
GCAAAACACTTAGAACATCTGCTGCTATATTGAATAGTAGAGTTGAAAGAGGGTCTCCCT
GTCTCAACCCTTGGAAACTTTTAAAGAATTCACTCCTGTCATTTACATTTACGCAAACTC
TAGCCCATTGCACATATTACTCAGTTTCAAGCACAAGTCCTTTGGCCCCCAATGTAAACA
AACCGGAATTACAGTAATGCGTTTCACAGAATCAGTCTAACTCTTGGCTTTGCAATCTGA
GCTTGAATGTCTGTTTTGTTGATGACATGTCCGACTGCTTGAACCGTGTAGACGCCAGCA
GAGTAGTAACATTCGGCAGTCGAGTGCCGAAGCCAAATGGCCTATGCCCACCCACGCGGG
GCGGAAGCGCTCAACAGTCAACAGCGCCCGTTCCGTTCCGCGGACTCGTGCGCTGCTCTA
CCGAGGCCAATCAGCTGCTCGATTTGCTTCTCCCTCGGTGAACAGTGAACTTGATCCCTG
TTTGGATTTGCTTCTGTAGTTCTGTGAACGTGAAAATTCTAGATTCGAAAAAATATATAA
AATTTTCTAGAATCAAATGGCAGACCATCCCAACCCACTTAGTACCTCTAACCTCAGTCA
TGATGCCCCGTTCGTCAGAAATCCGAAAAAATAATAGAGAGATGACAAACATGAAAGCTG
CACTGTTCATTTGTTCAACCATTCATCTTCAGAAGCCGCAACATCACCACATGTTTTACA
TCAACACACGGGACAGAGGTCTTGTACACACACCAGGGACGTTTCAAACCAAGCCTGAGA
CGGTAACCAGGCGCCTTGGTTGCCCAAAACCAACGGTGATGATGCTCTACTGTTGCGCCA
GCCGCTTCAGGTGCTGAAAGAGCTTCTGTTTTATCCACTGACGGTCATATGGCAGGAAAG
CGTGAAGTGAATCTTCGTACCTGCAAGGAAAGCATAGCGTGTAAATTCAAGAACGTCATA
TGAATATGATTAGTTGTCCCACCTTCCTGATTAAAAGCTTTGACAGTCGAGAAACATGCA
CTCACACCAGTGCACTTATGTCAGTCAGGCCATCGATGAAGTTGTACAGGTCACTGATAT
CATAAGTCAAATTCCCGACCATCGGGTTGATATTCCTGATTTTCCTTTCATAAAGACCAC
AGATTCCTTTCATTCCAGATAACAACATGGTAAGAAAAACAACATGTGCTGATAACAAAT
AACTCAAATATTAGCCACATAACTGCTGAATAACAATATGGTCATATGAACAATATGGCA
AAGTTAACAATTCTCATATCATGACAAATATGATATAGTTGACTACTGCATGCTGTATCG
GTGTCATATGGTCAGTTGAATCTGTGAATCCACATATCTTTCATTGAAATTGAAGTGACT
TGCATATTCTTCAAAGAGAAGTCAATAAAATTGTTGAACCCAAGCATTAGCATTATGTAC
AAACAGTAAACATTAGATATTGGTGTTTTGCTTGGTGGACTGAAAAGTTGCCTGGTACAG
GCAACGCACCCAGACCAGGTATGCAAGCAAACAGCCCATAGCACACAATGTCCTTTTTCA
CAGACAATTGCCAGATCATCAGTTATATGCAGAACACCAACTTAAGAACCAGTAAAAATA
GAAGATAGCAATCTCAACTTCCAAGCCATACCATGACACCGATACAGCAGCAAATAGACC
ATAGCTCATCACAAAGGTTTAGTAGATAAACCATATACACCATTAGTACTGACTAGTGTG
CGTTTGGTAGAGTTCTAGATTCTTATAAAAACGTTTTGAATCCAGATTATCTTCAGAAAC
GTTTCTATAGTGATTCAGAATCACCTTGAGGGACTATTTGACACGTAGGCTAGATTTTGA
TTCTTGAAAGAGAGGGTCTTATGAGAAATGGCTAGCATACCACTTGTATTGATATATGTT
TCACGCGGCTGATGGGCATGGACTCATCAGCTTCTTCTTGTTTTTCATAACTGGACATAG
GCATTATCTTTTCTTTTTTGGCCCAAGTCGTACCTTCTTGTCTTCTTCATCCTCACACAC
ACATCTGGTATCTCCCATGCACCATGGCTGAGAGCTGCTATAGCTCCCATGGGTACAGGA
GCTATAATACCTAGATTAGAATCGAGCAAAGTCGAGCGTCCATTGCCTCCTCCCTCGCTC
CCCTCAATCAAAACACAAAACCCTCGCACTCACCCTCCAAACCGTGCTGCACTCACCAAT
CTGTGTGTTTATCCTGTAACTCTGAAACTCCCTTTCCTTTAATGAAATACGCACTATTGC
ACGTTTGCGAAACAAAACACAAAACCCTCAATGAAAACAAGCAATTTCAGGTGCTTAGGG
ACAGTGGGAGGAGATGGATCCTGTGGTGATGCAAGTGGCAAATACAGGTAAATTCAAAAG
GGGAGGTAGGAACGCAGGTAGTGATTCTCCAGCAAAACTGGGTTTTGGGTATTTCTCGTT
TGTAGGCAAAACGAGTAAATCGTCTGCAGCCGTTCCACACTCGAAACAAATTGTTTCGAC
GTGCCAAACAGGGCCTAAAAGTAGCAGTGTCATTTACACAGCTAAATGAAGGAAAGAACT
TGCAACCTTCCTCGAAATCAGTAAAGGCGTGAAGCAGATGCTTTAAAGCACAGAAAATAA
TTGAGTGGTGTTACTATGGCAAACGAACTGCGGTGAAGAAAGGTTAACATTTATGCGATA
ACCTCATAATTATTTACAGTCATATGGAGAAAACAAAGTAATGATAAAAGCTAGAATTGC
ATTAGCATTTTAGGCAAGGATATGAGAAGAGAAGGAAAAAACGAAGTTACATACCATCCA
GCGCATGGTTAACTGAATCGTAGTCCATAAATGTCCTCGTCGATCTGTTCTGCGATGGTT
GCATGAGAATGATGGTATGCCTTCCAGCCTGCAAGTGCGTTAGAAATGCATTGGAGCCTG
AAATATTCTCAGTCACCGAGTAGACATTGCTGACAGGGCAGAGGACACTACGAACAGGAT
GCAGTTTGCAGATGCTGAAAAGGGGTTCAAAGCTACAGAGACTGACAATTTTTGACAATA
TAAAGTATTCGAAG