Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU81856
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:49566078:49570940:1 gene:SORBI_3006G131400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAAGGCACCATCACTGCTGGTTCAGTGTTTCCCTGGCTTGCTTCCCAGCAAGGCCACT
AGTTGCGTGCCAATTATATCTGAGAAGGATCTGCAGCTACCATCACCAGCTGTTGAAATA
ATCCCCTCAAAGAGTGCTCATCCATACAAATATGCTGGAGAGAAGGTTGATGTGCAAGGT
CTTGATATTTTCAAGGGTAAAGTCAGTGTAGCGGATATGATAGCCTTCTCACCGTCTGAA
GTAGCATCATCAAAATATGATGGAACTCTGAAATACTGGGAGAGTTCCATTACTCTTGTC
AACATTCTTAAAAATGAGATCCGTGATGGGCAGTTGAGCTTCAGGGGAAAGCGGGTTCTA
GAGCTTGGATGTGGATCTGGCCTCTCCGGGATTTTTGCCTGCTTGAAGGGTGCATCCACA
GTTCACTTTCAGGACATAAATGCAGAAACCATACGATGCAGAACAATACCCAATGTTCTT
GCAAATCTTGAGCAGGCTCGGGACAGACAGAATAGACCATCCGAGAGCCCTGTTACGCCA
TCTAGGCAGCTCTTGGCTCCAAATGTACATTTCTATGCTGGAGAGTGGGATGAACTCCCA
ACAATTCTCTCAGTCGTGCAGCCACCCGCGGCACCAACAAACCTCAGCTTCTCTGAGGAT
GATTTTATGGATGTCTGCAGTAGTCATGATGGAAGCAGTATAGTTGGTCATGACTACTGC
CCCAGAAGATCTAGGAAGCTTTCTGGTAGCCGTGCATGGGAGAGGGCTAATGAGACTGAC
CAAGCAGACGGTGGCTATGATGTAATTTTGATTTCTGATGTCCCCTACGCAGTTAACTCT
CTGAAGAAGCTCTATGCACTTATTTCAAAGTGCCTACGTCCTCCTTATGGAGTCCTGTAC
GTGGCTTCCAAGAAGAACTTGGTTGGTTCCAATGGTGGCGCCAGGCAGCTTCGAGCTCTG
ATGGAAGAGGAAGGTGTCCTTGGTGGTCACTTCTTGACTGAGGTTTGTGACAGGGAGATA
TGGAAGTTCTTTTTCAAGTGA

Peptide Sequence

PEP ID

OQU81856
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:49566078:49570940:1 gene:SORBI_3006G131400 transcript:OQU81856 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MKAPSLLVQCFPGLLPSKATSCVPIISEKDLQLPSPAVEIIPSKSAHPYKYAGEKVDVQG
LDIFKGKVSVADMIAFSPSEVASSKYDGTLKYWESSITLVNILKNEIRDGQLSFRGKRVL
ELGCGSGLSGIFACLKGASTVHFQDINAETIRCRTIPNVLANLEQARDRQNRPSESPVTP
SRQLLAPNVHFYAGEWDELPTILSVVQPPAAPTNLSFSEDDFMDVCSSHDGSSIVGHDYC
PRRSRKLSGSRAWERANETDQADGGYDVILISDVPYAVNSLKKLYALISKCLRPPYGVLY
VASKKNLVGSNGGARQLRALMEEEGVLGGHFLTEVCDREIWKFFFK

Transcript Sequence

Transcript ID

OQU81856
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:49566078:49570940:1 gene:SORBI_3006G131400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACAACGGGGAAGAAGGCAGAAGAAAGAAGGTGACGGAAACAAAAAGGCAGCCGCGCCGGC
GCACCGGCCGCGCACATCTGAAGACGACGCTCGGGATTCACACCCACACGGCCACACGTC
CTCCGCGCGGCGCGGTATATTCCACCAGACCAGATCACCCACCTTCCCCTTCCCGGGGCA
ATCCGGTAAATTGTAATCACAAGATTGCACGAAAGAAAAGAACGGGGGGAAAAGAAAAAC
CGACACTCGTCACAGGAGTAGAGTGGAAATCAGCGGCCATGGCAGCAGAAACGGCGAAAC
TTCCACCCCACCTTCCCCTCCTGCTGCGTATATATACTCGCCCCGGCTCCCACCTCGCTC
CAGTCTAGACGGCGGTTTGACTTTCTGACCGGGGAATCGGAGCTGCGTTTGATTTGATTT
GAGGAGAGGAGACGCAGACGAGACGGGAGGGATCTTCGCTGGGGAATTCGGAGGAGCGTT
TGCCCGATTCGTCGCGGTTCTCGGAGGAAGGGAGGGTGCACATCGGGCTCCGATCGAAGA
GGTAATCTCTCCGTTCGTGTCGGCGCAGGCTTCCTGACTTTTGGAGGCTCCATCTCGGGG
ATTTCGTGAGGGATAGGCCGGAACGGCGCAGAGTACGGTAGAATCTGGTGTTTCGTCAGG
GTACGGTTCGGGTTTTTGAGGGGGGAAAGGAGGTTTTTTTGTTGGAGGTTACCGAGCGCT
ACTTCGGGCGTGTGGCTTGATTCGTACTCGTGTGATTCGTTTGTTTGCTTGTTTGTTTTA
CGGTGTGATCTGAGTGGTATTGGCTGTTTATTTGAGAAGATAGGGTGTATTAAGGATTTA
CTAGTAAGGTTTCACTATGTGGAGTTGGATTTTGTGTTCCCTATTTTATTTTGTGTTCGT
TTGTTAACGTGGCTTCAGACTGTCCTAGTTTATTTTCAAAATTAACTTTGATGTGCAGAA
GCAGCGAGCATTGTTCGAGTTGCAGTACTCCAGTTCTTTCATTCACGGTTTATCATCTGA
ATTGTGCTGGTTATTGCCTGGTGACCTAAATTTCGGTTATATTTTGTTCGGTTGTGGGAG
AAGTTGCACGAAGTTGTCACAGGAGTTACCTTGTAGATGCTGTTTGATTTTGTGCCTGCC
GTATGGGCTATCATGCTCCTTTTCATTCCATTCCACCATTTCCCTCGTTGGAGTCTCTAG
AAGATGACAGATTTGCGCAGAAAGATGTAGGAGTAGTAATAATTTTGAACTTACCCAAAT
ATGGATGATGGTTAGATTTATGTGGGTAAGATAATAGGTGGCTTTTTAGTCGGGTACTTT
TGCAGCACTACTTTTGCAGATTCAGAGGTTGGGTAGGTACAAGATCGCTATTCAATGCCA
TTGTTAGCTTCCCAGTATGTTTTAAATTTTGAGGTGGGCAAGAAAGGTGCCGGATTTGGT
TGCCCAATAGGGAGGTTCCATTCTGTTGGTGTGCCCATTCTGAGTACCAGTGTTTTGTTG
GTCCTAGAGAGTAGCACAGGACATATAGCTTCCCTTTTATCTGGTGATATATAGTTGTAA
ATTGTAATGGTATGTCTATCAGGCATTTTTGGAAAGAGTATAATTTTATTTTTTTCGCAT
TTGGGTTACCTTGGCTTTAATGGTGGGATTGTAGAATTCGTTAGCAGTTACTTTGGCTTT
AACGGTGGGATTGTATAATTCTTTAGCAGTCACTATGTATCAGACAGTGAATGTACATTA
ATACGGTAAATTGTTTGTCAATGCTCAGCTACTTCTGTTGCTTGGTTACTCCTTGTAGAT
TATCTTGTATAACTTTTATTGTTACTGAAACTACTTTGTTTAACTTCAGCACAGTTACTT
TAGCAAACAATGTAGATAGCAAGTTATCCAGATTTAGTTGGAGATTAATGGTCAAGGAGT
GGAAGCTTACTTAGGCTATCTTTCATGTTGAAGTGTTGTGATTCTTCACGTGATTTTGTT
GTAGTGTATTTATTATTCAGTTTTTTGTTTAAAGGAAAAACTTAATATTGTTTTTCCCCC
TTTCAGCTTTGTTAACATCGGAGGTTAAAAGGTAGCACTGTAGCGCAATGAAGGCACCAT
CACTGCTGGTTCAGTGTTTCCCTGGCTTGCTTCCCAGCAAGGCCACTAGTTGCGTGCCAA
TTATATCTGAGAAGGATCTGCAGCTACCATCACCAGCTGTTGAAATAATCCCCTCAAAGA
GTGCTCATCCATACAAATATGCTGGAGAGAAGGTTGATGTGCAAGGTCTTGATATTTTCA
AGGGTAAAGTCAGTGTAGCGGATATGATAGCCTTCTCACCGTCTGAAGTAGCATCATCAA
AATATGATGGAACTCTGAAATACTGGGAGAGTTCCATTACTCTTGTCAACATTCTTAAAA
ATGAGATCCGTGATGGGCAGTTGAGCTTCAGGGGAAAGCGGGTTCTAGAGCTTGGATGTG
GATCTGGCCTCTCCGGGATTTTTGCCTGCTTGAAGGGTGCATCCACAGTTCACTTTCAGG
ACATAAATGCAGAAACCATACGATGCAGAACAATACCCAATGTTCTTGCAAATCTTGAGC
AGGCTCGGGACAGACAGAATAGACCATCCGAGAGCCCTGTTACGCCATCTAGGCAGCTCT
TGGCTCCAAATGTACATTTCTATGCTGGAGAGTGGGATGAACTCCCAACAATTCTCTCAG
TCGTGCAGCCACCCGCGGCACCAACAAACCTCAGCTTCTCTGAGGATGATTTTATGGATG
TCTGCAGTAGTCATGATGGAAGCAGTATAGTTGGTCATGACTACTGCCCCAGAAGATCTA
GGAAGCTTTCTGGTAGCCGTGCATGGGAGAGGGCTAATGAGACTGACCAAGCAGACGGTG
GCTATGATGTAATTTTGATTTCTGATGTCCCCTACGCAGTTAACTCTCTGAAGAAGCTCT
ATGCACTTATTTCAAAGTGCCTACGTCCTCCTTATGGAGTCCTGTACGTGGCTTCCAAGA
AGAACTTGGTTGGTTCCAATGGTGGCGCCAGGCAGCTTCGAGCTCTGATGGAAGAGGAAG
GTGTCCTTGGTGGTCACTTCTTGACTGAGGTTTGTGACAGGGAGATATGGAAGTTCTTTT
TCAAGTGAGCAAATCCAGGAAGTGGAAAGACAAGGAAATGAGTCCTGACGTTGAAACCCA
GTTTTTCGGTTTCTATCTGCAGCGATGTACATACCGTGAGGCATAGTTCCATTAATTCTT
TGGTAGTAGGTTGAAACTTCAAGAAATATCTGTAGTTGAGCTTGCACAAGTGTTGGAATC
CTTTACCGTTTTGTAGATCTGATATGCGCTAATGTCGTTCTGTTAAGTACAGAAAGCAAA
TTGTAGTAACCTTTTATATATCGAATATATGGTGATGGCAATTCAGCCGGTGCATGG