Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU81821
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:49028748:49031424:-1 gene:SORBI_3006G124600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACGAAGTGCAGGTTCCAAATGGATACCACGGATAGCAAAGCATCCGTTGTTACAAAG
GTCCACAACATTGTGAATGAGAGCACCTCCCACTCTTGTCCATCACTACAGCAAATCCCC
CTCACTTCAAATCCGTCCCTTCTCCTCCATGTGCTCTCTTCCTACGGGCTGGAACCCAAG
GATCTGGCTGCTTTGGAGGTTGCATGTCAATTCTTCAGAAGGCCTGCAAAGTTTGAGCCA
GATGCCACGTTGTCTCTCCCTGAACTTGCAGCATATGATACTTGCTGCCAAAAGGCCATC
TTTAAGTCAATGGAGCAAAAGGAAAAAGACAGCTTGAAGCAGCGGTGCGGCGGCTCTTGG
AAGCTTGTCCTTACGTACCTGTTGGTCGGCGAGAAGAATTACCACCGTGGGAAATCTCGG
GTTGTAGCTGGACCAGGGCACACCATCGCTGTCACATCGAAGGGGGATGTGTACTCATTC
GGCGCAAATTCTTCAGGGCAGCTTGGGCTTGGGAATACAGAAGAACAGTGCAAACCATGC
CTTATTAGGTCTCTGCAGGGCATCAGAATCACACAAGCCGCAGTCGGTTCGAGGCGGACA
ATGCTTGTAAGCGACACAGGAAGCGTGTATGTGTTTGGACAGGATATTTTCGCGGGTTTA
GAATTTGCTGGTGATTATACCAGTAGCCCTAAGGTTGTGGAGTCATTGAAAGGCATATTT
GTAGTCCAAGCATCTGTTGGAGGCCACTTCTCTGCAGTTCTGTCTAGAGAGGGTCAGGTT
TACACTTTCTGTTGGGGGCATGATGCAAGGCTTGGTCATCATTCAGATCCAACTGATCTC
GAGCCTCGCCTTCTCTCTGTACCGCCTAAGGATGCTCTTGTTATGCAGATTGCCGCGGGC
AACTGCTATCTCCTTATGTTGGTCTACCAACCTACTGGAATGTCGGTCTACTCAGTAGGG
TGCGGTGAAGGAGGCAAGCTTGGGCATGGATGCACGATAAGCCTGACGATCCCAAGGATG
ATCCAACAGTTCAAGACACTGAAGGTAAAACCGGTGTCGGTTTCAGCAGGCGCTTTCCAT
TGTGCAGTTCTGGCAAGCGACGGACGTGTGTTCACCTGGGGATGGGACTCCGACACTGGT
TGTCTGGGGCACGATGATAAACAAGAATATGTTGTCCTCCCCACGGCAGTGGCAGGCTTG
GGGTCGGTGAAGGCTACCTATATCTCAACTGGCTATTGCTCCACCTTCGTCGTCACAGAC
AATGGCGATGTCTACTCCTTCGGGTGCGATCATTCGCGTAATCTGGGTGTTAAGGCGGAT
GTCGGCGAGGATGTCAGGATTCCCAAGCTAGCCGCCAATCTGAATGTTTCGCTGAATGAA
AAGGTTGTGCAGATTAGCGCGACCAACACCTGGGACTGGCCTAGCCGAAGCCAAAATCGG
ATTACCTCTGAATGTCATACATGCGTCCTCACCGAATCCGGCAGGCTCTACTCTCTCGGT
AGAGGTAGCGAGGGGCAGCTTGGTGTGAAGCTTGCTGAGGGACAGAAAATTAGGCCGGCC
CCAGATGGTGTCGCCATTGATCTCGACTAG

Peptide Sequence

PEP ID

OQU81821
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:49028748:49031424:-1 gene:SORBI_3006G124600 transcript:OQU81821 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTKCRFQMDTTDSKASVVTKVHNIVNESTSHSCPSLQQIPLTSNPSLLLHVLSSYGLEPK
DLAALEVACQFFRRPAKFEPDATLSLPELAAYDTCCQKAIFKSMEQKEKDSLKQRCGGSW
KLVLTYLLVGEKNYHRGKSRVVAGPGHTIAVTSKGDVYSFGANSSGQLGLGNTEEQCKPC
LIRSLQGIRITQAAVGSRRTMLVSDTGSVYVFGQDIFAGLEFAGDYTSSPKVVESLKGIF
VVQASVGGHFSAVLSREGQVYTFCWGHDARLGHHSDPTDLEPRLLSVPPKDALVMQIAAG
NCYLLMLVYQPTGMSVYSVGCGEGGKLGHGCTISLTIPRMIQQFKTLKVKPVSVSAGAFH
CAVLASDGRVFTWGWDSDTGCLGHDDKQEYVVLPTAVAGLGSVKATYISTGYCSTFVVTD
NGDVYSFGCDHSRNLGVKADVGEDVRIPKLAANLNVSLNEKVVQISATNTWDWPSRSQNR
ITSECHTCVLTESGRLYSLGRGSEGQLGVKLAEGQKIRPAPDGVAIDLD

Transcript Sequence

Transcript ID

OQU81821
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:49028748:49031424:-1 gene:SORBI_3006G124600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCTATTAACATCTGACCTCAATGTCATTATTTATTACTAATTGTTCTCTTACTCATTGAC
AGCTACTGATTTGTGTGTCTTTGTACAAATTACAGTACTCTTGTGTGACTAATAGTTTAG
TATACAATTGACTAGTCTGTTTGAAATCCATCAGCATAAAAACATGACACTACCTCGTTG
GCACATTATATTACTGGTCCAGATGTCTGTCCAAATTATGTGAAGATTTGTTTCTTTTCT
CCTAAGCTCTTGTCCTTGAAGGTTTAGAGCTCACAATTAAGGTACCTCAAGGTCATGACG
AAGTGCAGGTTCCAAATGGATACCACGGATAGCAAAGCATCCGTTGTTACAAAGGTCCAC
AACATTGTGAATGAGAGCACCTCCCACTCTTGTCCATCACTACAGCAAATCCCCCTCACT
TCAAATCCGTCCCTTCTCCTCCATGTGCTCTCTTCCTACGGGCTGGAACCCAAGGATCTG
GCTGCTTTGGAGGTTGCATGTCAATTCTTCAGAAGGCCTGCAAAGTTTGAGCCAGATGCC
ACGTTGTCTCTCCCTGAACTTGCAGCATATGATACTTGCTGCCAAAAGGCCATCTTTAAG
TCAATGGAGCAAAAGGAAAAAGACAGCTTGAAGCAGCGGTGCGGCGGCTCTTGGAAGCTT
GTCCTTACGTACCTGTTGGTCGGCGAGAAGAATTACCACCGTGGGAAATCTCGGGTTGTA
GCTGGACCAGGGCACACCATCGCTGTCACATCGAAGGGGGATGTGTACTCATTCGGCGCA
AATTCTTCAGGGCAGCTTGGGCTTGGGAATACAGAAGAACAGTGCAAACCATGCCTTATT
AGGTCTCTGCAGGGCATCAGAATCACACAAGCCGCAGTCGGTTCGAGGCGGACAATGCTT
GTAAGCGACACAGGAAGCGTGTATGTGTTTGGACAGGATATTTTCGCGGGTTTAGAATTT
GCTGGTGATTATACCAGTAGCCCTAAGGTTGTGGAGTCATTGAAAGGCATATTTGTAGTC
CAAGCATCTGTTGGAGGCCACTTCTCTGCAGTTCTGTCTAGAGAGGGTCAGGTTTACACT
TTCTGTTGGGGGCATGATGCAAGGCTTGGTCATCATTCAGATCCAACTGATCTCGAGCCT
CGCCTTCTCTCTGTACCGCCTAAGGATGCTCTTGTTATGCAGATTGCCGCGGGCAACTGC
TATCTCCTTATGTTGGTCTACCAACCTACTGGAATGTCGGTCTACTCAGTAGGGTGCGGT
GAAGGAGGCAAGCTTGGGCATGGATGCACGATAAGCCTGACGATCCCAAGGATGATCCAA
CAGTTCAAGACACTGAAGGTAAAACCGGTGTCGGTTTCAGCAGGCGCTTTCCATTGTGCA
GTTCTGGCAAGCGACGGACGTGTGTTCACCTGGGGATGGGACTCCGACACTGGTTGTCTG
GGGCACGATGATAAACAAGAATATGTTGTCCTCCCCACGGCAGTGGCAGGCTTGGGGTCG
GTGAAGGCTACCTATATCTCAACTGGCTATTGCTCCACCTTCGTCGTCACAGACAATGGC
GATGTCTACTCCTTCGGGTGCGATCATTCGCGTAATCTGGGTGTTAAGGCGGATGTCGGC
GAGGATGTCAGGATTCCCAAGCTAGCCGCCAATCTGAATGTTTCGCTGAATGAAAAGGTT
GTGCAGATTAGCGCGACCAACACCTGGGACTGGCCTAGCCGAAGCCAAAATCGGATTACC
TCTGAATGTCATACATGCGTCCTCACCGAATCCGGCAGGCTCTACTCTCTCGGTAGAGGT
AGCGAGGGGCAGCTTGGTGTGAAGCTTGCTGAGGGACAGAAAATTAGGCCGGCCCCAGAT
GGTGTCGCCATTGATCTCGACTAGTTCCATATTCACCGGCATCGACCTCAGCCATCTCCG
GCCTATGCTCCCCTGGTGCTGCAATCTAGCAGCTGGTGTTGGAACTTCCTGAAATGGTTT
GGAGTGTATGAATATTTATTTGCAAACATTTTAGCTCGTTTTAGATTCTTGACTATATTT
TAGCTCGTTTTAGATTCTTGACTATGAGGCTAGTTGGCTTCTTTTCTGGACAATGGACAG
ATCTATCACATGCCATTGCCATGGCTTTTGGTTGGTTTC