Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU81769
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:48405239:48406804:-1 gene:SORBI_3006G116300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGATCGTAAAATTCCCCAGCAGGGGAATCGCCTGCATCCGGCCTCCCCAAACCCTAGC
ATCCCGAATCCGCCGGTCGCCATGGCGCCGTTCCGGCGCTGGGCTGACCTGCCGCCGGAT
CTCCTCTGCCGCATCGGAGACCGCCTCGACCTCAAGTGGTATGCCAGCGCGCGGGGCGCC
TGCACGGCGTGGCGCTGCGCGCTCGCGCCGCCGTCGCCCGCGCTCCTCGTGGTCGCCGAC
GACGCCCGCTGGTGCCCCTACGCCGCCTCCCTCCCCACGCGGAGGTCCTTCGAGCTCACC
GCCATCGTCTCGGGAAGCCGCTGCGTCGGCTCCAGCAACGGCTGGCTCGCGCTCTCCGTC
GTCCTCTTCAGCGGCCAGAACGTCTTCGTGCTCCTCAACCCCATCGCCGCCGTGGAGATC
GTCCTCCCGCCGCTGATCTACGAGAGCCGCTGGGTTTCCAAGGTCGTCTTCACCCCGAGC
CCCGCCAAGGACGACTTCGCCGCCGCGGCAATCTGCGACATCGACAGGATCGCGTACGTC
ACCGCCGGTGCCAGGAGGTGGGCCGTCATGGAACCCGTCCGCCTCACCAGCGGGGACCAG
CTCACCGACGTCGTCTACACCGACAAAGGTAAGGTCTACTGCCTCACCAAGTGCGGGGAC
GTGCATGTGCTCCGCCTCCCTGAGCGCCGGCGCCGGAAGCCTGCCAACGCCGATGAAGCA
GGGACCTCGGAGCCAGAGTTTTCTGTTCTCCAGCCACCACAGCCTACTGAACGCATTAAT
TTCCGCCCACTGCGATGGCAACATCAGCGCAATTTTCGGATGCTGCGCTATGAACAGGCC
CGACCAAGAGAGGATCCAACTATTCCACTGAGGGTAACGTTCTGTGCAGAGACATTCATC
CCTTCCTATAAGAAAGTTCCTCCTGAATCGCAAGGACCACACCTAAATGCACCAGCCACT
GTTGAGCCCTTGTTGTCTGAGGCCAACCTCCCATTCAACCCTGCCACCGTCTTTGCTCCA
CCTTATGACACTGTGTCGTCCTTCACTAGTGCGAAGAACTTGGTGTTCTGTGAGGGCAAT
CTGTACCAAGTTTGGAGGAACGCAAGCTGCACTGTTACTCTGCAGCTGCCTGCAGGAGGT
CAGCGTCGCGTCGCGGAAAATGAGATATTGGTGCTTAGGTACTATCCTCGACGGCAGCCT
TGCTGGGATGTGGTGAAGGACCTGGGAGGTCACTCGCTTTTTGTGGGAAGGAACAATGCA
GTGTCAATGTATGCAGAGGGTGTGGCAGGACTGAGGGGCAACTGTGTATACTGGATTGGT
GGGCGTGGTAGGGATCAAGGCATGGTTTTTGACATGGAATCTGGGAGGTCCACACCATGC
AGGGCTCCTCCGGTTGGCTTTTTACCTGGGCATCCCCATAGCACAATCTGCTGGTACTTC
TTGAGTGATGTAATGAGCATCAACAACAGTTACAACACTAGCGTCAGCAGCAGCAGCAGT
GGAGGAAGAAAAGTTTATCAGACTCGAGCAAGAGCACGAGCAGATCTTGCAGACATGGAA
GAATGA

Peptide Sequence

PEP ID

OQU81769
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:48405239:48406804:-1 gene:SORBI_3006G116300 transcript:OQU81769 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDRKIPQQGNRLHPASPNPSIPNPPVAMAPFRRWADLPPDLLCRIGDRLDLKWYASARGA
CTAWRCALAPPSPALLVVADDARWCPYAASLPTRRSFELTAIVSGSRCVGSSNGWLALSV
VLFSGQNVFVLLNPIAAVEIVLPPLIYESRWVSKVVFTPSPAKDDFAAAAICDIDRIAYV
TAGARRWAVMEPVRLTSGDQLTDVVYTDKGKVYCLTKCGDVHVLRLPERRRRKPANADEA
GTSEPEFSVLQPPQPTERINFRPLRWQHQRNFRMLRYEQARPREDPTIPLRVTFCAETFI
PSYKKVPPESQGPHLNAPATVEPLLSEANLPFNPATVFAPPYDTVSSFTSAKNLVFCEGN
LYQVWRNASCTVTLQLPAGGQRRVAENEILVLRYYPRRQPCWDVVKDLGGHSLFVGRNNA
VSMYAEGVAGLRGNCVYWIGGRGRDQGMVFDMESGRSTPCRAPPVGFLPGHPHSTICWYF
LSDVMSINNSYNTSVSSSSSGGRKVYQTRARARADLADMEE

Transcript Sequence

Transcript ID

OQU81769
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:48405239:48406804:-1 gene:SORBI_3006G116300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGATCGTAAAATTCCCCAGCAGGGGAATCGCCTGCATCCGGCCTCCCCAAACCCTAGC
ATCCCGAATCCGCCGGTCGCCATGGCGCCGTTCCGGCGCTGGGCTGACCTGCCGCCGGAT
CTCCTCTGCCGCATCGGAGACCGCCTCGACCTCAAGTGGTATGCCAGCGCGCGGGGCGCC
TGCACGGCGTGGCGCTGCGCGCTCGCGCCGCCGTCGCCCGCGCTCCTCGTGGTCGCCGAC
GACGCCCGCTGGTGCCCCTACGCCGCCTCCCTCCCCACGCGGAGGTCCTTCGAGCTCACC
GCCATCGTCTCGGGAAGCCGCTGCGTCGGCTCCAGCAACGGCTGGCTCGCGCTCTCCGTC
GTCCTCTTCAGCGGCCAGAACGTCTTCGTGCTCCTCAACCCCATCGCCGCCGTGGAGATC
GTCCTCCCGCCGCTGATCTACGAGAGCCGCTGGGTTTCCAAGGTCGTCTTCACCCCGAGC
CCCGCCAAGGACGACTTCGCCGCCGCGGCAATCTGCGACATCGACAGGATCGCGTACGTC
ACCGCCGGTGCCAGGAGGTGGGCCGTCATGGAACCCGTCCGCCTCACCAGCGGGGACCAG
CTCACCGACGTCGTCTACACCGACAAAGGTAAGGTCTACTGCCTCACCAAGTGCGGGGAC
GTGCATGTGCTCCGCCTCCCTGAGCGCCGGCGCCGGAAGCCTGCCAACGCCGATGAAGCA
GGGACCTCGGAGCCAGAGTTTTCTGTTCTCCAGCCACCACAGCCTACTGAACGCATTAAT
TTCCGCCCACTGCGATGGCAACATCAGCGCAATTTTCGGATGCTGCGCTATGAACAGGCC
CGACCAAGAGAGGATCCAACTATTCCACTGAGGGTAACGTTCTGTGCAGAGACATTCATC
CCTTCCTATAAGAAAGTTCCTCCTGAATCGCAAGGACCACACCTAAATGCACCAGCCACT
GTTGAGCCCTTGTTGTCTGAGGCCAACCTCCCATTCAACCCTGCCACCGTCTTTGCTCCA
CCTTATGACACTGTGTCGTCCTTCACTAGTGCGAAGAACTTGGTGTTCTGTGAGGGCAAT
CTGTACCAAGTTTGGAGGAACGCAAGCTGCACTGTTACTCTGCAGCTGCCTGCAGGAGGT
CAGCGTCGCGTCGCGGAAAATGAGATATTGGTGCTTAGGTACTATCCTCGACGGCAGCCT
TGCTGGGATGTGGTGAAGGACCTGGGAGGTCACTCGCTTTTTGTGGGAAGGAACAATGCA
GTGTCAATGTATGCAGAGGGTGTGGCAGGACTGAGGGGCAACTGTGTATACTGGATTGGT
GGGCGTGGTAGGGATCAAGGCATGGTTTTTGACATGGAATCTGGGAGGTCCACACCATGC
AGGGCTCCTCCGGTTGGCTTTTTACCTGGGCATCCCCATAGCACAATCTGCTGGTACTTC
TTGAGTGATGTAATGAGCATCAACAACAGTTACAACACTAGCGTCAGCAGCAGCAGCAGT
GGAGGAAGAAAAGTTTATCAGACTCGAGCAAGAGCACGAGCAGATCTTGCAGACATGGAA
GAATGA