Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU81746
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:48074729:48079971:-1 gene:SORBI_3006G112500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAGATGCAGGGCCGCCTCCGGCGCGTCCTCCGGGCGCCGCCGCCTAGAATCCTACTC
TACCGCGCGATCTCCTCCCCGCCGCCCGGAGGCAACGGCGGTGGCGGTGGCGATGGTGGC
AGCGGGGTGGCGGTGAAGCAGGTGACGCGGGGGAACATGGCGGAGGCCCTGGAGAAGCTG
CGGGGACGCGTGCGGGAGGCCGCATTCGTAGGGGTGGACCTGGAGATGAGCGGCGTCACG
AGCGCGCCCTGGAGAGACACCTTCGAGTTCGACCGCGCCGACGTGCGCTACCTCAAACTC
CGCGACTCCGCGGAGCGGTTCGCCGCCCTACAGCTCGGCGTCTGCCCCTTCCGATGGGAC
CCTGCCAAGTCCGCCTTCGTTGCCCATCCGCATAACTTCTTTATCTTCCCTCGCAAGGAG
CTCCCTAGTGATTGTTCATCTCATGAGTTTCTTTGTCAGACAACTTCAATTGACTTCCTA
GCAAAGTACCAGTTTGATTTCAACACATGCTTCCGTGAAGGAATATCTTATCTATCCAGA
GCACAAGAGGAAGAGGCGCTACAGAAATTTAATACATTGCATCATGAAAGGATGAAAATG
AACTTCAAGGAATGGCGTGATGTGATAGTCAGCAAGCCAATGGTTGACAACCATTTGTCA
GTAAACATTAAATGTGGTGCAGGACAATTCCAGACAGTTTTCTTCAAAATGCGCCCAGCT
ATTATGCTTAATGGATTCTCATCCCATCAATTGAAGTTAATTCAACAGGTTTTGAGAAAA
AACTTTAGGGATCTTGTTTTTGTCTGTACATTTGGTGAGGATGACACATCTGAAAAGAAA
GTAGTTTATTCAGACACTGATGAGGACAGAATGTTATTAATGAAAGATGTGCAGGAAGAT
CAACTAAAAAACAGGGAAGAAAGAGTCAAATCAGCAATAGGAATCCGCCATGTCATCGAC
CTTCTTTCATCAGAAAGGAAATTGATTATTGGACATAGTTGTTTCCTAGATATTGCCCAA
GTGTACAGCAAGTTTGTAGGTCCTCTTCCATCATCTATCAAGGAATTTGCGTTAAGTTTC
CACAAAATTTTCCCACACATTGCAGATACCAGGCATCTTTTGTCTGTCAATCAAGCAGTT
CAGGAACTGATGAAGCAGAAAAGCAAATCACTATCTTCAGCTTTCTCATTGTTGTGCCCT
GCATCTTATTCATCGGCTGAGAAGGCATCCAGTCATTCTCCTGTGACAATTGAAGTTGAA
GGAGATGAAACGACGTCTTCTTCCTTCATTTCAGGTGCCAAGCATGAAGCTGGATATGAT
GCATACATGACTGGATGTATTTTTGCGCAGTTGTGTGCTTATCTTGGCATAAAATTTGAG
CAGTTCTCACCTCTGGATGACCTAGCAACGAACACTAGGCTGCAGAAACACATCAATTTT
TTGTCCCCTAGCTGGAACAGTGGAACAGTGATTGATTTGAGCACTGGCATGGAGAGACCA
GATCCAGGTTATATGAGAAGGTACCCTGCTGCTGTGTATGATAACATCGTTGTCATTTGG
GGATTCATGTCTAAGGTTAGACCAAAGGAAATTAAGGATTGCATCTGCAAAGTATTTGGT
TCAGGTTCGGTTACAACCGTCTTCTCCATTGATTCCACTGCTGCCCTTGTGCAGTTCAAG
AAACAAGAGTCCGTAAACGATTTCTTGGATTTGAAGTCTGCTTTGGAGAGGGCAGATAGT
GCTGTCTTAATTCTACACCCCCTGTCAACTATATTGGAAGGAGGCCAAACACGAGCTGCA
AAGTATGATACCTACAGAGACATCTGCAGCTCTTCTGAATCAAAATCTCTCTTTGCTGAT
CAAGCTGAAGCAGTTTGTGCAACTTCAAAGAATCAATTCAAAGAAAATGTTGATGATAAT
CTTATATCTGGTGTTCTTGATGGATTTGCACTCACCTCTGAAACTGAGGGAGATGGAATA
TTATCGGGTTCCAAGAATCAAGACGTTGCTGATGTTACATGTCACGATATTTTAGATGCT
CTACACGATGGCAAAGCATTGTTGGGCAGACGAATGTGA

Peptide Sequence

PEP ID

OQU81746
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:48074729:48079971:-1 gene:SORBI_3006G112500 transcript:OQU81746 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MQMQGRLRRVLRAPPPRILLYRAISSPPPGGNGGGGGDGGSGVAVKQVTRGNMAEALEKL
RGRVREAAFVGVDLEMSGVTSAPWRDTFEFDRADVRYLKLRDSAERFAALQLGVCPFRWD
PAKSAFVAHPHNFFIFPRKELPSDCSSHEFLCQTTSIDFLAKYQFDFNTCFREGISYLSR
AQEEEALQKFNTLHHERMKMNFKEWRDVIVSKPMVDNHLSVNIKCGAGQFQTVFFKMRPA
IMLNGFSSHQLKLIQQVLRKNFRDLVFVCTFGEDDTSEKKVVYSDTDEDRMLLMKDVQED
QLKNREERVKSAIGIRHVIDLLSSERKLIIGHSCFLDIAQVYSKFVGPLPSSIKEFALSF
HKIFPHIADTRHLLSVNQAVQELMKQKSKSLSSAFSLLCPASYSSAEKASSHSPVTIEVE
GDETTSSSFISGAKHEAGYDAYMTGCIFAQLCAYLGIKFEQFSPLDDLATNTRLQKHINF
LSPSWNSGTVIDLSTGMERPDPGYMRRYPAAVYDNIVVIWGFMSKVRPKEIKDCICKVFG
SGSVTTVFSIDSTAALVQFKKQESVNDFLDLKSALERADSAVLILHPLSTILEGGQTRAA
KYDTYRDICSSSESKSLFADQAEAVCATSKNQFKENVDDNLISGVLDGFALTSETEGDGI
LSGSKNQDVADVTCHDILDALHDGKALLGRRM

Transcript Sequence

Transcript ID

OQU81746
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:48074729:48079971:-1 gene:SORBI_3006G112500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCATCCATCCATCAAACCAAATCAAGCCCAACGCACCGCCGCGTGCCTCCACCGCTCCAC
CCTCTCTCTCCAGCGACGGCGGCGGCCATGCAGATGCAGGGCCGCCTCCGGCGCGTCCTC
CGGGCGCCGCCGCCTAGAATCCTACTCTACCGCGCGATCTCCTCCCCGCCGCCCGGAGGC
AACGGCGGTGGCGGTGGCGATGGTGGCAGCGGGGTGGCGGTGAAGCAGGTGACGCGGGGG
AACATGGCGGAGGCCCTGGAGAAGCTGCGGGGACGCGTGCGGGAGGCCGCATTCGTAGGG
GTGGACCTGGAGATGAGCGGCGTCACGAGCGCGCCCTGGAGAGACACCTTCGAGTTCGAC
CGCGCCGACGTGCGCTACCTCAAACTCCGCGACTCCGCGGAGCGGTTCGCCGCCCTACAG
CTCGGCGTCTGCCCCTTCCGATGGGACCCTGCCAAGTCCGCCTTCGTTGCCCATCCGCAT
AACTTCTTTATCTTCCCTCGCAAGGAGCTCCCTAGTGATTGTTCATCTCATGAGTTTCTT
TGTCAGACAACTTCAATTGACTTCCTAGCAAAGTACCAGTTTGATTTCAACACATGCTTC
CGTGAAGGAATATCTTATCTATCCAGAGCACAAGAGGAAGAGGCGCTACAGAAATTTAAT
ACATTGCATCATGAAAGGATGAAAATGAACTTCAAGGAATGGCGTGATGTGATAGTCAGC
AAGCCAATGGTTGACAACCATTTGTCAGTAAACATTAAATGTGGTGCAGGACAATTCCAG
ACAGTTTTCTTCAAAATGCGCCCAGCTATTATGCTTAATGGATTCTCATCCCATCAATTG
AAGTTAATTCAACAGGTTTTGAGAAAAAACTTTAGGGATCTTGTTTTTGTCTGTACATTT
GGTGAGGATGACACATCTGAAAAGAAAGTAGTTTATTCAGACACTGATGAGGACAGAATG
TTATTAATGAAAGATGTGCAGGAAGATCAACTAAAAAACAGGGAAGAAAGAGTCAAATCA
GCAATAGGAATCCGCCATGTCATCGACCTTCTTTCATCAGAAAGGAAATTGATTATTGGA
CATAGTTGTTTCCTAGATATTGCCCAAGTGTACAGCAAGTTTGTAGGTCCTCTTCCATCA
TCTATCAAGGAATTTGCGTTAAGTTTCCACAAAATTTTCCCACACATTGCAGATACCAGG
CATCTTTTGTCTGTCAATCAAGCAGTTCAGGAACTGATGAAGCAGAAAAGCAAATCACTA
TCTTCAGCTTTCTCATTGTTGTGCCCTGCATCTTATTCATCGGCTGAGAAGGCATCCAGT
CATTCTCCTGTGACAATTGAAGTTGAAGGAGATGAAACGACGTCTTCTTCCTTCATTTCA
GGTGCCAAGCATGAAGCTGGATATGATGCATACATGACTGGATGTATTTTTGCGCAGTTG
TGTGCTTATCTTGGCATAAAATTTGAGCAGTTCTCACCTCTGGATGACCTAGCAACGAAC
ACTAGGCTGCAGAAACACATCAATTTTTTGTCCCCTAGCTGGAACAGTGGAACAGTGATT
GATTTGAGCACTGGCATGGAGAGACCAGATCCAGGTTATATGAGAAGGTACCCTGCTGCT
GTGTATGATAACATCGTTGTCATTTGGGGATTCATGTCTAAGGTTAGACCAAAGGAAATT
AAGGATTGCATCTGCAAAGTATTTGGTTCAGGTTCGGTTACAACCGTCTTCTCCATTGAT
TCCACTGCTGCCCTTGTGCAGTTCAAGAAACAAGAGTCCGTAAACGATTTCTTGGATTTG
AAGTCTGCTTTGGAGAGGGCAGATAGTGCTGTCTTAATTCTACACCCCCTGTCAACTATA
TTGGAAGGAGGCCAAACACGAGCTGCAAAGTATGATACCTACAGAGACATCTGCAGCTCT
TCTGAATCAAAATCTCTCTTTGCTGATCAAGCTGAAGCAGTTTGTGCAACTTCAAAGAAT
CAATTCAAAGAAAATGTTGATGATAATCTTATATCTGGTGTTCTTGATGGATTTGCACTC
ACCTCTGAAACTGAGGGAGATGGAATATTATCGGGTTCCAAGAATCAAGACGTTGCTGAT
GTTACATGTCACGATATTTTAGATGCTCTACACGATGGCAAAGCATTGTTGGGCAGACGA
ATGTGAAGCTGTTATGGGGCATCAATTAGGGGCACAGGGGCCACAGGATCAATTAGAGGC
ATTTGATGAGTTACAGATAGGATTAGATTTGGGTCAATTAGAGATAGGATTGGATATGAT
TTGTTACGATTTGATTAGGCCTTCCTTAGGTGGCCTGGGGTCCTCTCTCTATAAGAGAGG
TGAGGTGATGTACCAAGGAGGGGAATGAAGAAAAAACAAACAATCCGATTCCCCCAAATA
CTCTAGAGCCTGTTCGCAGTCTCCCTTCATGCTGACTTTGTTCGGCCATCTTCGTGGCAA
CAGTTATCCATATCCCCAAATGATCTGAGGATCAGAACAGAAGCTAATTATTACCGTCGG
CCTTTTTCAGCAGGTTATTGGCCTGGCCTTTTATTTGAGGCTCACGGATTACTCTAATGT
TTTTTATGAGTATT