Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU81698
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:47408223:47411259:-1 gene:SORBI_3006G104300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTACGGCGGCAATGAGTCGCTGAAAGCACGGGGCGCGCTCTCCATAGCAGTCCCCGGG
GAGATCGCCGGCCTGTACGAGGCGTGGAAGCACCACGGCAAGCTCCCATGGAGGCGCCTC
GTCCTGCCGGCCGCGCGGCTCGCCCTGGCGTTCAGGATCTCGCCGTACCTGCGGATGCAG
ATGGAGGCGACCAGGGACGGCATCCTGGGCAACAACGGGACGCGGGCCGTGTACGCGCCG
GGCGGCGACATCCTCAGGGCCGGGGACATGTGCCGCAACCGGAGGCTCGCCCAGACCCTG
CGGGCCGTCGCGGAGCACGGGCCCGGCGTGTTCTACGGCGGCGCCGTGGGGGCGCGGCTC
GTGAGGGACGTCCGGGAGGCCGGAGGGATCCTGACGGTGGAGGACCTGAAGAGGTACCAG
GTGAAGGTGCGGCAGCCGCTGACGGAGAACGTGATGGGGCTCGAGGTGGTGACCATGCCC
CCGCCTTCCGCCGGCGGTGCCGGGATGATGCTTGTCCTGAACATCCTTGATCAGTTTGGC
ATTCCTGCTGGTTTCGCTGGATCTCTTGGGATTCACCGTCTCATCGAGTCCTTGAAACAT
TACATGGCGGTAAAGATGAACCTCGGCGATCCTGACTTTGTGAACGATAACGAGGTTGTG
TCTGATATGATTTCCCCCAAATTTGCTGCTGAACTGAAGAAAACCATCTATGACAACATG
ACATTTGCGCCTAAACATTACGGTGGAAGGTGGAACATCCTTCAGGACCATGGAACGAGC
CACTTGTCCATCGTCGACAGCGAGCGAAACGCGGTTTCGATGACGAGCACCGTCAACTCG
TACTTCGGGTCACTGATCCATTCCCCACGCACAGGCATCCTGCTCAACAACGAGATGGAC
GACTTCTCCATGCCGGCGAACACGACGGAGAATTCTCCACCCCCAGCACCTGCCAATTTC
GTCAGCCCCATGAAACGGCCTCTCTCTTCCATGACTCCGACCATAGTTGTCAAGGACGGG
AAGCTGGTGTCCGCAGTTGGTGCCAGTGGTGGCAGCATGATCCCCGCTGGAACGATCGAG
GTGTTCATCAACCATTTCGTCAAGAACATGGATCCATTGGCTTCTGTCATGGCGCCAAGG
GTTTATCACCAGCTGATCCCAAACGAGGTCAAGTACGAGAACTGGACGACGGTGACCGGC
GACCACTTCGAGCTCGACGCCGCGACGAGGGCCGACCTGCAGAAGAGAGGCCACGTCCTG
AAGCCGCTAGCCGGTGGAACCATAAGCCAGCTCGTGGTGCACAACGTCGGGCGCCAAGGC
GACCTGACCGCCGTCAGTGACCCCAGAAAAGGCGGTGTCCCGGCCGGTTACTGA

Peptide Sequence

PEP ID

OQU81698
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:47408223:47411259:-1 gene:SORBI_3006G104300 transcript:OQU81698 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MYGGNESLKARGALSIAVPGEIAGLYEAWKHHGKLPWRRLVLPAARLALAFRISPYLRMQ
MEATRDGILGNNGTRAVYAPGGDILRAGDMCRNRRLAQTLRAVAEHGPGVFYGGAVGARL
VRDVREAGGILTVEDLKRYQVKVRQPLTENVMGLEVVTMPPPSAGGAGMMLVLNILDQFG
IPAGFAGSLGIHRLIESLKHYMAVKMNLGDPDFVNDNEVVSDMISPKFAAELKKTIYDNM
TFAPKHYGGRWNILQDHGTSHLSIVDSERNAVSMTSTVNSYFGSLIHSPRTGILLNNEMD
DFSMPANTTENSPPPAPANFVSPMKRPLSSMTPTIVVKDGKLVSAVGASGGSMIPAGTIE
VFINHFVKNMDPLASVMAPRVYHQLIPNEVKYENWTTVTGDHFELDAATRADLQKRGHVL
KPLAGGTISQLVVHNVGRQGDLTAVSDPRKGGVPAGY

Transcript Sequence

Transcript ID

OQU81698
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:47408223:47411259:-1 gene:SORBI_3006G104300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GATCTTCCACTGTGTTATATATGAGTAATTTGAGTGCAAACTTTGGATTTAATTTGCATT
ATCTTTCATAATAAAAATGGTGAGTAATTTATAAAAATTTTAGTGGGTGAGACATTTTAT
ATTATCTTTATAATGATGGAGGTGGATTATTTAGATACAAATTTAGGGAGTTATTTTGAA
TTATCTTTCATCATGGCAAAGATGTGTAATTAAGATACAAATTGGAGGGGGGGTGTTTGA
ATTATCTTTCGTAATGATGGAGATGAGTAATCTAGATGCAAAATTAGAAGGCTACTTTAA
GTATTTTTCATAATGACAGAGGCGGGTATTTTTTTTTTAAAAAAAAGAACATAATGATCT
AGTGTCGTTATTGTAGATGATGATTAATTAAAGGTTAGATGTTTTTTTATTATTGTGAGA
ATATTTAGAATTGTTTCTTGTCTAGTGTGTCTGGTGAGAATTAACATGAAGTTTACATTG
AAAGTCTCTGATTAGTAATAGTACGATAAGAGAAGATGGTAAAATATATCTTCCTAATTT
TATATGACCTTGACCAAACTTATGATAGTTTGACTTATGGATAACTTTATAAGAACGAGT
GACTATGAGATCCAGCTCGCGTCTTTTCCTTACAACAAGGGAGGGGAGTGACACTGCAAC
TAGTTTCAGTTTTGAATTTGAGTCCTGAGCACTAAGCAGAGTAATGACGTTTATAATAAG
AAATTAGAGAAACGGCACTCGATCGCCCAGCGTTTTCTTTGTCACTTCCTCCATGTTCGT
TCCAGTGTTATTCCTGTATCGATTGTTCTTCCAAGATCGAGAGACTGAACACTAGAAACG
TGAACCATGCATTCAGGACATGTACGGCGGCAATGAGTCGCTGAAAGCACGGGGCGCGCT
CTCCATAGCAGTCCCCGGGGAGATCGCCGGCCTGTACGAGGCGTGGAAGCACCACGGCAA
GCTCCCATGGAGGCGCCTCGTCCTGCCGGCCGCGCGGCTCGCCCTGGCGTTCAGGATCTC
GCCGTACCTGCGGATGCAGATGGAGGCGACCAGGGACGGCATCCTGGGCAACAACGGGAC
GCGGGCCGTGTACGCGCCGGGCGGCGACATCCTCAGGGCCGGGGACATGTGCCGCAACCG
GAGGCTCGCCCAGACCCTGCGGGCCGTCGCGGAGCACGGGCCCGGCGTGTTCTACGGCGG
CGCCGTGGGGGCGCGGCTCGTGAGGGACGTCCGGGAGGCCGGAGGGATCCTGACGGTGGA
GGACCTGAAGAGGTACCAGGTGAAGGTGCGGCAGCCGCTGACGGAGAACGTGATGGGGCT
CGAGGTGGTGACCATGCCCCCGCCTTCCGCCGGCGGTGCCGGGATGATGCTTGTCCTGAA
CATCCTTGATCAGTTTGGCATTCCTGCTGGTTTCGCTGGATCTCTTGGGATTCACCGTCT
CATCGAGTCCTTGAAACATTACATGGCGGTAAAGATGAACCTCGGCGATCCTGACTTTGT
GAACGATAACGAGGTTGTGTCTGATATGATTTCCCCCAAATTTGCTGCTGAACTGAAGAA
AACCATCTATGACAACATGACATTTGCGCCTAAACATTACGGTGGAAGGTGGAACATCCT
TCAGGACCATGGAACGAGCCACTTGTCCATCGTCGACAGCGAGCGAAACGCGGTTTCGAT
GACGAGCACCGTCAACTCGTACTTCGGGTCACTGATCCATTCCCCACGCACAGGCATCCT
GCTCAACAACGAGATGGACGACTTCTCCATGCCGGCGAACACGACGGAGAATTCTCCACC
CCCAGCACCTGCCAATTTCGTCAGCCCCATGAAACGGCCTCTCTCTTCCATGACTCCGAC
CATAGTTGTCAAGGACGGGAAGCTGGTGTCCGCAGTTGGTGCCAGTGGTGGCAGCATGAT
CCCCGCTGGAACGATCGAGGTGTTCATCAACCATTTCGTCAAGAACATGGATCCATTGGC
TTCTGTCATGGCGCCAAGGGTTTATCACCAGCTGATCCCAAACGAGGTCAAGTACGAGAA
CTGGACGACGGTGACCGGCGACCACTTCGAGCTCGACGCCGCGACGAGGGCCGACCTGCA
GAAGAGAGGCCACGTCCTGAAGCCGCTAGCCGGTGGAACCATAAGCCAGCTCGTGGTGCA
CAACGTCGGGCGCCAAGGCGACCTGACCGCCGTCAGTGACCCCAGAAAAGGCGGTGTCCC
GGCCGGTTACTGAGCAGGATCTCTGTCGAAGCACGGTGAAGTAGCCCGGCCGTGCTGATG
CCTGTGTGACGTGAGACGGAGTCAGGAGTTATACATAGATACGATGGATTAAAGACATTT
GACATATGCAAGCTGGACGTAGCTCATCTGTTTAGGCTCTTGTGGTGGGACATGGCAACT
CGAGTTAATCATCGATTCAGCTATTCCTATTTTTCTATGTTTATTTATTTTAGTATTTGA
TAATTTAACAATGGTATTTGTCCCACAGCAGCGTGT