Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU81682
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:47103583:47105871:-1 gene:SORBI_3006G100700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAGCTGGGATTCGCCTCGCAGATCCGGCTCCTTCGAGGCCGGCCTCAGGGTCAGGGGT
GCCGCCACAGCCACCGCCTCGTCGTCCGTTTCCAGAGACCGCAAGCCGTCGTCCCCTCGC
CTCCACCGCAGCCGCTCATCCGCCGGCGCCGGCGGCGGTGCCTCCAAGGCGCCCTCGTCA
CCGGAGAGGCGGCGCGGCGTTGGCGGCATGGGCGCGATGCAGCAGCAGCAGCGGGTGGCG
CAGCTGGAGGAGGAGCTCCGGCGGGAGCGGGAGGACAAGGCGCGAGCCGTGAGGGAGCTC
GATGACCTGAGGCGGGGACGCGAGGACGGCGCCAGGGCCGTCGCGGAGAAGGTGCAGCTT
CTGGAGCGGGAGGTGGGCAAGTCCAAGGAGTCGGAGCGCAAGATGCTGGAGTCGCTGATA
TACCAGACGAAGCAGCTGGAGCAGACCAAGATCTCGCTCGAGGAGGCCAAGCTGGAGATC
GCCACGCTGCAGCAGGCCAACAAGAGCCTCGAGGCCGCGTCCGCGTCCGCCCGAGGCCGC
GGCGGCGGCGGCGTGGAGCAGCAGAGGACGAGCGTCAAGGACCTCATGTTCGGCGGCGCG
GACGAGGAGATCAGGGTCCTGCGCGGCGAGCTCCGCACGGCGATGCAGGGCGAGGAGCGG
AGCCGCAAGGCGGCGGACGACCTCTCCGTCGCGCTCTCCGACGTCACCATGGAGGCCAAA
CAGGTCAAGGTGTGGCTCGCCGAGGCGCAGGCCGAGCTGGAGGCCGCCAACGCCGAGGCC
GAGCGGCTGCGCGCGGCGCTGGCCGACGCCGAGGCCGAGGTCCGCGCCGTGGCCGCCGAG
CGCGACCGGTGCAGGCTCGAGGCCGACGAGTGCGTCGCGGCGTGGGGCGACAAGGAGCGC
GTCTTCCTCGACTGCGTGCGCGCGTCCGAGGACGACGTGAACCGGGCGCGCCAGGAGAAC
ACCAAGCTGGTCGAGTCGCAGCGCGTCATCCGCGACGAGAACGCGCGACTGCGGGACATC
CTCAAGCAGGCCGTCGCCGAGGCCAACGTCGTCAAGGACTCGCTCCAGCTCGCCAGGGCC
GAGAACGCGCGCCTCAACGACGCCGTCGCGGAGAAGGAGAGCGCGCTGCAGAGCCTCCGC
CAGGAGTACGAGTGCATCAAGGTCAGCGAGGCCGCGGCGCAGGGTAGCCTCAAGGAGCTC
AACAGCCTCCTCGCCGCCACCACGACGACGACGACGACCACGGCGTGCAGCACGCCCGCG
TCCGCCAAGACCGCCCCCGCGCCGGACTACGCCTTCGACCAGCGCCTGCCAGCAAATGGT
ATTGGCAGCAAGAACGGGACGCCGCAGTCGTCGTCGCAGCGGTGGATGGCAGACAAGCCA
CGCACGCCGAGCAGCCGCCGGAGGTACTCGATCGGCGAGCCGGGGAAGCTGAAGACGGGC
CTCTCGCAGTCGGCGCGGATGGGGAACCTGAACCCCAAGGACCGGGTGTTCGCGTCGCTG
AGCAACATTGCTGACCTCAAGTCCGCAGCAGACGCGGCGGCGATGGAGGACTTCGACGAC
GAGTTCGATCACGTCGACGAGAGGCACTACGTTGACATGGACGATTCCATGAAGCACAAG
AAGAAGAGGCCGATATTCCGCAAGTTCGGCGATTTGTTTTGCAGGAGGAAAAGCTTCTAC
AAGCCAAATTTAGCGCCAGTACACACACTCTAA

Peptide Sequence

PEP ID

OQU81682
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:47103583:47105871:-1 gene:SORBI_3006G100700 transcript:OQU81682 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSWDSPRRSGSFEAGLRVRGAATATASSSVSRDRKPSSPRLHRSRSSAGAGGGASKAPSS
PERRRGVGGMGAMQQQQRVAQLEEELRREREDKARAVRELDDLRRGREDGARAVAEKVQL
LEREVGKSKESERKMLESLIYQTKQLEQTKISLEEAKLEIATLQQANKSLEAASASARGR
GGGGVEQQRTSVKDLMFGGADEEIRVLRGELRTAMQGEERSRKAADDLSVALSDVTMEAK
QVKVWLAEAQAELEAANAEAERLRAALADAEAEVRAVAAERDRCRLEADECVAAWGDKER
VFLDCVRASEDDVNRARQENTKLVESQRVIRDENARLRDILKQAVAEANVVKDSLQLARA
ENARLNDAVAEKESALQSLRQEYECIKVSEAAAQGSLKELNSLLAATTTTTTTTACSTPA
SAKTAPAPDYAFDQRLPANGIGSKNGTPQSSSQRWMADKPRTPSSRRRYSIGEPGKLKTG
LSQSARMGNLNPKDRVFASLSNIADLKSAADAAAMEDFDDEFDHVDERHYVDMDDSMKHK
KKRPIFRKFGDLFCRRKSFYKPNLAPVHTL

Transcript Sequence

Transcript ID

OQU81682
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:47103583:47105871:-1 gene:SORBI_3006G100700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTTCCCGTCCGTCCCCGGCGGTGGTCGCCTGGTGGTATTAATTGCGCCATGTCGTGCCAG
GCCTTCTTCTATTCCGTTCCCCTCTGACACGGATCTCTTTCTTTTTCCCCGGCCTGCCTC
GGAGTCCGCGCCGCCCGCCGCGTGCCCGAGATGCTGTCCGCCAGGCCGAGGTGAGTGAGA
ATTCAGACGACACCCCCTGAGGCCCTGACTGGCTACTTGGCACGCGCGCGCCTCCTTCTT
CTATAGTAGAATCGATCCTTCTTTCCCGGCTCGGCTCGGGGAGTCGGGGATCCTCTCCGT
CTGTTGCCACTGCGTCTGTGCGTTCTTTTATTGTTTTGACTATTTAGCCCGGCGATACGG
TTTCATGAGCTGGGATTCGCCTCGCAGATCCGGCTCCTTCGAGGCCGGCCTCAGGGTCAG
GGGTGCCGCCACAGCCACCGCCTCGTCGTCCGTTTCCAGAGACCGCAAGCCGTCGTCCCC
TCGCCTCCACCGCAGCCGCTCATCCGCCGGCGCCGGCGGCGGTGCCTCCAAGGCGCCCTC
GTCACCGGAGAGGCGGCGCGGCGTTGGCGGCATGGGCGCGATGCAGCAGCAGCAGCGGGT
GGCGCAGCTGGAGGAGGAGCTCCGGCGGGAGCGGGAGGACAAGGCGCGAGCCGTGAGGGA
GCTCGATGACCTGAGGCGGGGACGCGAGGACGGCGCCAGGGCCGTCGCGGAGAAGGTGCA
GCTTCTGGAGCGGGAGGTGGGCAAGTCCAAGGAGTCGGAGCGCAAGATGCTGGAGTCGCT
GATATACCAGACGAAGCAGCTGGAGCAGACCAAGATCTCGCTCGAGGAGGCCAAGCTGGA
GATCGCCACGCTGCAGCAGGCCAACAAGAGCCTCGAGGCCGCGTCCGCGTCCGCCCGAGG
CCGCGGCGGCGGCGGCGTGGAGCAGCAGAGGACGAGCGTCAAGGACCTCATGTTCGGCGG
CGCGGACGAGGAGATCAGGGTCCTGCGCGGCGAGCTCCGCACGGCGATGCAGGGCGAGGA
GCGGAGCCGCAAGGCGGCGGACGACCTCTCCGTCGCGCTCTCCGACGTCACCATGGAGGC
CAAACAGGTCAAGGTGTGGCTCGCCGAGGCGCAGGCCGAGCTGGAGGCCGCCAACGCCGA
GGCCGAGCGGCTGCGCGCGGCGCTGGCCGACGCCGAGGCCGAGGTCCGCGCCGTGGCCGC
CGAGCGCGACCGGTGCAGGCTCGAGGCCGACGAGTGCGTCGCGGCGTGGGGCGACAAGGA
GCGCGTCTTCCTCGACTGCGTGCGCGCGTCCGAGGACGACGTGAACCGGGCGCGCCAGGA
GAACACCAAGCTGGTCGAGTCGCAGCGCGTCATCCGCGACGAGAACGCGCGACTGCGGGA
CATCCTCAAGCAGGCCGTCGCCGAGGCCAACGTCGTCAAGGACTCGCTCCAGCTCGCCAG
GGCCGAGAACGCGCGCCTCAACGACGCCGTCGCGGAGAAGGAGAGCGCGCTGCAGAGCCT
CCGCCAGGAGTACGAGTGCATCAAGGTCAGCGAGGCCGCGGCGCAGGGTAGCCTCAAGGA
GCTCAACAGCCTCCTCGCCGCCACCACGACGACGACGACGACCACGGCGTGCAGCACGCC
CGCGTCCGCCAAGACCGCCCCCGCGCCGGACTACGCCTTCGACCAGCGCCTGCCAGCAAA
TGGTATTGGCAGCAAGAACGGGACGCCGCAGTCGTCGTCGCAGCGGTGGATGGCAGACAA
GCCACGCACGCCGAGCAGCCGCCGGAGGTACTCGATCGGCGAGCCGGGGAAGCTGAAGAC
GGGCCTCTCGCAGTCGGCGCGGATGGGGAACCTGAACCCCAAGGACCGGGTGTTCGCGTC
GCTGAGCAACATTGCTGACCTCAAGTCCGCAGCAGACGCGGCGGCGATGGAGGACTTCGA
CGACGAGTTCGATCACGTCGACGAGAGGCACTACGTTGACATGGACGATTCCATGAAGCA
CAAGAAGAAGAGGCCGATATTCCGCAAGTTCGGCGATTTGTTTTGCAGGAGGAAAAGCTT
CTACAAGCCAAATTTAGCGCCAGTACACACACTCTAA