Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU81647
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:46196936:46200229:-1 gene:SORBI_3006G091850 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGGGCTGCTCCAAGACGACCGCCGGCGCGGGGGTGGCCGGCCTCCCTGACGACCCC
GTGCTGGAGATCCTGTCCCGCGTCCCTGCCAAGTCCGTCTGCCGGTTCAAGTGCGTGTCC
AAGGCCTGGCGCGACCTCATCGCCGACCCTAACAACCGTAAGAGGCTCCGCCACGCCATG
CAGGGATTGTTTGTCCAGACGTACGCGGATGAATTGGATGACGAGGAATTGGGCAAGGAT
GACTTGGGCCGTATCAGGTTCCGTTTCATCAACCTGACAGCAGTGAGATCCGTGCCTCTG
GACATCGACCCTTGCTTCTCCTTCCTGACGGAAATGACTGGGATCAAGGCCTTCTTGTTG
GATTCCTGCAATGGGCTTATCCTTTTCGGGCAGAGTCAGGATCCGTCTCTCCTATTGCTA
TTGGATGGCTATATCGTGTGCAACCCAACCACAAGGCAATGGTCTGCTGTGCCTGCTTGC
GGCTCTAGGGAAGCGATAAGCCACACCTATTTGGCTTTCGATCCGGTTGTATCCTCTCAC
TTTCACTTGGTCCAGCTCCAGATTCCTGATGTGCAAGAGAATGTAGTGTCGTTGCATGTT
TACTCGTCTGAAACTGGGACTTGGAGTCACAACCAAATTGACAAACAAAAAGAGCAAGGA
CAATTGGAAGGGTGGCATCATCAGTTTACACTAGACCCTCTTCAGCATCAGTGTGCCTTT
GTTAATGGCTTCCTACATCTGATAGTTTGGGGCTCAAATGTACATCACATACTTGCTGTA
GATGTACAAGGGAAGGCAAGAAGGATGATCACTGTGCCAGGTCTGGCTGATGGGAGACAC
GAGCACAACTTTGTTTGTTATTTCGGTCAATCCCAAGGGCACCTACATTGCATGATTCTA
GAGTCTGCTGATAAAAAGAATGTGGAACTATCCACCTGGGTTCTTCAGGATTATGATACA
CAAGAATGGGTGTTGAAAAACACTGTGAACTCTTTGGATGTCTTTGGAGATATGGGTGGA
GTGCTAGAGTTTCAAGTGATTTACATTCATCAAGATTGTAATTTGGTTTTCATTTTTGAT
CAGTTGAACTATGAGCTGGTAGCATACGACATGGACCGTAAGGAAGCGAGTGTTATTGCC
ACTTTGGAAGATGACAAAACCCAATCTGATTTTGCTCGTTACATTCCCTATTTCTCAGAA
TCACCAGCTCTCACAAATAAGTACTGA

Peptide Sequence

PEP ID

OQU81647
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:46196936:46200229:-1 gene:SORBI_3006G091850 transcript:OQU81647 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEGCSKTTAGAGVAGLPDDPVLEILSRVPAKSVCRFKCVSKAWRDLIADPNNRKRLRHAM
QGLFVQTYADELDDEELGKDDLGRIRFRFINLTAVRSVPLDIDPCFSFLTEMTGIKAFLL
DSCNGLILFGQSQDPSLLLLLDGYIVCNPTTRQWSAVPACGSREAISHTYLAFDPVVSSH
FHLVQLQIPDVQENVVSLHVYSSETGTWSHNQIDKQKEQGQLEGWHHQFTLDPLQHQCAF
VNGFLHLIVWGSNVHHILAVDVQGKARRMITVPGLADGRHEHNFVCYFGQSQGHLHCMIL
ESADKKNVELSTWVLQDYDTQEWVLKNTVNSLDVFGDMGGVLEFQVIYIHQDCNLVFIFD
QLNYELVAYDMDRKEASVIATLEDDKTQSDFARYIPYFSESPALTNKY

Transcript Sequence

Transcript ID

OQU81647
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:46196936:46200229:-1 gene:SORBI_3006G091850 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTTTGAAGGTTTACCTTTCACCTTGCATTGCTGTACACGTTCTACAGCCAGCCCGTTGTT
TGTGGAAAAAAAACAAAAAAAAAAGACAATGAACAGAGGCAGGCTCAAACTTTGCGGCCC
ATTTGCTGAGGCGCTAGGCCCAGACCAAAAACTAAATTTACGTGAAGCCCAAACTCTTCT
AGTAACGGAACAACTGTCCGCACTCCGCATTTGTTCGCTCCGTCGGTTCTGGTTCTAGGT
TTAGAAATCCCCAAATCCCATTTTTTTCCAATCGAATTCGATCTTCAATCGTCGGCACAG
CCCTGCGCCGGCGCCGTCGACCACGGCGATCTCCGGTGTCTGGTAAGTTCAGTTCCCTTT
GTCTCCCCGTTGCTGCATTTGCCCCCTCGCATCCCCTCACACCTCCGTCTCGCTCGGACG
CTCGGCGGCCGCTTTCCACAGATTGCTTTCGGAGGGAGGCATGGAGGGCTGCTCCAAGAC
GACCGCCGGCGCGGGGGTGGCCGGCCTCCCTGACGACCCCGTGCTGGAGATCCTGTCCCG
CGTCCCTGCCAAGTCCGTCTGCCGGTTCAAGTGCGTGTCCAAGGCCTGGCGCGACCTCAT
CGCCGACCCTAACAACCGTAAGAGGCTCCGCCACGCCATGCAGGGATTGTTTGTCCAGAC
GTACGCGGATGAATTGGATGACGAGGAATTGGGCAAGGATGACTTGGGCCGTATCAGGTT
CCGTTTCATCAACCTGACAGCAGTGAGATCCGTGCCTCTGGACATCGACCCTTGCTTCTC
CTTCCTGACGGAAATGACTGGGATCAAGGCCTTCTTGTTGGATTCCTGCAATGGGCTTAT
CCTTTTCGGGCAGAGTCAGGATCCGTCTCTCCTATTGCTATTGGATGGCTATATCGTGTG
CAACCCAACCACAAGGCAATGGTCTGCTGTGCCTGCTTGCGGCTCTAGGGAAGCGATAAG
CCACACCTATTTGGCTTTCGATCCGGTTGTATCCTCTCACTTTCACTTGGTCCAGCTCCA
GATTCCTGATGTGCAAGAGAATGTAGTGTCGTTGCATGTTTACTCGTCTGAAACTGGGAC
TTGGAGTCACAACCAAATTGACAAACAAAAAGAGCAAGGACAATTGGAAGGGTGGCATCA
TCAGTTTACACTAGACCCTCTTCAGCATCAGTGTGCCTTTGTTAATGGCTTCCTACATCT
GATAGTTTGGGGCTCAAATGTACATCACATACTTGCTGTAGATGTACAAGGGAAGGCAAG
AAGGATGATCACTGTGCCAGGTCTGGCTGATGGGAGACACGAGCACAACTTTGTTTGTTA
TTTCGGTCAATCCCAAGGGCACCTACATTGCATGATTCTAGAGTCTGCTGATAAAAAGAA
TGTGGAACTATCCACCTGGGTTCTTCAGGATTATGATACACAAGAATGGGTGTTGAAAAA
CACTGTGAACTCTTTGGATGTCTTTGGAGATATGGGTGGAGTGCTAGAGTTTCAAGTGAT
TTACATTCATCAAGATTGTAATTTGGTTTTCATTTTTGATCAGTTGAACTATGAGCTGGT
AGCATACGACATGGACCGTAAGGAAGCGAGTGTTATTGCCACTTTGGAAGATGACAAAAC
CCAATCTGATTTTGCTCGTTACATTCCCTATTTCTCAGAATCACCAGCTCTCACAAATAA
GTACTGAGTGTGTGCTCTAAGTATGAGCTAGCGGCTTGGTTAAATAACAGTAGACTCATG
TGAAATGTTCTGCTTGTGCTTGGATGTATGCCTTCTTAATTAGTACTGCAAGCCTGTTGA
GACATTGGATGTATGCCTTTCATGCTTTTGATCTAATTAGTACTGCAAGCTTGTTGAAAC
ATTTATATAGTGTACCTTTAGGGATGCTAATTATATTAATGAATATTGTTGCACAAGTTG
AACAATTTCGACTTTTGGTGATAAGTTTTATGATTAGCATGTCTTTTTTGGCTGTATTAA
TGATCAATTATTTATTGTGAATTTAGTCTGTTTGGTTGTGTGTTTATTTATGTCAATCAA
TCAAATCAAAATTATCTTCCATATTCAGCTAATGTTGCATGTATGGAATGGTTTCAAATT
GAAGGCTTGCGGTTACATCAAAAGTTTAGAACCAAAAAGTCCTTTTTATGCTACAGTAAA
AACAGATGTGCTGTAGAGGTAATCTCATTGGAGGAAACTTATACTGTTTCAAATGTAGTA
TGTGCAATTAACTGTCATGTGGACATGCCACATCTTATCTTCCTAATAGAACATCAGTTG
TAGTGTTCCTAGAGGCATTCGCAAGGAACTTTGATCCAATCGGATCTGCCTGGAAGAAAG
TTTAGTTCTCTCCAAGAGAAGTACAATTTTGGACCTACCTGATGCTGAGAGACAGTTATT
TGCCTATTTCTACATGTCATGAAACCCTGAGAAAAACTGTATTATCAGTTAGCTGTAGTG
TTTTCTTTGCATCAGTCAATAGTTGAGCTTGTTCTTTCATGACAACTTATGGCATGTTCT
TTCTACTAGTGAGATTCGGGTTTAAATCTGTATTGAAGCAATCTTTAAAATATCCAGTGT
TGGGAGCTGTCAGCTCCTCACTGAAGCCTTTAAATTGACACTAATTGGTTGCTTGTTCTT
CCTTGGAAAATAATTGATTATATTCGTTGAGTTCAGCAAGGTCATTGTGGGAACTTGCTG
GAGCATGTCAAGAGCTTTTTACTCTGAAACCTTTGAAATTGTCTCCAATTCAGATTAAAA
ATAACCAAGAAAGTATTGTGTAACAGTAATGATAACAGAGGAATCGAGGACCTAGATGAT
GCTGTAGATTGGTTCCCTGATCATAGTTTGAAAATGTATACCATTACTTCTTCTCGTGCT
GCTGAAATGTAAGTAACGTTGCCTGTGAATTTTCACGAATGGAAAAATGTCACTGTGATT
GCCTTCCATTCCTCTTGGGATAAAGCCCTCAACACTTGTTCAAATGTAATTATTTGCATT
TCTTTTTGTGACAGTTGGGAAGCAAAATAGAATTTAACATAGAAATTGGGAGGATAGTAG
ATGCCATCATATCTTTCCTGTCTTTCAAGGATGATCCACGGGAATTAGACGGTCGATGGT
GCCATGAAAAACGGCTGTTAAATGTTTGGATTGCAGGAAGATTAATATTAGGTTGGCACA
TATATTACATAAGGAGGATTACATGTGGTTTGCAATGTTTATAGGTTCTGGCATATAGTA
GCAATAAACTATACAGATTGTAGAAGGTACTAAATTTCAGGTGGCCTTCATAGT