Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU81618
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:45585485:45590576:-1 gene:SORBI_3006G086500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCCGCGTGGTGGCCCCGCAGCAAGCTGAGGTCGAGGTCGAAGGCCAAGCCGGGGGCC
GCCGGGTCCGTCTCCGCAGCGTCGTCCCCGCGCAAGTCCGTGGACCTCGAGTCGCCCTCC
CCGTCCCCGTCGCCGACGCAGCGGGACAGGAAGGCGCACAGCCTCGACTTCCCCGGCGCG
GGCGCGGGCGCGGCGGGCCCCGCGCGCGGCCGGTGCGCCGCGGCGGGGCATCATGGGTCG
GTAGGGTACAAGCTCCCGATGCCCGTGGAGGCGACGGAGCCTGTCGGGACTCTGTACGAG
GAGGTGCTGGCGGCGGCGGCGGCGGCCGGTGACGGCTGCTCGTCCGCGGAGGAGTCCAGC
GTGTGCTCGGCCGGGTCGTTGGACGAGCCGCACTACCAGCATGGGTTTAGGCCCATGGAT
CCAGTTGCTTTTGCGAGGGAAAGAAATATGCCTTCTGATTCGGATAGGACCGTAAATGAA
GACAAGCGTTTCATGTCTTGTAGTATGCCACGGGAGCATCAGAAGTTCTTTGAGGTTCCT
GTGTCTAGTGTTAGAGAACTTCATTTGCAAAGTGATGAACCTTCAACTAGTGAAGCCAAT
CATTCACGTGGAAGAATGACATCTGATGATCTCTTTGCTCCAAGAACAAGGAGTCTCTCT
CCTGTCCCAAAAGGCCATGTCTTCGCTGTGAGCAATGGAAATTCTAGAGAATTTGGTTTT
AGCCCGAGGTCACCAGTAAGAAAGATGGATGGGTTGAGGAGCCCACCACATCCCTTACCT
CTTCCTCCAGCTTCTGCTACTTGCTCTCCTCTTCTTCCAGCTTCTGCTGCTTGCTCACCT
CTTCACCCAGCTTCTGGTGCATGCTCACCTCTCCATCCAGCTTCTGGTGCTTGCTCACCT
CTTCCTCCAATCCACAGTCCATGCTCGCCTCTTCCTTCATCTCCCAGTTCCTGCCCACCT
CTTCCTGCATCTCCTACTACCTCCTCACAGTCCCAGTCGCAATGGAAGAAAGGAAAATTG
CTAGGGAGTGGTACATTTGGCCAGGTTTACCTTGGATTTAACAGTGAAAATGGACAGTTT
TGTGCAATTAAGGAGGTTGAAGTTATTATGGACGATCCACATTCAAAGGAACGACTCAAA
CAATTAAATCAGGAAATAGATATGCTTAGACAACTCTCCCACCCGAACATAGTGCAGTAT
CATGGAAGTGAGCTGAGTGATGAAGCACTTTCCATTTATCTTGAGTATGTTTCAGGGGGT
TCAATCCACAAGTTACTAAGAGAATATGGCCCTTTTAAGGAACCTGTGATTCGTAATTAC
ACTGGGCAAATTCTTGCAGGTCTTGCCTACTTGCATGGGCGAAACACTGTCCACAGAGAT
ATCAAAGGAGCAAACATACTTGTGGGTCCTAATGGTGAAGTCAAGCTTGCTGACTTTGGC
ATGGCTAAGCATATATCATCTTTTGCTGAAATACGCTCTTTCAAAGGAAGTCCTTACTGG
ATGGCTCCTGAGGTTATAATGAACAGTAAAGGCTACAGTTTATCAGTGGACATTTGGAGT
CTGGGCTGTACCATTATTGAAATGGCAACGGCAAGACCTCCTTGGCACCAATATGAGGGG
GTAGCAGCAATATTTAAGATTGCAAACAGTAAAGATATACCTGAAATCCCAGACAGTTTC
TCAGAGGAAGGGAAAAGTTTCTTGCAGCTTTGCTTGAAACGCAACCCTGCATCTCGTCCC
TCTGCAGCCCAGCTGATGGATCATCCTTTTGTTCAGGATCATCCTGCAGTGAGAGCTGCA
AAATCCAGTGTATTGAGAAACGCAATGTCTTCTCCAGCAGATGGCAGACACACAATGTCC
AACAGGGAGTTGCCATCTCGGAAGATTATTACTCCTCTGAAAGATATTGCACTGAGCATG
CGAGATTTTACTGGATTTTCTACTGCTGTTACTTCTCCACACAGCAGCCCTATTCCTGGA
AGAGCAAACATGTCTACGCCAGTTTCACCATGCTCAAGCCCGCTGCGGCAGTTTAAGCAA
ACCAACGCGAGGTGCATGCGTTCTCCACCTCATCCAATGCTCTCCCCTGGTCTTGGCAAC
ACATTAAGTTACACGCAAAATCAGACAAGACGCATTCCAGCTCCTGCCATTTCAGATCCT
TGGCTGGATGTTGGCCAGATGAAACTCCAAACCCCCAATATTTCCCCCAAAAGGTTCTGA

Peptide Sequence

PEP ID

OQU81618
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:45585485:45590576:-1 gene:SORBI_3006G086500 transcript:OQU81618 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPAWWPRSKLRSRSKAKPGAAGSVSAASSPRKSVDLESPSPSPSPTQRDRKAHSLDFPGA
GAGAAGPARGRCAAAGHHGSVGYKLPMPVEATEPVGTLYEEVLAAAAAAGDGCSSAEESS
VCSAGSLDEPHYQHGFRPMDPVAFARERNMPSDSDRTVNEDKRFMSCSMPREHQKFFEVP
VSSVRELHLQSDEPSTSEANHSRGRMTSDDLFAPRTRSLSPVPKGHVFAVSNGNSREFGF
SPRSPVRKMDGLRSPPHPLPLPPASATCSPLLPASAACSPLHPASGACSPLHPASGACSP
LPPIHSPCSPLPSSPSSCPPLPASPTTSSQSQSQWKKGKLLGSGTFGQVYLGFNSENGQF
CAIKEVEVIMDDPHSKERLKQLNQEIDMLRQLSHPNIVQYHGSELSDEALSIYLEYVSGG
SIHKLLREYGPFKEPVIRNYTGQILAGLAYLHGRNTVHRDIKGANILVGPNGEVKLADFG
MAKHISSFAEIRSFKGSPYWMAPEVIMNSKGYSLSVDIWSLGCTIIEMATARPPWHQYEG
VAAIFKIANSKDIPEIPDSFSEEGKSFLQLCLKRNPASRPSAAQLMDHPFVQDHPAVRAA
KSSVLRNAMSSPADGRHTMSNRELPSRKIITPLKDIALSMRDFTGFSTAVTSPHSSPIPG
RANMSTPVSPCSSPLRQFKQTNARCMRSPPHPMLSPGLGNTLSYTQNQTRRIPAPAISDP
WLDVGQMKLQTPNISPKRF

Transcript Sequence

Transcript ID

OQU81618
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:45585485:45590576:-1 gene:SORBI_3006G086500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCCGCGTGGTGGCCCCGCAGCAAGCTGAGGTCGAGGTCGAAGGCCAAGCCGGGGGCC
GCCGGGTCCGTCTCCGCAGCGTCGTCCCCGCGCAAGTCCGTGGACCTCGAGTCGCCCTCC
CCGTCCCCGTCGCCGACGCAGCGGGACAGGAAGGCGCACAGCCTCGACTTCCCCGGCGCG
GGCGCGGGCGCGGCGGGCCCCGCGCGCGGCCGGTGCGCCGCGGCGGGGCATCATGGGTCG
GTAGGGTACAAGCTCCCGATGCCCGTGGAGGCGACGGAGCCTGTCGGGACTCTGTACGAG
GAGGTGCTGGCGGCGGCGGCGGCGGCCGGTGACGGCTGCTCGTCCGCGGAGGAGTCCAGC
GTGTGCTCGGCCGGGTCGTTGGACGAGCCGCACTACCAGCATGGGTTTAGGCCCATGGAT
CCAGTTGCTTTTGCGAGGGAAAGAAATATGCCTTCTGATTCGGATAGGACCGTAAATGAA
GACAAGCGTTTCATGTCTTGTAGTATGCCACGGGAGCATCAGAAGTTCTTTGAGGTTCCT
GTGTCTAGTGTTAGAGAACTTCATTTGCAAAGTGATGAACCTTCAACTAGTGAAGCCAAT
CATTCACGTGGAAGAATGACATCTGATGATCTCTTTGCTCCAAGAACAAGGAGTCTCTCT
CCTGTCCCAAAAGGCCATGTCTTCGCTGTGAGCAATGGAAATTCTAGAGAATTTGGTTTT
AGCCCGAGGTCACCAGTAAGAAAGATGGATGGGTTGAGGAGCCCACCACATCCCTTACCT
CTTCCTCCAGCTTCTGCTACTTGCTCTCCTCTTCTTCCAGCTTCTGCTGCTTGCTCACCT
CTTCACCCAGCTTCTGGTGCATGCTCACCTCTCCATCCAGCTTCTGGTGCTTGCTCACCT
CTTCCTCCAATCCACAGTCCATGCTCGCCTCTTCCTTCATCTCCCAGTTCCTGCCCACCT
CTTCCTGCATCTCCTACTACCTCCTCACAGTCCCAGTCGCAATGGAAGAAAGGAAAATTG
CTAGGGAGTGGTACATTTGGCCAGGTTTACCTTGGATTTAACAGTGAAAATGGACAGTTT
TGTGCAATTAAGGAGGTTGAAGTTATTATGGACGATCCACATTCAAAGGAACGACTCAAA
CAATTAAATCAGGAAATAGATATGCTTAGACAACTCTCCCACCCGAACATAGTGCAGTAT
CATGGAAGTGAGCTGAGTGATGAAGCACTTTCCATTTATCTTGAGTATGTTTCAGGGGGT
TCAATCCACAAGTTACTAAGAGAATATGGCCCTTTTAAGGAACCTGTGATTCGTAATTAC
ACTGGGCAAATTCTTGCAGGTCTTGCCTACTTGCATGGGCGAAACACTGTCCACAGAGAT
ATCAAAGGAGCAAACATACTTGTGGGTCCTAATGGTGAAGTCAAGCTTGCTGACTTTGGC
ATGGCTAAGCATATATCATCTTTTGCTGAAATACGCTCTTTCAAAGGAAGTCCTTACTGG
ATGGCTCCTGAGGTTATAATGAACAGTAAAGGCTACAGTTTATCAGTGGACATTTGGAGT
CTGGGCTGTACCATTATTGAAATGGCAACGGCAAGACCTCCTTGGCACCAATATGAGGGG
GTAGCAGCAATATTTAAGATTGCAAACAGTAAAGATATACCTGAAATCCCAGACAGTTTC
TCAGAGGAAGGGAAAAGTTTCTTGCAGCTTTGCTTGAAACGCAACCCTGCATCTCGTCCC
TCTGCAGCCCAGCTGATGGATCATCCTTTTGTTCAGGATCATCCTGCAGTGAGAGCTGCA
AAATCCAGTGTATTGAGAAACGCAATGTCTTCTCCAGCAGATGGCAGACACACAATGTCC
AACAGGGAGTTGCCATCTCGGAAGATTATTACTCCTCTGAAAGATATTGCACTGAGCATG
CGAGATTTTACTGGATTTTCTACTGCTGTTACTTCTCCACACAGCAGCCCTATTCCTGGA
AGAGCAAACATGTCTACGCCAGTTTCACCATGCTCAAGCCCGCTGCGGCAGTTTAAGCAA
ACCAACGCGAGGTGCATGCGTTCTCCACCTCATCCAATGCTCTCCCCTGGTCTTGGCAAC
ACATTAAGTTACACGCAAAATCAGACAAGACGCATTCCAGCTCCTGCCATTTCAGATCCT
TGGCTGGATGTTGGCCAGATGAAACTCCAAACCCCCAATATTTCCCCCAAAAGGTTCTGA