Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU81613
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:45522269:45525665:-1 gene:SORBI_3006G085900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCCGCGTCCGCGTCCGCCGTCGCCTCAACGGTGTCCGCGATCTCCCACCACGTT
GCCGCCGGGCACCTCTTCGCCGCCATCGACGCCCTCCCCCCGTGCTCTGCCTCCTCCCTG
CTCCCGCCCTCTCTTTACGCCTCGCTCCTCCGCTTGGCAACCTCCCGCCGCTCCCTCGCC
GCCGCCCGCCGCGTCGCCTCCCACCTCGCCTCCTCTTCGTCTTCTTCCCCTTCCACCTCG
ACCTCGTTCGCTCCAACATTCCTCTTCAACCGCGCTATCGAGTCGCTCGCTGCCTGCGGC
AGTCTCGCCGACGCGCGGGAGATGTTCGACGCAATGCCACGCCGGGATGGCGGATCCTGG
AACGCCATCATCTCCGCCTCGTCCCGCGCTGGGCACCCTGCAGAGGCGTTCTCCCTCTTC
GCTGGCATGAACTCTCTTGGCATTCGCCCCAAGGACGTCACACTGGCATCAGTGCTTGCC
TGCTGTGCTGAGTGCCTTGACCTGCGTGGTGCACAACAGCTCCATGGTCACATCGCAAAG
AGAGACTTTCAGTCCAATGTGATTCTAGGCACGGCACTGGTTGACGTGTATGGGAAGTGC
CTCTTGCTTACAGATGCAAGGCGGGCATTTGATGACATCCTGCAACCCAATGACATTTCG
TGGAATGTAATCATCCGGAGATATCTTCTCGCTGGTATGGGCGACATGGCAGTTCATATG
TTCTTCAGGATGGTATGGGCTGGCATTAGGCCACTGGTATATACTGTCACACACGCAATG
CTTGCTTGCCGGGATAACGGTGCACTTAAAGAAGGAAGGTGCATACATACTTTTGTGCTC
CGACATGGGTATGAACACCATGTACACGTGCGGAGCTCAGTTGTAGATATGTATGCAAAG
TGTGGTGACATTGATGCAGCGCTAAGGCTCTTCAACTTGGCACCAAAGAAGGACGTGGTG
ACATCCACTTCAGTTGTGTCAGGATTGGCTGCTTGTGGCAGGATTGCTGATGCAAAAAGG
GTGTTTGATGGCATGGAACAGCACAATTTGGTATCCTGGAACGCTATGTTGACCGGTTGT
GTCAAGTCCATGGATCTGACTGGTGCTTTAGATTTGTTCCAGCAGATGAGGCACGAGACA
AAGGAGCTTGATGTCGTTACACTTGGTTCTGTGCTCAATGCCTGTACAGGGCTGCTTGAC
CTTGGGAAAGGTGAGGAGCTCCATGCACTTGCTCTCAAGTGTGGTTTGTTCAGTTACCCC
TTTTTGATGAATGCACTTGTGAGGTTATATTCCAAATGTGGATGCCTGAGGAACGCGGAA
CGGCTTCTTCTATTTGAGATGGGATCAGAGAGAGAGAGATTCTCCTGGAACTCACTCATC
TCAGGTTACGAACGCCACTCCATGAGTGAAGCAGCTCTGCATGCTCTACGTGAGATGCAA
TCTGAGGCAAAACCTAGCCAGTCCACATTCAGCTCTGCCCTTGCAGCCTGTGCAAATATA
TTTCTGCTGAATCATGGCAAGCAGATTCATGCATACATGATCAGAAACGGGTATGATATT
GATGACATACTGCGAAGTGCACTGGTTGATATGTATTCCAAGTGTAGTCTGTTTGATTAT
TCCTCCAGGATCTTTGAGTTGGGATTATCTAATGATGTCATCCTGTGGAATTCTATGATC
TTTGCATGTGCTTACAATAGCAAAGGTGACTATGGGCTTGAATTGTTTGATGAAATGCGG
AAGCAGGGGATTAGGCCAGACTCTGTCACTTTCCTTGGTGCTCTGGTTTCATGTATCTGT
GAAGGGCATGTTGGGTTGGGGAGGAGTTATTTCACTCTGATGACTGATGAGTATAGCATC
ATCCCACGCATCGAACACTATGAATGCATGATCGAGCTGTTGGGCAAGCATGGATACATG
GTTGAGCTAGAGGATTTCGTGGACCACATGCCCTTTGAGCCAACAACCGCGATGTGGCTT
AGGATCTTTGACTGCTGCAGGGAATATGGGAACAGAAAATTAGGGGAGAGGGCTGCGCAG
CGTATCAATGACAGAAAACCCCTTACTCCAGTTATATTTTTCGAGTCCACTCCTGACTAC
AAATGCAGTGGCAGTGATGATGAAGAGCCCATGTCATTCTGCTGA

Peptide Sequence

PEP ID

OQU81613
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:45522269:45525665:-1 gene:SORBI_3006G085900 transcript:OQU81613 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAASASAVASTVSAISHHVAAGHLFAAIDALPPCSASSLLPPSLYASLLRLATSRRSLA
AARRVASHLASSSSSSPSTSTSFAPTFLFNRAIESLAACGSLADAREMFDAMPRRDGGSW
NAIISASSRAGHPAEAFSLFAGMNSLGIRPKDVTLASVLACCAECLDLRGAQQLHGHIAK
RDFQSNVILGTALVDVYGKCLLLTDARRAFDDILQPNDISWNVIIRRYLLAGMGDMAVHM
FFRMVWAGIRPLVYTVTHAMLACRDNGALKEGRCIHTFVLRHGYEHHVHVRSSVVDMYAK
CGDIDAALRLFNLAPKKDVVTSTSVVSGLAACGRIADAKRVFDGMEQHNLVSWNAMLTGC
VKSMDLTGALDLFQQMRHETKELDVVTLGSVLNACTGLLDLGKGEELHALALKCGLFSYP
FLMNALVRLYSKCGCLRNAERLLLFEMGSERERFSWNSLISGYERHSMSEAALHALREMQ
SEAKPSQSTFSSALAACANIFLLNHGKQIHAYMIRNGYDIDDILRSALVDMYSKCSLFDY
SSRIFELGLSNDVILWNSMIFACAYNSKGDYGLELFDEMRKQGIRPDSVTFLGALVSCIC
EGHVGLGRSYFTLMTDEYSIIPRIEHYECMIELLGKHGYMVELEDFVDHMPFEPTTAMWL
RIFDCCREYGNRKLGERAAQRINDRKPLTPVIFFESTPDYKCSGSDDEEPMSFC

Transcript Sequence

Transcript ID

OQU81613
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:45522269:45525665:-1 gene:SORBI_3006G085900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCCGCGTCCGCGTCCGCCGTCGCCTCAACGGTGTCCGCGATCTCCCACCACGTT
GCCGCCGGGCACCTCTTCGCCGCCATCGACGCCCTCCCCCCGTGCTCTGCCTCCTCCCTG
CTCCCGCCCTCTCTTTACGCCTCGCTCCTCCGCTTGGCAACCTCCCGCCGCTCCCTCGCC
GCCGCCCGCCGCGTCGCCTCCCACCTCGCCTCCTCTTCGTCTTCTTCCCCTTCCACCTCG
ACCTCGTTCGCTCCAACATTCCTCTTCAACCGCGCTATCGAGTCGCTCGCTGCCTGCGGC
AGTCTCGCCGACGCGCGGGAGATGTTCGACGCAATGCCACGCCGGGATGGCGGATCCTGG
AACGCCATCATCTCCGCCTCGTCCCGCGCTGGGCACCCTGCAGAGGCGTTCTCCCTCTTC
GCTGGCATGAACTCTCTTGGCATTCGCCCCAAGGACGTCACACTGGCATCAGTGCTTGCC
TGCTGTGCTGAGTGCCTTGACCTGCGTGGTGCACAACAGCTCCATGGTCACATCGCAAAG
AGAGACTTTCAGTCCAATGTGATTCTAGGCACGGCACTGGTTGACGTGTATGGGAAGTGC
CTCTTGCTTACAGATGCAAGGCGGGCATTTGATGACATCCTGCAACCCAATGACATTTCG
TGGAATGTAATCATCCGGAGATATCTTCTCGCTGGTATGGGCGACATGGCAGTTCATATG
TTCTTCAGGATGGTATGGGCTGGCATTAGGCCACTGGTATATACTGTCACACACGCAATG
CTTGCTTGCCGGGATAACGGTGCACTTAAAGAAGGAAGGTGCATACATACTTTTGTGCTC
CGACATGGGTATGAACACCATGTACACGTGCGGAGCTCAGTTGTAGATATGTATGCAAAG
TGTGGTGACATTGATGCAGCGCTAAGGCTCTTCAACTTGGCACCAAAGAAGGACGTGGTG
ACATCCACTTCAGTTGTGTCAGGATTGGCTGCTTGTGGCAGGATTGCTGATGCAAAAAGG
GTGTTTGATGGCATGGAACAGCACAATTTGGTATCCTGGAACGCTATGTTGACCGGTTGT
GTCAAGTCCATGGATCTGACTGGTGCTTTAGATTTGTTCCAGCAGATGAGGCACGAGACA
AAGGAGCTTGATGTCGTTACACTTGGTTCTGTGCTCAATGCCTGTACAGGGCTGCTTGAC
CTTGGGAAAGGTGAGGAGCTCCATGCACTTGCTCTCAAGTGTGGTTTGTTCAGTTACCCC
TTTTTGATGAATGCACTTGTGAGGTTATATTCCAAATGTGGATGCCTGAGGAACGCGGAA
CGGCTTCTTCTATTTGAGATGGGATCAGAGAGAGAGAGATTCTCCTGGAACTCACTCATC
TCAGGTTACGAACGCCACTCCATGAGTGAAGCAGCTCTGCATGCTCTACGTGAGATGCAA
TCTGAGGCAAAACCTAGCCAGTCCACATTCAGCTCTGCCCTTGCAGCCTGTGCAAATATA
TTTCTGCTGAATCATGGCAAGCAGATTCATGCATACATGATCAGAAACGGGTATGATATT
GATGACATACTGCGAAGTGCACTGGTTGATATGTATTCCAAGTGTAGTCTGTTTGATTAT
TCCTCCAGGATCTTTGAGTTGGGATTATCTAATGATGTCATCCTGTGGAATTCTATGATC
TTTGCATGTGCTTACAATAGCAAAGGTGACTATGGGCTTGAATTGTTTGATGAAATGCGG
AAGCAGGGGATTAGGCCAGACTCTGTCACTTTCCTTGGTGCTCTGGTTTCATGTATCTGT
GAAGGGCATGTTGGGTTGGGGAGGAGTTATTTCACTCTGATGACTGATGAGTATAGCATC
ATCCCACGCATCGAACACTATGAATGCATGATCGAGCTGTTGGGCAAGCATGGATACATG
GTTGAGCTAGAGGATTTCGTGGACCACATGCCCTTTGAGCCAACAACCGCGATGTGGCTT
AGGATCTTTGACTGCTGCAGGGAATATGGGAACAGAAAATTAGGGGAGAGGGCTGCGCAG
CGTATCAATGACAGAAAACCCCTTACTCCAGTTATATTTTTCGAGTCCACTCCTGACTAC
AAATGCAGTGGCAGTGATGATGAAGAGCCCATGTCATTCTGCTGAGGTGGACAAAACTGG
TGATGATTGAGATTCTTGTTGAGGAGTGGTCTTTTTGGTGGCTGAGAAGCTGAATGGGCA
GTCTGAGATGCTACAAACTTGAACTTGACCTTTTAGCTGCCTATAAGCTGGTAGGATCAG
CATTCAGCAGCACTTATGATACCCTGCTAAAACGAGAATTCAGGCTGGACCCTGAGCTCA
TGTGCTGATTGACCTGATAATTGATGTCTATCAAGGGCTTAACCTCCTCTCCTGCCTTGG
GGGTTTGCATTGGGTCAGAATGTAGTTAAGAAGTATATGATCATATAGTGCTGGATTTCC
CAATTGCAGACTTCACTTTCAGCAGTTCATCTGTCTGTCGAGTAAAGTACGACTATCACC
ATCAATCGAGTAAAGTATGTGCATCTACAGTGCAAGATTCCATCATCTGGAGATGGACTT
CTGATGGCCAGTATTCCACGTCAGCGCACAAGGCACAATTCAAGGGCTCCTACACTAGGC
CCAAACCAAAGTTAATTTGAAGCACATATGGAAAACAAATGCAAGCCTTCACTTGGATTT
TGGTGCAAGATAAAACTCTAACCACAGACAATTTGGTGCTATGGGGTTGGCCTCACCATG
ATGCATGTGTGCTGTGTAATGGCCCCCTGAGACTGGAAGACACCTTTGCTTGCAGTGCCC
CTTTGCCTAGGCGATCGGGAACCAGGTTCTGACCTGGGACCATTTTAGCATGAGGCTGCC
TGCGCTTTCAGATGTGAGCACAGCGATTAGCACCTGGTGGAAGGAAACAGCCCGCAAGAT
CCCAAAGGACAAGAGGCGCAGTTTCAAAGGTATGGCCGTCTATATCATGTGGAACATCTG
GAAACATCATAACCAGCTCATCTTTGACAGCATGTCCCAAACGGTGCAACAGGTTGCTCT
AAAAGTGAAGGAAGACATTTCTCAGCATAAAAGAGCTTTTAACAATCTGCCATAGTGTTT
GTTTCCTTGGCTCAGTGTCTCCTTGTGTTCAGGGGAGGTTTCTCAGCCTTTGGGGCTTTT
CCTGTTTTATTAGTGATGTGGTGTAGCAGCTAGCAACTGCCTCTCCCTTAGTTTTGGATT
GTTTGTTCTCTTTTTCGTACCTTAATTGAAGGGCAGAGCTGCTGCAATTTGTGTTAAAAA
AAAATCGAGCTGAAGCTTGATCTACAATGAGAACTCTCGGAGAGCAAATGGCATGCCTCG
AGTTAAGATAAGAAGATGCTGATGCATTTTTAGTTGC