Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU81526
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:43367081:43375291:-1 gene:SORBI_3006G071628 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGTGCGCGCGAGCCTCGCCTGCTTCCCCTCCGACCCCGCGCTCCACGAGGCCTGC
GGCATCCCGTGGGGCGTCGCCGTCACTCCGTTCTCTGCCACAGATGAGCGCGGCTCCACG
CCGGCCACCGGCGCCGAGGGCCACCTCCTCCCCCGCTGCCAGTCCTGCTTCGCCTACTTC
AGCTTGCTCTGCCCGCTCGACCGCTGGTCCTGGAACTGCGCCGTCTGCGGCGCCGAGAAT
GACCTCCCCGCCGACGCCGCCGCGCGCTACGCCCGCGACGGTGGCCACGACCCGCCCGAG
ATGCGCTCCGCGTTCGTCGACCTCCTCCTCCCCCCCAGGGAGGAGGGCGAGGCGGCAGCG
GCAGCGGCTCCGACGCCCGTGTACGTCGCAGCGATCGACTTGTCCTCTTCAGAGGAGTTC
TTGGAGCTAGTCAAAAGTGCTCTTCAAGCAGCTCTTGAAGCTCTTTCTCCAGGATCACTA
TTTGGGCTTTTGACATTTAGCAGCAAAATAGGATTATATGATGTCCAAGGCCCAATACCT
ATTGTGAAGAATGTGTTTATCCCTCCGGATTCTGATGGTGCCTTACAAGTTGACCTTGAA
GATATCATGCCCCTTTGCTCATTTTTGGCACCTATTGATAGTTGCAAAGATCGCATTACT
GAAGCACTTGAAACAATTAAACCGATGTCTTCCTGGGAAGTAGCTGCAAATGCGCACGAA
GGACAGGATCATGTATTGCATCATGTACGTGGTTTTGGTGTAGCGTTGGATGTTCTTATC
AACTATCTAAGTTCGGAATATGGAAATGCGTTCGAGCTTGCTAGGATATTTGCATTTTTA
TCTGGTCCACCCAATTATGGGGCTGGGCAGCTGGATATAAGTGAGGACCAAAATGCTGGT
AAAGCAAGGGGTGCTGATCATATATTGCTGCAGGAGCAGACAAGGTTCTACAAAAATCTG
GCTACTAGTGCTGTTCAAGCAGGTGTGTGCGTGGACCTTTTTGCAATTACAAATGAATAC
ACTGATCTTACTTCCCTGAAAGTTCTGAGTGTTGAGAGCGGTGGATCACTGTTTCTGTAT
TCAAGTACAGATGAATCAACACTTCCACAAGATATATACAAGATGTTGAGTCGTCCCTAT
GCTTTTGGATGCGTAATGCGATTGAGAACATCGTCACAGTTCAAGATTGCTGATTCTTAT
GGCCATTTCTTTCCAGATCCTCAGTACATGCATGTTCAACACATAAATTGTTGTGACTCT
TTTACTACATACAGTTACGACTTTGAGTTTGAAAAGGATTCACAATTTTCTAGGAAGTCA
AGCCCTCCTATTATTCAAATTGCATTTAAGTACACAGTTCTTGTGCACAATGGTGATACA
TCAGATTTTCCAAATTCTGGGAGCAGATCTAAATACTTGTTGGAAAGGAGGCTAAGAGTG
CGGACTATACAGTACAACACAACTGCTAATATCTGGGACCTTTACGATTTTGTTGATCCA
GATGTTGTTTTGACAATACTAGTACACCAGGTTATTTTGGCTTCGTTAAGTGATGAGCTG
GAAACAAGGCTGTGGCTCCAAGATTGGTTGGCAGTTGTCATTGCTCAGTACAACAAAGCA
TACAAGAACGTCACATCTGGAGGTGGTACTGAGATGTATAATATTGATGTTAATTTCTCG
CACTGCTCACAACTGCAGCCTCTGTCACGGTTTGTGTTTGCTATTCTATTAAGCCCCCTG
CTTCAAGTCAGCAGTGAAGGCATTCATCCAGATTATGTGACATATTTGCAATGCCTCTTG
AGTGCACTGGAGCCAGCTTCGCTTCGGCAGGCTATTTGGCCTACATTGATTTCATACTCC
TCCCCCGATGTAGAAGCAGAAGTACATCAATCACTAAGCCGGACTGTGTTCACCAGTGAG
AGGCCGATATTTCTTCTTGATGCATACAAAGACCTTCTGGTGTATTACTCACCTACAGCT
AGTAGCGAAATCCCTTTTCCTCCTCCACGTGACTGTCTACTGAGATCAACAGTCGATAGA
CTAAAACAAGAAAGGAATATAACACCCAAACTGGTTTTCATTCAAGGAGCACATGATGAC
ACTACAGAATTCGAGAAATACCTTGTTGAGGATCAGACCTTGGATGGCTCCCTGTTACCT
AGCTCCACAGGTTTCAGCTCATTCCTTGATGAGGTTAGAAGTAAAGTGGCTGAGCATAGC
ATTTGA

Peptide Sequence

PEP ID

OQU81526
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:43367081:43375291:-1 gene:SORBI_3006G071628 transcript:OQU81526 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAVRASLACFPSDPALHEACGIPWGVAVTPFSATDERGSTPATGAEGHLLPRCQSCFAYF
SLLCPLDRWSWNCAVCGAENDLPADAAARYARDGGHDPPEMRSAFVDLLLPPREEGEAAA
AAAPTPVYVAAIDLSSSEEFLELVKSALQAALEALSPGSLFGLLTFSSKIGLYDVQGPIP
IVKNVFIPPDSDGALQVDLEDIMPLCSFLAPIDSCKDRITEALETIKPMSSWEVAANAHE
GQDHVLHHVRGFGVALDVLINYLSSEYGNAFELARIFAFLSGPPNYGAGQLDISEDQNAG
KARGADHILLQEQTRFYKNLATSAVQAGVCVDLFAITNEYTDLTSLKVLSVESGGSLFLY
SSTDESTLPQDIYKMLSRPYAFGCVMRLRTSSQFKIADSYGHFFPDPQYMHVQHINCCDS
FTTYSYDFEFEKDSQFSRKSSPPIIQIAFKYTVLVHNGDTSDFPNSGSRSKYLLERRLRV
RTIQYNTTANIWDLYDFVDPDVVLTILVHQVILASLSDELETRLWLQDWLAVVIAQYNKA
YKNVTSGGGTEMYNIDVNFSHCSQLQPLSRFVFAILLSPLLQVSSEGIHPDYVTYLQCLL
SALEPASLRQAIWPTLISYSSPDVEAEVHQSLSRTVFTSERPIFLLDAYKDLLVYYSPTA
SSEIPFPPPRDCLLRSTVDRLKQERNITPKLVFIQGAHDDTTEFEKYLVEDQTLDGSLLP
SSTGFSSFLDEVRSKVAEHSI

Transcript Sequence

Transcript ID

OQU81526
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:43367081:43375291:-1 gene:SORBI_3006G071628 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGGTTTCGAGGCAAAATTTCATTGTTGGCACAGCGTCCATGTGATTAGAGATTCCTCAAT
CCCTATCACATCGCTTGGTTCATTCCAGCCATCAAGATCACAAATCGAAATAGACGCTCC
TGATCAGCTTTCCGTGGTGTGTTTCACCATTTCCAGTCCAGCACACAAGGCCCCTCCTTG
CCGGCTGCCCACTGGTTAAACCGCACCAAAACACTCGAGGCGCACAAGGCACAGAGCTTC
CCTGAGATCTCTCGTCACGTCGCCAGATCCGAAGCCCCAAATCCGCGCGGCGGCAATGGC
GGTGCGCGCGAGCCTCGCCTGCTTCCCCTCCGACCCCGCGCTCCACGAGGCCTGCGGCAT
CCCGTGGGGCGTCGCCGTCACTCCGTTCTCTGCCACAGATGAGCGCGGCTCCACGCCGGC
CACCGGCGCCGAGGGCCACCTCCTCCCCCGCTGCCAGTCCTGCTTCGCCTACTTCAGCTT
GCTCTGCCCGCTCGACCGCTGGTCCTGGAACTGCGCCGTCTGCGGCGCCGAGAATGACCT
CCCCGCCGACGCCGCCGCGCGCTACGCCCGCGACGGTGGCCACGACCCGCCCGAGATGCG
CTCCGCGTTCGTCGACCTCCTCCTCCCCCCCAGGGAGGAGGGCGAGGCGGCAGCGGCAGC
GGCTCCGACGCCCGTGTACGTCGCAGCGATCGACTTGTCCTCTTCAGAGGAGTTCTTGGA
GCTAGTCAAAAGTGCTCTTCAAGCAGCTCTTGAAGCTCTTTCTCCAGGATCACTATTTGG
GCTTTTGACATTTAGCAGCAAAATAGGATTATATGATGTCCAAGGCCCAATACCTATTGT
GAAGAATGTGTTTATCCCTCCGGATTCTGATGGTGCCTTACAAGTTGACCTTGAAGATAT
CATGCCCCTTTGCTCATTTTTGGCACCTATTGATAGTTGCAAAGATCGCATTACTGAAGC
ACTTGAAACAATTAAACCGATGTCTTCCTGGGAAGTAGCTGCAAATGCGCACGAAGGACA
GGATCATGTATTGCATCATGTACGTGGTTTTGGTGTAGCGTTGGATGTTCTTATCAACTA
TCTAAGTTCGGAATATGGAAATGCGTTCGAGCTTGCTAGGATATTTGCATTTTTATCTGG
TCCACCCAATTATGGGGCTGGGCAGCTGGATATAAGTGAGGACCAAAATGCTGGTAAAGC
AAGGGGTGCTGATCATATATTGCTGCAGGAGCAGACAAGGTTCTACAAAAATCTGGCTAC
TAGTGCTGTTCAAGCAGGTGTGTGCGTGGACCTTTTTGCAATTACAAATGAATACACTGA
TCTTACTTCCCTGAAAGTTCTGAGTGTTGAGAGCGGTGGATCACTGTTTCTGTATTCAAG
TACAGATGAATCAACACTTCCACAAGATATATACAAGATGTTGAGTCGTCCCTATGCTTT
TGGATGCGTAATGCGATTGAGAACATCGTCACAGTTCAAGATTGCTGATTCTTATGGCCA
TTTCTTTCCAGATCCTCAGTACATGCATGTTCAACACATAAATTGTTGTGACTCTTTTAC
TACATACAGTTACGACTTTGAGTTTGAAAAGGATTCACAATTTTCTAGGAAGTCAAGCCC
TCCTATTATTCAAATTGCATTTAAGTACACAGTTCTTGTGCACAATGGTGATACATCAGA
TTTTCCAAATTCTGGGAGCAGATCTAAATACTTGTTGGAAAGGAGGCTAAGAGTGCGGAC
TATACAGTACAACACAACTGCTAATATCTGGGACCTTTACGATTTTGTTGATCCAGATGT
TGTTTTGACAATACTAGTACACCAGGTTATTTTGGCTTCGTTAAGTGATGAGCTGGAAAC
AAGGCTGTGGCTCCAAGATTGGTTGGCAGTTGTCATTGCTCAGTACAACAAAGCATACAA
GAACGTCACATCTGGAGGTGGTACTGAGATGTATAATATTGATGTTAATTTCTCGCACTG
CTCACAACTGCAGCCTCTGTCACGGTTTGTGTTTGCTATTCTATTAAGCCCCCTGCTTCA
AGTCAGCAGTGAAGGCATTCATCCAGATTATGTGACATATTTGCAATGCCTCTTGAGTGC
ACTGGAGCCAGCTTCGCTTCGGCAGGCTATTTGGCCTACATTGATTTCATACTCCTCCCC
CGATGTAGAAGCAGAAGTACATCAATCACTAAGCCGGACTGTGTTCACCAGTGAGAGGCC
GATATTTCTTCTTGATGCATACAAAGACCTTCTGGTGTATTACTCACCTACAGCTAGTAG
CGAAATCCCTTTTCCTCCTCCACGTGACTGTCTACTGAGATCAACAGTCGATAGACTAAA
ACAAGAAAGGAATATAACACCCAAACTGGTTTTCATTCAAGGAGCACATGATGACACTAC
AGAATTCGAGAAATACCTTGTTGAGGATCAGACCTTGGATGGCTCCCTGTTACCTAGCTC
CACAGGTTTCAGCTCATTCCTTGATGAGGTTAGAAGTAAAGTGGCTGAGCATAGCATTTG
AGTACCAATGTCACCTCTCTCGATTGTTGAACTGTGATGTTTTACGGGTGATGACCACCC
ATGCAACCCAGAAGTACTGTCATGAGTCAAAGAGTGATGTTATAGTGCTTTGCTTGTTAC
CGGCGGCCTATGCTGTGTGTTTGATGGATGCTGCTCGCCATTTTTTTACCGAACAGCTAT
ATGGGTTTTAAAGCCTGCCTTAACGAGACAGCTGTACAATGCCATATGAGCTGGCAGCAC
TATTCTCGAGTGATGTTTCAAATACTCATGCGCTATAGTTTTGTAGATTTGTACTTCGAA
CGCATTTGATATCGTTTTCAGCGATTGGTGT