Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU81356
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:32287957:32292983:-1 gene:SORBI_3006G046600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCGAGGTGGGATTCGGAGGACGGAGGTGCTGCTGACGAGGCTGCCGCGGCGGTGGCA
GTGAGGCTGGCCAACAAGATCCGGAAGCGCCGCGCGGTGTCGTCGTCGGGGGGCTCGGAC
CCGGCGGCGGGGAGGAGGCTGCGGTCCAGGCGGCCCGCGGTGCTGCTGCCGCGGCGCCGG
ACCAGCGCGGGCGGGGACATGTCGGAGTCGTCCCGGAGCCGCCATTGCCGTGGCGGCGGC
GGCAACCGCCTCGCCGATGGGGCGCGGCCGTCCGCGTCCGCGAGGAGGCTTGTCGACGCG
TTCTGGCAGGACATGGACAGCGGTCTGCTTCAAGGGGACGCGGCGGCGCGCCGGAGCTTG
GTTCTGTGGAGCGGCGCCTCCACGGAGGTGTCCAAGAGGTCAAGAAGTAAGAGCAAGATC
TTGGAGGCGGATGGTAAGGGAAGTCGGCGCAATGGCCATGCTCGATGGCTTTCAGCAGAT
ATGATGAGCACCGGCAGCGCAATGGAGATTGGTACATTCTCTCAAGACGATGTTTCAAGA
TGTCCTGACAAAACAGTGAACCTACAGGATCTGCAGAACAGCTTGATTGCATCTAAGGAG
CTGGTAAAAGTACTCGCCCACATATGGGGCCCTGGAGAACTGAATCCGTCAAGTGTGTCA
CTCATTTCTGCTCTACGTTCAGAGCTTGATGTTGCTCGTTCTCATGTTAGAAAGCTAATC
AAAGAACAGAAATCTGATTCCTATGAAATTGAGGGCTTAAAGAAGCAGCTTACAGAAGAA
ATGGAATCTTGGAAGGTCAAACAAAAGGAGAAGGTTGCAAATGCTCTCCAATTTATAGTT
TCAGAGCTAGACACTGAGAAGAAGTCAAGGAAAAGAGCAGAGAAGACAAACAAGAAGTTG
AGCATTGCCTTAGCCAACACTGAAGCCTCACTGCAGGCAGTGACGAAAGAACTTGATAGG
GAAAGGAAATCTAAAGGAAGAGTTGAAAAGATCTGCAACGAGCTCATCAGAGGCATTGAT
GAGGACAAAGCTGAGGTGCAGGCACTGAAGAGAGAAACCGAGAAGGCACAAGAAGAGCTC
CAGAAAGAGCGTGAGATGCTTCAACTTGCAGATGAGTGGCGTGAACAAAGGGTTCAGATG
AAGCTGTTAGAAGCACGGCTTCAATTTGAGGAGAAAAATGCGGCTGTTAATCAGCTGCGC
GATGAACTCCAAGCTTATCTGGATACTAGGAAAGAGCAGGAACCATTGAATGATCCAATG
CAACTGTCCCATGCATCTGAAAATGGCGCTCCTCCAGCTGATGTAGTTCCTGACAGAAAT
GGTGGAAACTGCAGCGAAGATGGTGCATCAGAAGGCAGTGATATACACTCCATTGAGCTG
AACGTCGATGGCATCAACAGGACATACACCTGGAGCTACACTCCTTCGTCAAAGGGCAGG
CAGAGGAGCGCATCAAGGCATGAATCAATTTCCGATAGAGGGATGGATGGCGTGAACTCG
TGGCGATTAGAGCAAAGCTTTTGGGACATGGATGAAGAACTGGAGGGAGACTGGGCAGAA
GGGTGTAGCAACGGAATGCTGAACTTGGATCATGACGAGGAGAGGTATCTGGCAATCAAG
AATCTCAGAGAGCAGATGTTGGCCGGGTCGGGGTTCATCATGTCACAAGGTAGAGAAGAT
GCTGAAAGAGAGTATTGTGGCTTGTAA

Peptide Sequence

PEP ID

OQU81356
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:32287957:32292983:-1 gene:SORBI_3006G046600 transcript:OQU81356 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPRWDSEDGGAADEAAAAVAVRLANKIRKRRAVSSSGGSDPAAGRRLRSRRPAVLLPRRR
TSAGGDMSESSRSRHCRGGGGNRLADGARPSASARRLVDAFWQDMDSGLLQGDAAARRSL
VLWSGASTEVSKRSRSKSKILEADGKGSRRNGHARWLSADMMSTGSAMEIGTFSQDDVSR
CPDKTVNLQDLQNSLIASKELVKVLAHIWGPGELNPSSVSLISALRSELDVARSHVRKLI
KEQKSDSYEIEGLKKQLTEEMESWKVKQKEKVANALQFIVSELDTEKKSRKRAEKTNKKL
SIALANTEASLQAVTKELDRERKSKGRVEKICNELIRGIDEDKAEVQALKRETEKAQEEL
QKEREMLQLADEWREQRVQMKLLEARLQFEEKNAAVNQLRDELQAYLDTRKEQEPLNDPM
QLSHASENGAPPADVVPDRNGGNCSEDGASEGSDIHSIELNVDGINRTYTWSYTPSSKGR
QRSASRHESISDRGMDGVNSWRLEQSFWDMDEELEGDWAEGCSNGMLNLDHDEERYLAIK
NLREQMLAGSGFIMSQGREDAEREYCGL

Transcript Sequence

Transcript ID

OQU81356
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:32287957:32292983:-1 gene:SORBI_3006G046600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTGTCATCATAGGCATCACCCCTTCTTCTTGACCGCATCAGTCGACCGGTGACACTGAGC
ACAACTGACTGCACTCGCATTGCTCTCCGCTTCTTCCTGGTTGGTGTTGCGTTGGTGAGC
AGGACGAGGAGGAGGAGGTGGCAGCAAGAAGAATCTTGGTAGCTTGCAATGCCGAGGTGG
GATTCGGAGGACGGAGGTGCTGCTGACGAGGCTGCCGCGGCGGTGGCAGTGAGGCTGGCC
AACAAGATCCGGAAGCGCCGCGCGGTGTCGTCGTCGGGGGGCTCGGACCCGGCGGCGGGG
AGGAGGCTGCGGTCCAGGCGGCCCGCGGTGCTGCTGCCGCGGCGCCGGACCAGCGCGGGC
GGGGACATGTCGGAGTCGTCCCGGAGCCGCCATTGCCGTGGCGGCGGCGGCAACCGCCTC
GCCGATGGGGCGCGGCCGTCCGCGTCCGCGAGGAGGCTTGTCGACGCGTTCTGGCAGGAC
ATGGACAGCGGTCTGCTTCAAGGGGACGCGGCGGCGCGCCGGAGCTTGGTTCTGTGGAGC
GGCGCCTCCACGGAGGTGTCCAAGAGGTCAAGAAGTAAGAGCAAGATCTTGGAGGCGGAT
GGTAAGGGAAGTCGGCGCAATGGCCATGCTCGATGGCTTTCAGCAGATATGATGAGCACC
GGCAGCGCAATGGAGATTGGTACATTCTCTCAAGACGATGTTTCAAGATGTCCTGACAAA
ACAGTGAACCTACAGGATCTGCAGAACAGCTTGATTGCATCTAAGGAGCTGGTAAAAGTA
CTCGCCCACATATGGGGCCCTGGAGAACTGAATCCGTCAAGTGTGTCACTCATTTCTGCT
CTACGTTCAGAGCTTGATGTTGCTCGTTCTCATGTTAGAAAGCTAATCAAAGAACAGAAA
TCTGATTCCTATGAAATTGAGGGCTTAAAGAAGCAGCTTACAGAAGAAATGGAATCTTGG
AAGGTCAAACAAAAGGAGAAGGTTGCAAATGCTCTCCAATTTATAGTTTCAGAGCTAGAC
ACTGAGAAGAAGTCAAGGAAAAGAGCAGAGAAGACAAACAAGAAGTTGAGCATTGCCTTA
GCCAACACTGAAGCCTCACTGCAGGCAGTGACGAAAGAACTTGATAGGGAAAGGAAATCT
AAAGGAAGAGTTGAAAAGATCTGCAACGAGCTCATCAGAGGCATTGATGAGGACAAAGCT
GAGGTGCAGGCACTGAAGAGAGAAACCGAGAAGGCACAAGAAGAGCTCCAGAAAGAGCGT
GAGATGCTTCAACTTGCAGATGAGTGGCGTGAACAAAGGGTTCAGATGAAGCTGTTAGAA
GCACGGCTTCAATTTGAGGAGAAAAATGCGGCTGTTAATCAGCTGCGCGATGAACTCCAA
GCTTATCTGGATACTAGGAAAGAGCAGGAACCATTGAATGATCCAATGCAACTGTCCCAT
GCATCTGAAAATGGCGCTCCTCCAGCTGATGTAGTTCCTGACAGAAATGGTGGAAACTGC
AGCGAAGATGGTGCATCAGAAGGCAGTGATATACACTCCATTGAGCTGAACGTCGATGGC
ATCAACAGGACATACACCTGGAGCTACACTCCTTCGTCAAAGGGCAGGCAGAGGAGCGCA
TCAAGGCATGAATCAATTTCCGATAGAGGGATGGATGGCGTGAACTCGTGGCGATTAGAG
CAAAGCTTTTGGGACATGGATGAAGAACTGGAGGGAGACTGGGCAGAAGGGTGTAGCAAC
GGAATGCTGAACTTGGATCATGACGAGGAGAGGTATCTGGCAATCAAGAATCTCAGAGAG
CAGATGTTGGCCGGGTCGGGGTTCATCATGTCACAAGGTAGAGAAGATGCTGAAAGAGAG
TATTGTGGCTTGTAAGGTAAACGGGACATGAAGAAAATTAAAAAGTAATGTGTCATATGG
ATCGCTGTTTGATGCTAAGACCCAACTGTTCAAGAATATATATAGTGATGGTTTTGTGTG
GATGACTCTGCCCCTGGTAAATGTCTTGAGCTCTTGAAAGGTTGGGCTACAGGGCAGGTG
TGTTCATGTTAAGTTCCATGACAGGGATGTCTTGTATGTGTTTTAATGTCCATTTACGTG
GCCGGAAATGTAAAAGCAAAATATTGGAACTTGTGGAGTGCAGAGTTTCTAAATCACAAA
AGAATAGGTTTTTCTAACCCAGACATTCAGATTCAGGACTACAACAGGGGGTTGGGCCAC
AACCCGGTAGCGGCCGACGAGAGTCTGGCCCGTTGAATATAGGATCGAGTAAAGGTGTTG
C