Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU81300
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:15323240:15325856:-1 gene:SORBI_3006G038100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTGAGGACAAGCGCCTCGTCGCCGCGGCGCCGTACCTACCGGCGGAGCTCATACCG
GACATCGCGCGGCACTTGACGACGCTCCAGGACTTCTTCGCCCTCCGCGCCGCCTGCCGC
TCCTACCGCGCCGCGCTGCCACCCTCCCGCGCCGTCCTCGCGTCCCAGCCGCCGCATCTA
CTCGTGCCCCACCACGCCTCCTCCCCGTGCTCGCTGGCCCTCATCCACCTCCCGCGCCGC
CGCCTCCTCCGCTTCCGTGCGCCCTCCCCTTTCCCCAGCGCCGTCGTTGCATCCGACGGC
GCGCGCGTCGTCACCTTTGACCACTTTGCCCGCGAGCTCTCCGTCATCCACCTTCTTTCC
GGCGACCGGGTTCGCGTCCCCGATGCTCCTTTCCTGTTCTCCCGCGCAGTCCTCGCCGGC
GACCTCGTCCTCCTCATCACACCTGGGTGGGTTCAGTACTGCCGCCTGGGGGACGGCCGA
TGGCGGGAGGCGTATTGCCGGCTCGGGGGCTGCGGTGGCAGCCTCTTCGGTGGCCTGTAT
ATGATGGTCGGCATGCTCGCTGTCAATGGCGTCCTATATGCGCTCCTCAACACGTGCCAG
CTCGCAGTCGCAGAGCTGATGGACAATAAGGTTGAATTAAAGCTGCTTGGAGGGGAAGTG
GATGACCATGTCAGAGATGCTTGGATGGAAAGCAAGGATTTCATGCTTGGGGCGTGTGCT
GGTGAACCCTTACTCATCTTCAAGGTATCAGTCAAGCCTGAGTACAAGGTTTTCCGGTGG
GAACCTGCAGAGCAAAGGTGGTTGAGGGCTATGACCCTGGGAAGGCGGACTCTTTTCATG
TCTGGCAATGGCTTTGATGCTTGGGTTGGTCCAGATTCACCTGGAATTCGAGGGGATTGC
ATATATGAGGCTCTGCCACGGGCAGCAGGTTGGAGTGAGTACTCTTTAGTTGATGACACT
TATGAACTCGTCACTATTGACTACCAAGGTGCACCAGATCTAGATGCCTTAAGAAAGCAG
GTTTGGGTGCTTCCAAGCTTGTACTGA

Peptide Sequence

PEP ID

OQU81300
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:15323240:15325856:-1 gene:SORBI_3006G038100 transcript:OQU81300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAEDKRLVAAAPYLPAELIPDIARHLTTLQDFFALRAACRSYRAALPPSRAVLASQPPHL
LVPHHASSPCSLALIHLPRRRLLRFRAPSPFPSAVVASDGARVVTFDHFARELSVIHLLS
GDRVRVPDAPFLFSRAVLAGDLVLLITPGWVQYCRLGDGRWREAYCRLGGCGGSLFGGLY
MMVGMLAVNGVLYALLNTCQLAVAELMDNKVELKLLGGEVDDHVRDAWMESKDFMLGACA
GEPLLIFKVSVKPEYKVFRWEPAEQRWLRAMTLGRRTLFMSGNGFDAWVGPDSPGIRGDC
IYEALPRAAGWSEYSLVDDTYELVTIDYQGAPDLDALRKQVWVLPSLY

Transcript Sequence

Transcript ID

OQU81300
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:15323240:15325856:-1 gene:SORBI_3006G038100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTGAGGACAAGCGCCTCGTCGCCGCGGCGCCGTACCTACCGGCGGAGCTCATACCG
GACATCGCGCGGCACTTGACGACGCTCCAGGACTTCTTCGCCCTCCGCGCCGCCTGCCGC
TCCTACCGCGCCGCGCTGCCACCCTCCCGCGCCGTCCTCGCGTCCCAGCCGCCGCATCTA
CTCGTGCCCCACCACGCCTCCTCCCCGTGCTCGCTGGCCCTCATCCACCTCCCGCGCCGC
CGCCTCCTCCGCTTCCGTGCGCCCTCCCCTTTCCCCAGCGCCGTCGTTGCATCCGACGGC
GCGCGCGTCGTCACCTTTGACCACTTTGCCCGCGAGCTCTCCGTCATCCACCTTCTTTCC
GGCGACCGGGTTCGCGTCCCCGATGCTCCTTTCCTGTTCTCCCGCGCAGTCCTCGCCGGC
GACCTCGTCCTCCTCATCACACCTGGGTGGGTTCAGTACTGCCGCCTGGGGGACGGCCGA
TGGCGGGAGGCGTATTGCCGGCTCGGGGGCTGCGGTGGCAGCCTCTTCGGTGGCCTGTAT
ATGATGGTCGGCATGCTCGCTGTCAATGGCGTCCTATATGCGCTCCTCAACACGTGCCAG
CTCGCAGTCGCAGAGCTGATGGACAATAAGGTTGAATTAAAGCTGCTTGGAGGGGAAGTG
GATGACCATGTCAGAGATGCTTGGATGGAAAGCAAGGATTTCATGCTTGGGGCGTGTGCT
GGTGAACCCTTACTCATCTTCAAGGTATCAGTCAAGCCTGAGTACAAGGTTTTCCGGTGG
GAACCTGCAGAGCAAAGGTGGTTGAGGGCTATGACCCTGGGAAGGCGGACTCTTTTCATG
TCTGGCAATGGCTTTGATGCTTGGGTTGGTCCAGATTCACCTGGAATTCGAGGGGATTGC
ATATATGAGGCTCTGCCACGGGCAGCAGGTTGGAGTGAGTACTCTTTAGTTGATGACACT
TATGAACTCGTCACTATTGACTACCAAGGTGCACCAGATCTAGATGCCTTAAGAAAGCAG
GTTTGGGTGCTTCCAAGCTTGTACTGATATTGGCCTATGAAGATCTAATTCTGAGGTTGA
ATCCATCGACATCACCGAAAGGTCATTTTGCTCATCTACTCTATTATGCTATAAATTGCT
TAGGTCTTGTTTAGTTCCCAAAAACTACCCAAAAATTTTTAAAATTTCCCGTCATATCGA
ATCTTGTGGCATATGCATGGAACATTAAATGTAGATGAAAACAAAAACTAATTGCATAGT
TTAACTGTAAATCGCGAGATGAATCTTTTGAGTTTAGTTACTCCATGACTGGACAATGTT
TGCCAAATAAAAATGAAAGTGCTACAGGACCCAGAAACAAAAAAATTTGGAAACTGAACA
AGGCCTTAATTGTAGTACATGAATTTGTTATTATTACTTATCATCAGTTTACTGATCTAA
TTTGAGTGCAAATTGTGTTCCAATACATAATTACATACAGAGGCCTCTGGGTCTCCTAAA
TTTGATAGTTCAAAATATGACCCTTCTATTAATTGGCACTATCTTTGTTGGGTTAGCCTT
ACTAAGACAGCTCTGTACTTGAACACTTGAATTTCAGATAATGACATATGAGTGTGCACC
ATTTAGTGGTGTGGGATCTTCTGTTTATTCTTGATAATTTCAGGATGCTTGCTACTTGCC
AATTCAGGGATGGAGCTACTGCAAGATTCTAGCTTGATTATGGATTTTGTTCTTTTGAAA
TGGTCTTTTCCCCAGCTCTTTCCTTTTGGAAAAAAATATAAAAGCTTTTGGCACACCAGT
TTCTGTTGCAAACCAAATGATTCATTGACAATGCCATGGAAGCTTTGGCTCAGCTTACAA
ATCTGAGTATGCTCGAGGCCTTCACTTTGTCAAGATGACAAGGAAAGTTGGGTCCTATCT
GTGAAATAAAATTTTCTCCGCTAAACAATCCTACAAAATGTTCTTGGGATCTTTGCATGG
CTGATCCAGACTTTGCTTGGTTATTTAATCCTGTTGCCATGGCAAGGCCAAGTTCTTGTT
CTGACATCTTTTGAAAGATAGATTGAACATGCTCAACTTGCTTCTCTGGAAAAACATCTA
CCCGGACAACTTTTTGACCCCTGCACTATATCTCAAGAAGGGTCCCAAGTTCTTCATCTC
TTCTTCCCATGCTCAGCAGGAAATGTTGTTGCTTCGGGATCTGTGACCTATTTATACTCT
CTTTTTTTGACATATTGGCTAAGGGTCTCCAGGGCCTTGGATAGTTGGTTTGCACATCAT
CAGGGAGGTTTTGATCACATATTGGTCAGTCTGTTCAAAGCATGATATCATTTCCACCAA
TGCATCCTGGCTTCCAACATTGGAAAAAGGGTTTGAAGGAAAACTTCAATATTTTAGATT
GGTCAATCTGTTCAAAGCATGATATCATTTCTATACGATGCATCCTGGCCTTCCAACATT
GGAAGAAGGGTTTGAAGGAGAACTTCAATATTATAGTCAAACTTCAATATTGGCTAGAGT
CATGCTCACTGTAAACAGTTTAAGATCTCTCTTTGGACCTGAGGTCCACCCATGTACATG
TACATTTTTTCCTTATTAACAGAAAAGCACAATATGT