Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU81275
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:10583463:10608467:-1 gene:SORBI_3006G035300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCGATGCGCTCCCCCTCCGGCGGCGGCAGCGTGGTGGCCCGCGCACGTTCGTGACGGG
CCTTCCGCCACGCGCCCCGGTTCCTGTGGCTCCGAGTCCGAGCTTGCTCCCCGCGCCCGC
GCCGTCGCTGCGTGGCGGAGCGGATTCACCAACATGTGGCTTTTCTGGCGCACTAGGAAC
CGCTTCTCCCTTGAGGAGCTCCGGTATTTAACAGACCAGCTACAAAAGGTTCATGTTGTC
AATGAAGCTAACAAGGATTTCGTGATTGAAGCATTGAGATCAATTGCAGAACTTATGATA
TATGGTGACCAGCATGATCCTTCGTTTTTTGAATATTTTATGGAGAAACAGATCATGGGT
GAATTCGCTCGTGTCCTAAGGATCTCTAAGCTGTCAAGAGTGTCACTCCAACTGCTACAG
ACAATGGGTATCATGATCCAAAATCTGAGAAATGAACACTCAATTTATTACATTTTTAGC
AATGAGCACATCAACTTCTTGATTACATTCCCATTTGACTTTCGAATTGATGAGATGTTA
TCGTACTACATATCTTTTCTGCGGGCGATAAGTGGGAAGTTGAACAAGAATACAATTTCT
TTGCTCGTGAAGACGAAAAATGATGAGGTCACTTCCTTTCCTCTTTATGTTGAGGCCTTA
AAGTTTGCTTTCCATGAGGATAGCATGATTCGAGTTGCTATACGTACCTTGACACTCAAT
GTCTATCATGTTGGAGATGAATCTGTTAACAGATTCGTTTCCCGTGTGCCTCTATCAGAT
TATTTTTCAGACATAGTTCAGCATTTTCAGAAGCAGTGCATTGACTTGGATAAGTTGGTT
GCACACTCTTCACGAAATGCGAATTCTTCTTTGCCAATGCCTTCTGTTGAAGATGCAATT
GTGCAAATTGAAGACACACTGTATTATTTCAGTGATGTTATGTCTTCTGGTATTCCTGAT
CTTGAAAGGTTCATCACTGAAAATATCTTGCAAGTTCTGGTATTTCGGTTCTTATTCCCA
TCATTGCAGAGGCAGAGCACAGATTTGGACTTAAGTGTCACTACATCAATGTATCTACTT
TGTTGTATACTACACATTTTTAAGAATAAGGATATGGCAAGTACTGTAGCTGCTGCCCTT
TTTCATCAACCTGATGGCCTTTATGATAAGGAACAAGGGACACCTAATGGGTTTACATCT
GAGCATGATAATTGCAAATTTGAGAATTATTGCACTACTTCCTCTGCTGTCGAGCAATCA
AATGAGGATGAGCCAAATTCTTTGTCTTCTGTTAGTTGGAAACGCTTGCCCAACAATTCA
CCGCCAAGTGATTGCTGCCAAGGCAACACACCAAGGGAACACTTGCTGTCCTATATCACA
GAAGGAGATGATTCACAAGCTTTGGGTTCATTGTGCTTATTCGCTACATTATTGCAGACG
AAAGAACTTGATGAATCAATGCTGGATGCACTTGGAATCCTCCCTCAGAGAAAGCAGCAT
AAGAAACTTCTATTACAAGCTTTAGTAGGTGAAGACCATGCTGAAAGGCAATTATTTTCA
TCAAGCAGCAGTCTAACTGATGACAGCATCTGTAGTGATTTTGATATTTATGTAAGGAAG
CTTCAGGATAAATATGGGCTACAGTGTCACCATCCACGGCAAATGACTTCCAAAGCTCAC
AGATATCAGGTGCTCGATGCTATAGTCAACCTTTTCTGCAGATCAAAGGTTTCTGCAGAT
GTTCGTTTGGTTGGTGGCTGGCTTTTCCGGCAACTGCTGCCCCATGGAGAGGAAGAATTC
ACTGCTTTTCATCTAAGGCGACTAAAGGATTCACACAAGGATTGTAGCTCAAAGCTTTCT
GAGGAATCTGGAGGATGCTGGTGTGACATGCTTCTTCCTATTGTTAAAGAAGCTTGGAGG
AACTGCAAGAAAGCAATTGAGGCATCTTCACCACCAAAAGGATCCAAATCTATTATTGTA
CCCATGGATTTGTGTTCATTTGGAGGTGATTCTTCTGTTGCCATCGCAGAGGGAATCTAT
GAGATGGTTAAGCATTGCATTCTTGCTAGTTGTAGAACTACGAAAGACGATGAAGACTGC
CAAGAGGAAAGCCCACCCAAATACTTAGGATACTGA

Peptide Sequence

PEP ID

OQU81275
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:10583463:10608467:-1 gene:SORBI_3006G035300 transcript:OQU81275 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MRCAPPPAAAAWWPAHVRDGPSATRPGSCGSESELAPRARAVAAWRSGFTNMWLFWRTRN
RFSLEELRYLTDQLQKVHVVNEANKDFVIEALRSIAELMIYGDQHDPSFFEYFMEKQIMG
EFARVLRISKLSRVSLQLLQTMGIMIQNLRNEHSIYYIFSNEHINFLITFPFDFRIDEML
SYYISFLRAISGKLNKNTISLLVKTKNDEVTSFPLYVEALKFAFHEDSMIRVAIRTLTLN
VYHVGDESVNRFVSRVPLSDYFSDIVQHFQKQCIDLDKLVAHSSRNANSSLPMPSVEDAI
VQIEDTLYYFSDVMSSGIPDLERFITENILQVLVFRFLFPSLQRQSTDLDLSVTTSMYLL
CCILHIFKNKDMASTVAAALFHQPDGLYDKEQGTPNGFTSEHDNCKFENYCTTSSAVEQS
NEDEPNSLSSVSWKRLPNNSPPSDCCQGNTPREHLLSYITEGDDSQALGSLCLFATLLQT
KELDESMLDALGILPQRKQHKKLLLQALVGEDHAERQLFSSSSSLTDDSICSDFDIYVRK
LQDKYGLQCHHPRQMTSKAHRYQVLDAIVNLFCRSKVSADVRLVGGWLFRQLLPHGEEEF
TAFHLRRLKDSHKDCSSKLSEESGGCWCDMLLPIVKEAWRNCKKAIEASSPPKGSKSIIV
PMDLCSFGGDSSVAIAEGIYEMVKHCILASCRTTKDDEDCQEESPPKYLGY

Transcript Sequence

Transcript ID

OQU81275
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:10583463:10608467:-1 gene:SORBI_3006G035300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGACGACCCAACGAAGCAACCGGGCGCCGAAAAGGATAGCGGAAGTGCGAAACCCAACAG
CAAGGAGAAGGCGAGGGAAAAACAAAGAAAAGAAAAAGAAAAGAAAAGGAGAATCGAAAA
GGCAAAAGGCGAGCCGCCTCGACCCGCGATCCCTGCGCACCGGCCGCCGGCGATCGCCGC
CGCCGCGGATGCGATGCGCTCCCCCTCCGGCGGCGGCAGCGTGGTGGCCCGCGCACGTTC
GTGACGGGCCTTCCGCCACGCGCCCCGGTTCCTGTGGCTCCGAGTCCGAGCTTGCTCCCC
GCGCCCGCGCCGTCGCTGCGTGGCGGAGCGGATTCACCAACATGTGGCTTTTCTGGCGCA
CTAGGAACCGCTTCTCCCTTGAGGAGCTCCGGTATTTAACAGACCAGCTACAAAAGGTTC
ATGTTGTCAATGAAGCTAACAAGGATTTCGTGATTGAAGCATTGAGATCAATTGCAGAAC
TTATGATATATGGTGACCAGCATGATCCTTCGTTTTTTGAATATTTTATGGAGAAACAGA
TCATGGGTGAATTCGCTCGTGTCCTAAGGATCTCTAAGCTGTCAAGAGTGTCACTCCAAC
TGCTACAGACAATGGGTATCATGATCCAAAATCTGAGAAATGAACACTCAATTTATTACA
TTTTTAGCAATGAGCACATCAACTTCTTGATTACATTCCCATTTGACTTTCGAATTGATG
AGATGTTATCGTACTACATATCTTTTCTGCGGGCGATAAGTGGGAAGTTGAACAAGAATA
CAATTTCTTTGCTCGTGAAGACGAAAAATGATGAGGTCACTTCCTTTCCTCTTTATGTTG
AGGCCTTAAAGTTTGCTTTCCATGAGGATAGCATGATTCGAGTTGCTATACGTACCTTGA
CACTCAATGTCTATCATGTTGGAGATGAATCTGTTAACAGATTCGTTTCCCGTGTGCCTC
TATCAGATTATTTTTCAGACATAGTTCAGCATTTTCAGAAGCAGTGCATTGACTTGGATA
AGTTGGTTGCACACTCTTCACGAAATGCGAATTCTTCTTTGCCAATGCCTTCTGTTGAAG
ATGCAATTGTGCAAATTGAAGACACACTGTATTATTTCAGTGATGTTATGTCTTCTGGTA
TTCCTGATCTTGAAAGGTTCATCACTGAAAATATCTTGCAAGTTCTGGTATTTCGGTTCT
TATTCCCATCATTGCAGAGGCAGAGCACAGATTTGGACTTAAGTGTCACTACATCAATGT
ATCTACTTTGTTGTATACTACACATTTTTAAGAATAAGGATATGGCAAGTACTGTAGCTG
CTGCCCTTTTTCATCAACCTGATGGCCTTTATGATAAGGAACAAGGGACACCTAATGGGT
TTACATCTGAGCATGATAATTGCAAATTTGAGAATTATTGCACTACTTCCTCTGCTGTCG
AGCAATCAAATGAGGATGAGCCAAATTCTTTGTCTTCTGTTAGTTGGAAACGCTTGCCCA
ACAATTCACCGCCAAGTGATTGCTGCCAAGGCAACACACCAAGGGAACACTTGCTGTCCT
ATATCACAGAAGGAGATGATTCACAAGCTTTGGGTTCATTGTGCTTATTCGCTACATTAT
TGCAGACGAAAGAACTTGATGAATCAATGCTGGATGCACTTGGAATCCTCCCTCAGAGAA
AGCAGCATAAGAAACTTCTATTACAAGCTTTAGTAGGTGAAGACCATGCTGAAAGGCAAT
TATTTTCATCAAGCAGCAGTCTAACTGATGACAGCATCTGTAGTGATTTTGATATTTATG
TAAGGAAGCTTCAGGATAAATATGGGCTACAGTGTCACCATCCACGGCAAATGACTTCCA
AAGCTCACAGATATCAGGTGCTCGATGCTATAGTCAACCTTTTCTGCAGATCAAAGGTTT
CTGCAGATGTTCGTTTGGTTGGTGGCTGGCTTTTCCGGCAACTGCTGCCCCATGGAGAGG
AAGAATTCACTGCTTTTCATCTAAGGCGACTAAAGGATTCACACAAGGATTGTAGCTCAA
AGCTTTCTGAGGAATCTGGAGGATGCTGGTGTGACATGCTTCTTCCTATTGTTAAAGAAG
CTTGGAGGAACTGCAAGAAAGCAATTGAGGCATCTTCACCACCAAAAGGATCCAAATCTA
TTATTGTACCCATGGATTTGTGTTCATTTGGAGGTGATTCTTCTGTTGCCATCGCAGAGG
GAATCTATGAGATGGTTAAGCATTGCATTCTTGCTAGTTGTAGAACTACGAAAGACGATG
AAGACTGCCAAGAGGAAAGCCCACCCAAATACTTAGGATACTGATAGGAACCCTAGTCCT
GCCTGACGTGGAGTGGAGGCTGTATGAGTGCGAGGAAGACGTCGTGGCCGCGCCGTGGCT
GCTGCGCGC