Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU81219
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:6117571:6132096:1 gene:SORBI_3006G029100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAGTTGCAGTTGAAGATGGGACGTGTTGATGGCTTTTCTTCGCAGCAAAACAGAGAT
GACCTTAAATTCACTTGGACAGATGTGACAGAGAGAATTACTAAGCCATCCACATCAATT
GATAGGTCAGTATACAAGGATGCTGAGGAAGATACTCCGCCAAGCACATCTGGTGATGAT
AATGGACATGAATTTAAAGAGAATAAGTATAAAGAAATGATATTTGGAGAAGATGCTCTG
AAAATTCCTCCTTCAGAGTCATACTGTCTGAGTCGTCCTATCAGGAGAGGCCATTTTAAT
GTGTCTAATAATTATTCACTGCATCAGGTTTTAGAAGATTTACGCACTATTTGGAACTGG
GTACTGACAGAAAAGTTGCATATCAACCCAAGAGATAGAGGTCTATATTCTGCAATTCTT
GTTCTTGGGGAGACATTTGACAACCGAGAAATAAAAGAGATGCTGTCTATCGTTCTCAAT
GATTTGGGGTTCAGCACAGCAGTTGTACATCAGGAAGCTCTAGCTGCAGCTTTTGGAAAT
GGTTTATCTACAGCTTGTGTTGTCAACATTGGTGCTCAAGTTACACAAGTAGTTTGTGTT
GAGGATGGAGTAGCTTTGCCACACACAGCTTTGGCGCTTCCATATGGTGGAGATGACATC
TCCAGATGCTTGCTTTGGGTTCAACGTCGCCATCGCACGTGGCCGAACTTCCAAACTGAT
CCAGTGAGCAAGCCTATAGATCTGCTAATGCTCAACAAAATAAAAGAGTCATATAGCCAA
ATAAAAACTGGGAGCATTGATGCAGTTGCGCTTGTTCATTCATATGATAATGAAAGATCT
GGTGGACATCAGAAGACAAAACTATCAGCTCTTAATGTTCCTCCTATGGGGCTTCTTTAC
CCAAGGGTTCTTGTTCCAGAAGAGTACCCTCCACCTCCTCGATCTTGGTTCCAAGACTAT
GATGACATGTTGGAGGATACCTGGCAAACAAGTGATGGTCTTTACCCTAGTGGGAATGGT
GGATTTGGCATGTGGGACAGTTATCCAGTGTTTTCCACTAGATTAAAGAAATTTGAGAAC
ATTGGCCTCGTAGAGGCCATCATTAGTAGCGTTCTTTCAACAGGACGTGTTGACCTTCAA
AGGAAGCTGTTCTGTAGCATTCAGCTGGTTGGTGGTGCAGCTTCTACAGCTGGCCTTGCA
CAAGTGCTGGAGCAAAGGGTTCGCACTAAAATTTCAGCAAACCAATCTATTGAGAAAGTT
GAGGTGTTGCAATCTAGGACTTATCCATTATTTGTTCCATGGAAAGGTGGAGTGATTTTG
GGTGTCCTTGATATTGGTAGGGATGCATGGATTCATAGAGAAGACTGGATTAAAAATGGT
GTCCACATCGGGAGTGGCAGAAAATATAAGGATTCCTATTTTCTTCAGGCGCAAGTAATG
TGCTACTACAATATATGA

Peptide Sequence

PEP ID

OQU81219
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:6117571:6132096:1 gene:SORBI_3006G029100 transcript:OQU81219 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MQLQLKMGRVDGFSSQQNRDDLKFTWTDVTERITKPSTSIDRSVYKDAEEDTPPSTSGDD
NGHEFKENKYKEMIFGEDALKIPPSESYCLSRPIRRGHFNVSNNYSLHQVLEDLRTIWNW
VLTEKLHINPRDRGLYSAILVLGETFDNREIKEMLSIVLNDLGFSTAVVHQEALAAAFGN
GLSTACVVNIGAQVTQVVCVEDGVALPHTALALPYGGDDISRCLLWVQRRHRTWPNFQTD
PVSKPIDLLMLNKIKESYSQIKTGSIDAVALVHSYDNERSGGHQKTKLSALNVPPMGLLY
PRVLVPEEYPPPPRSWFQDYDDMLEDTWQTSDGLYPSGNGGFGMWDSYPVFSTRLKKFEN
IGLVEAIISSVLSTGRVDLQRKLFCSIQLVGGAASTAGLAQVLEQRVRTKISANQSIEKV
EVLQSRTYPLFVPWKGGVILGVLDIGRDAWIHREDWIKNGVHIGSGRKYKDSYFLQAQVM
CYYNI

Transcript Sequence

Transcript ID

OQU81219
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:6117571:6132096:1 gene:SORBI_3006G029100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGGAGTGCCCAACTTCAGAAAACCAATGGCAATATAATTGTTTTATGGCAATTGTTCAAT
CAGGTGTTGTTCAGTGCTATAACAAATCTTCTCATTGATGAAATATAGTGTCTCCAAGCG
AGCACATAAATTATCTGAGCTTTTTCATGAATTTCCTTTGTAGCTATCAATCAAAGATAT
AAATGAGATTGTCAGATATGAAAAGATGTCAAGTGTTGAACAGAGAACTATAATGCAGTG
TATTAGCATCATAGCATGCAGTTGCAGTTGAAGATGGGACGTGTTGATGGCTTTTCTTCG
CAGCAAAACAGAGATGACCTTAAATTCACTTGGACAGATGTGACAGAGAGAATTACTAAG
CCATCCACATCAATTGATAGGTCAGTATACAAGGATGCTGAGGAAGATACTCCGCCAAGC
ACATCTGGTGATGATAATGGACATGAATTTAAAGAGAATAAGTATAAAGAAATGATATTT
GGAGAAGATGCTCTGAAAATTCCTCCTTCAGAGTCATACTGTCTGAGTCGTCCTATCAGG
AGAGGCCATTTTAATGTGTCTAATAATTATTCACTGCATCAGGTTTTAGAAGATTTACGC
ACTATTTGGAACTGGGTACTGACAGAAAAGTTGCATATCAACCCAAGAGATAGAGGTCTA
TATTCTGCAATTCTTGTTCTTGGGGAGACATTTGACAACCGAGAAATAAAAGAGATGCTG
TCTATCGTTCTCAATGATTTGGGGTTCAGCACAGCAGTTGTACATCAGGAAGCTCTAGCT
GCAGCTTTTGGAAATGGTTTATCTACAGCTTGTGTTGTCAACATTGGTGCTCAAGTTACA
CAAGTAGTTTGTGTTGAGGATGGAGTAGCTTTGCCACACACAGCTTTGGCGCTTCCATAT
GGTGGAGATGACATCTCCAGATGCTTGCTTTGGGTTCAACGTCGCCATCGCACGTGGCCG
AACTTCCAAACTGATCCAGTGAGCAAGCCTATAGATCTGCTAATGCTCAACAAAATAAAA
GAGTCATATAGCCAAATAAAAACTGGGAGCATTGATGCAGTTGCGCTTGTTCATTCATAT
GATAATGAAAGATCTGGTGGACATCAGAAGACAAAACTATCAGCTCTTAATGTTCCTCCT
ATGGGGCTTCTTTACCCAAGGGTTCTTGTTCCAGAAGAGTACCCTCCACCTCCTCGATCT
TGGTTCCAAGACTATGATGACATGTTGGAGGATACCTGGCAAACAAGTGATGGTCTTTAC
CCTAGTGGGAATGGTGGATTTGGCATGTGGGACAGTTATCCAGTGTTTTCCACTAGATTA
AAGAAATTTGAGAACATTGGCCTCGTAGAGGCCATCATTAGTAGCGTTCTTTCAACAGGA
CGTGTTGACCTTCAAAGGAAGCTGTTCTGTAGCATTCAGCTGGTTGGTGGTGCAGCTTCT
ACAGCTGGCCTTGCACAAGTGCTGGAGCAAAGGGTTCGCACTAAAATTTCAGCAAACCAA
TCTATTGAGAAAGTTGAGGTGTTGCAATCTAGGACTTATCCATTATTTGTTCCATGGAAA
GGTGGAGTGATTTTGGGTGTCCTTGATATTGGTAGGGATGCATGGATTCATAGAGAAGAC
TGGATTAAAAATGGTGTCCACATCGGGAGTGGCAGAAAATATAAGGATTCCTATTTTCTT
CAGGCGCAAGTAATGTGCTACTACAATATATGACAGGTGCTTTCTCTCTGTCCCTGTTTG
TGTTATGTACATGTTATAAATATTCATGCAATCAAGTATTGACCAAGTTGTATCCTAACA
TCTGTGTTTTCGGTACAAAGAATCATGGTTTAGTTTCATGGAATGGCTCTTGATGCTAAT
GGATTTCTTGGAAGGAATTTTTAGGACTTTATTTCAAACAGCATGATTATCAGATCCATT
TCATTGTGACCTTGAGTTTGGTGGATGCTTTTCTTTCTTTAACATATGAGCCTAGTTACG
CATTAGATTAGACATACGAAAACAAACCCAAGCCCAACAACTTGGCTGTTTTTGGTTAAA
CTGGTTTGTGCATGGAGGTCAATAATTCTTATCAACTTTTTTCTCTATATTATATTATCC
TATCTTATTACCGAGCCCCTAACACATCAAGATATACAGGTTGTTCGACTGCAAACCATC
TTAGAACATGATCGGTGGACTGCGATTAACTTGCGTACACGATGCATCAGTTTCATTGAT
GCTGGCTGCTGTATTTTTGGGTTCGGAGGTCGGTCATCAACCCGAGACCTGGACTAAGGG
CTGGTTGTTCGCTCAAGCACTTTGATGTTTCTGTTAGAAGTACACCAGTCTTCTGGCGTT
CTAAAGATGTACTAGTATAACATATAGTACTCAAATTTCTACAGTAATTTAATTCCTTGC
CAATGGTGTTACCTATTGACTTTGATTTGCGGATGTTTGGGTTCGTAGTTTAATTCCAAT
GATGATAAATATATAAATGCATTCTCAGCCCTTT