Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU81208
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:5641631:5647001:-1 gene:SORBI_3006G027500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCGCTTAAAACAACGGTTCGGCCGTCGGCCAAGGCGGCAGGGCATCACTATGCAGGA
CACCACCAGGTGTGGTGTTTGTCGGCGCCGCCGGCGAAACAGGATGCAGCGAAACCACGT
CGCCGGTCGGCGAACTACCGGCCCACGTCCTGGGACTACGACGCCCTTCTGTCACTCGCT
TCTGGCAGACCTAATCTGCAGGATTGTCCTTCTAGTTATTATAAGCTGAAGACCAACATA
AGAGATATGTTGATCAAGAAAGCAGAACCATTTTCTAAACTTTGGACCATTGATGCAATG
CAACGACTTGGTATCTCTTACCATTTTCAGGATGAGATTAGTAACATCCTGTACTCCATC
TCCAATGAGAGTGCAAAAGATCACACATATGACAACATTGCTTTCACAGCCTTAAAATTC
AGGTTACTCAGGGAAAATGGTTTCCCAGAAACCCTAGGCTACAATTTTAATGTTGCAGGG
CAATTGGGCTACCATAATTATGGGAACTGCACCACCAAGACACCAAGACAGGAGGATGTA
AACACACTTCTTTTGCTACATGAGGCCTCATATCTAGCATTTGGAGATGAAGAAATATTG
GATGTAGCAAGGACATATTCAGCTAAAGCACTTAAAGAACTTATGCCGTCAATGCTGCCA
CACTTAAGGGAGGCTGTGGCGCATGCTTTAGAAATTCCACTGCATTGGAGAGCTCCAAGA
CTAGAAACAAGGTGGTTCATTGATTACTATGCTAGAGACATTAACATGTGCCCGTTGCTC
CTCCAATTCGCTAAACTAGACTTCAACCAGGTTCAAGATGAGCATCAGAAAGATCTTGCT
GCGGTAACATGGTGGTGGAGGAACATTGGGCTTGGTGAAAAGCTGCCATTTGCAAGGGAT
CGTCTGATGGAGTGCTTCCATTATGCAAATGGAATTGTTTGGGATCCGAAGCTTGGACCA
TGTCGTCAAATGCTTGCTAAAGTTTCCAATCTAATTGTTCACTTGGATGATGTTTATGAT
GTGTATGGAACCATGGATGAACTTGTACTCTTCACAAATGCGATTGCAAGGTGGGATGCA
ATACCAAATGAGAGACTCCCAGAGTACATGAAAGCACTTTATTCAGTTATATATCACACC
TCAAATGAAGTTGCTGAACATGCTTTGAAGGAACATGGTTGTAGTATGCATTATCATCTA
CAAAAATTGTGGCATGACATATGCATGGCATTTTTGCTGGAGGCAAAATGGCACCATGGT
AACTGTAGACCAAGCATTCAAAAGTATCTGGAGAATGGATGGGTGTCATCCTCTGCACCA
TTGTTGCTGTCACATGCCTTCTCAATGCTCCATTCAGTTATCAACATGAACACAATATCC
AAAATGCAAACGACACACAGATTAGTTCAACAGGTTTCTTTAATTTTTCGTCTCTGCAAT
GACTCTGCAACACACATGGATGAGTTGCAGAGAGGAGATGCTCCATCTTTCATAGCTATA
AACATGGCCGAGAATGGTGGCAATGAGGATGATTCTCGTAAGGTCATGCAAGATCTTATC
TTGAAGTCATGGAAAGTGATCAATGAGGAGGCATTTGATAGTCGTCAATATTCTACACCC
TTTAACAAAGCTTGTGTTAACTTGGCTCGCATCTCACATTGTGTTTATCAAGGTGGAGAT
GGTATTGGTAGACCAAATGATCTAAAGAAGAGGCAAATTAGAGATTTGTTCTTGGATCCC
GTCCATATATGA

Peptide Sequence

PEP ID

OQU81208
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:5641631:5647001:-1 gene:SORBI_3006G027500 transcript:OQU81208 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSLKTTVRPSAKAAGHHYAGHHQVWCLSAPPAKQDAAKPRRRSANYRPTSWDYDALLSLA
SGRPNLQDCPSSYYKLKTNIRDMLIKKAEPFSKLWTIDAMQRLGISYHFQDEISNILYSI
SNESAKDHTYDNIAFTALKFRLLRENGFPETLGYNFNVAGQLGYHNYGNCTTKTPRQEDV
NTLLLLHEASYLAFGDEEILDVARTYSAKALKELMPSMLPHLREAVAHALEIPLHWRAPR
LETRWFIDYYARDINMCPLLLQFAKLDFNQVQDEHQKDLAAVTWWWRNIGLGEKLPFARD
RLMECFHYANGIVWDPKLGPCRQMLAKVSNLIVHLDDVYDVYGTMDELVLFTNAIARWDA
IPNERLPEYMKALYSVIYHTSNEVAEHALKEHGCSMHYHLQKLWHDICMAFLLEAKWHHG
NCRPSIQKYLENGWVSSSAPLLLSHAFSMLHSVINMNTISKMQTTHRLVQQVSLIFRLCN
DSATHMDELQRGDAPSFIAINMAENGGNEDDSRKVMQDLILKSWKVINEEAFDSRQYSTP
FNKACVNLARISHCVYQGGDGIGRPNDLKKRQIRDLFLDPVHI

Transcript Sequence

Transcript ID

OQU81208
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:5641631:5647001:-1 gene:SORBI_3006G027500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCGCTTAAAACAACGGTTCGGCCGTCGGCCAAGGCGGCAGGGCATCACTATGCAGGA
CACCACCAGGTGTGGTGTTTGTCGGCGCCGCCGGCGAAACAGGATGCAGCGAAACCACGT
CGCCGGTCGGCGAACTACCGGCCCACGTCCTGGGACTACGACGCCCTTCTGTCACTCGCT
TCTGGCAGACCTAATCTGCAGGATTGTCCTTCTAGTTATTATAAGCTGAAGACCAACATA
AGAGATATGTTGATCAAGAAAGCAGAACCATTTTCTAAACTTTGGACCATTGATGCAATG
CAACGACTTGGTATCTCTTACCATTTTCAGGATGAGATTAGTAACATCCTGTACTCCATC
TCCAATGAGAGTGCAAAAGATCACACATATGACAACATTGCTTTCACAGCCTTAAAATTC
AGGTTACTCAGGGAAAATGGTTTCCCAGAAACCCTAGGCTACAATTTTAATGTTGCAGGG
CAATTGGGCTACCATAATTATGGGAACTGCACCACCAAGACACCAAGACAGGAGGATGTA
AACACACTTCTTTTGCTACATGAGGCCTCATATCTAGCATTTGGAGATGAAGAAATATTG
GATGTAGCAAGGACATATTCAGCTAAAGCACTTAAAGAACTTATGCCGTCAATGCTGCCA
CACTTAAGGGAGGCTGTGGCGCATGCTTTAGAAATTCCACTGCATTGGAGAGCTCCAAGA
CTAGAAACAAGGTGGTTCATTGATTACTATGCTAGAGACATTAACATGTGCCCGTTGCTC
CTCCAATTCGCTAAACTAGACTTCAACCAGGTTCAAGATGAGCATCAGAAAGATCTTGCT
GCGGTAACATGGTGGTGGAGGAACATTGGGCTTGGTGAAAAGCTGCCATTTGCAAGGGAT
CGTCTGATGGAGTGCTTCCATTATGCAAATGGAATTGTTTGGGATCCGAAGCTTGGACCA
TGTCGTCAAATGCTTGCTAAAGTTTCCAATCTAATTGTTCACTTGGATGATGTTTATGAT
GTGTATGGAACCATGGATGAACTTGTACTCTTCACAAATGCGATTGCAAGGTGGGATGCA
ATACCAAATGAGAGACTCCCAGAGTACATGAAAGCACTTTATTCAGTTATATATCACACC
TCAAATGAAGTTGCTGAACATGCTTTGAAGGAACATGGTTGTAGTATGCATTATCATCTA
CAAAAATTGTGGCATGACATATGCATGGCATTTTTGCTGGAGGCAAAATGGCACCATGGT
AACTGTAGACCAAGCATTCAAAAGTATCTGGAGAATGGATGGGTGTCATCCTCTGCACCA
TTGTTGCTGTCACATGCCTTCTCAATGCTCCATTCAGTTATCAACATGAACACAATATCC
AAAATGCAAACGACACACAGATTAGTTCAACAGGTTTCTTTAATTTTTCGTCTCTGCAAT
GACTCTGCAACACACATGGATGAGTTGCAGAGAGGAGATGCTCCATCTTTCATAGCTATA
AACATGGCCGAGAATGGTGGCAATGAGGATGATTCTCGTAAGGTCATGCAAGATCTTATC
TTGAAGTCATGGAAAGTGATCAATGAGGAGGCATTTGATAGTCGTCAATATTCTACACCC
TTTAACAAAGCTTGTGTTAACTTGGCTCGCATCTCACATTGTGTTTATCAAGGTGGAGAT
GGTATTGGTAGACCAAATGATCTAAAGAAGAGGCAAATTAGAGATTTGTTCTTGGATCCC
GTCCATATATGA