Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU81173
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:3462480:3464798:-1 gene:SORBI_3006G020350 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGTTCCCTCCTCCAGCTCTTGCGAGGTGGTGGACCTCGCCTTGGCAGCGAGCTGC
GACGACGACGCAACCTCACAGCTCTTCTTCAGCAAAGGCGGCGGCGGCAGCGGCGGCGGC
GGCGGCGGCGGTGACTTATTGTCTTGGCCTGCGGCGGCGGAGATCGAGTCCAAGCTGACG
AAGCAAGAATCACTGGTTACCCTGTGCGACAACTACGGGATTCCCAGGGAGTTCAAGCCG
GTGTCCGCCGACACCTTGAGGTGCGGGGTGTGCGAGACGCCGCCGCAGGGCTCGAATGCC
CTGTGCATCTACTCCGACGCCGTCGACGCCGGCCTCCGATTCCCACTCCACGACTTCTAC
CTCAAGCTCCTCCGCCACTACCGCCTGGCGCCGACCCAGTTGGTCCCCAATGCGTGGAAG
TACATGGCTGCGTTCGTGCTCCGCTGCAAGGACGCCGGCGTCGAGCCGCTGGTCTCCGCC
TTCAGATACTTCTTCTCCCTGTACGCTCACTACAAGCACAAGAACCAGCCAACGGGGTGG
CACCATTTCCAGCCCTGCGCCGGCCGTCCCCGCCTCTTCTCCGGCACTCTGCCCACGAGG
CACGACTGGAAAACAAGGTTCTTCTTCCTCAAGTCCCCGGAAGGGATGCCGTGGAAGTGT
CCGGTGGCGTGGGGCAAGCCCAGGATGGAGGACGCCCGTGCAGTGGAGCTCACGGATGCC
GCGGTAGACAAGCTGAAGCAGATGCCGTGCATCGATTTGAAGGACTACTTGAGCCTCCAC
GCCCCGCCCGTCGGCGCGTTCACCATGCTGCAGCTGCACTCCACGGCGCCGCCAGCGGCC
ATCGTGAAACCGGAATGCGCAGCGGCCAGCGCTACCGCCGCCGGCGATGGTGACGACGAC
TCGACGACGACGCCTCGGAAGCGCAGGTGTCCTGGTGGTCCGAGTCCGGCGGCCCTGACG
CCTCAAAGCTTTACCATTTCCGGCGGTACACCGGGTACATCATTCGATGGAGCCGCCTCA
GGCAGCAACGGGATCCCACTGCCGCCGGGGATTTGGACCGGCGGCGGCGGCAACTCGGAG
TTGATCATGTACGGCATGGTGCGAATGCAGCAAGACGAGCAGCGGGACAAAGACAACCAG
ATCGCCCAGCTTCACGTCAGGTTACAAGAGTCGGAGGCCAAGCTACGAGAGTCTCAGGCA
AAGTTACGAGAGTCTGAGGCTGTGAGTGACAGGTTCTTCGAGTACCTGTATAAGGAAAGA
GCGCGGCTGATCGAGGAGCAGGCGGCCGTCGTTGCCCGTGTGAAGGCAGAGCGCGCCGCC
GATGTCGCGAAGCTCCAGGAGGAGCACGCCGCTGCAGTGGTACAGCTCACGAAGCGCCTC
AACGAGGAGCACGCGGCCAGCGTCTCTCGGCTCAATGAGGAGCACGCGGCTGACCTAGCT
CGTGTGATGGATGCCGCGGAGAAGAAGGTGCAAGATGTCATGAAGAATGTGGTGCGCAGC
CTGTACCCTGAAGCGGACCTGTCACAGCTCGAAGGCCCAAAGAGAAGTTAG

Peptide Sequence

PEP ID

OQU81173
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:3462480:3464798:-1 gene:SORBI_3006G020350 transcript:OQU81173 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAVPSSSSCEVVDLALAASCDDDATSQLFFSKGGGGSGGGGGGGDLLSWPAAAEIESKLT
KQESLVTLCDNYGIPREFKPVSADTLRCGVCETPPQGSNALCIYSDAVDAGLRFPLHDFY
LKLLRHYRLAPTQLVPNAWKYMAAFVLRCKDAGVEPLVSAFRYFFSLYAHYKHKNQPTGW
HHFQPCAGRPRLFSGTLPTRHDWKTRFFFLKSPEGMPWKCPVAWGKPRMEDARAVELTDA
AVDKLKQMPCIDLKDYLSLHAPPVGAFTMLQLHSTAPPAAIVKPECAAASATAAGDGDDD
STTTPRKRRCPGGPSPAALTPQSFTISGGTPGTSFDGAASGSNGIPLPPGIWTGGGGNSE
LIMYGMVRMQQDEQRDKDNQIAQLHVRLQESEAKLRESQAKLRESEAVSDRFFEYLYKER
ARLIEEQAAVVARVKAERAADVAKLQEEHAAAVVQLTKRLNEEHAASVSRLNEEHAADLA
RVMDAAEKKVQDVMKNVVRSLYPEADLSQLEGPKRS

Transcript Sequence

Transcript ID

OQU81173
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:3462480:3464798:-1 gene:SORBI_3006G020350 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCGGTGGGTGTGACACACTTCGAACCAAGGCTTGCTTCGAACCCGCAGCCCGCAACAAGA
TTTCGACTACAATGGCGGTTCCCTCCTCCAGCTCTTGCGAGGTGGTGGACCTCGCCTTGG
CAGCGAGCTGCGACGACGACGCAACCTCACAGCTCTTCTTCAGCAAAGGCGGCGGCGGCA
GCGGCGGCGGCGGCGGCGGCGGTGACTTATTGTCTTGGCCTGCGGCGGCGGAGATCGAGT
CCAAGCTGACGAAGCAAGAATCACTGGTTACCCTGTGCGACAACTACGGGATTCCCAGGG
AGTTCAAGCCGGTGTCCGCCGACACCTTGAGGTGCGGGGTGTGCGAGACGCCGCCGCAGG
GCTCGAATGCCCTGTGCATCTACTCCGACGCCGTCGACGCCGGCCTCCGATTCCCACTCC
ACGACTTCTACCTCAAGCTCCTCCGCCACTACCGCCTGGCGCCGACCCAGTTGGTCCCCA
ATGCGTGGAAGTACATGGCTGCGTTCGTGCTCCGCTGCAAGGACGCCGGCGTCGAGCCGC
TGGTCTCCGCCTTCAGATACTTCTTCTCCCTGTACGCTCACTACAAGCACAAGAACCAGC
CAACGGGGTGGCACCATTTCCAGCCCTGCGCCGGCCGTCCCCGCCTCTTCTCCGGCACTC
TGCCCACGAGGCACGACTGGAAAACAAGGTTCTTCTTCCTCAAGTCCCCGGAAGGGATGC
CGTGGAAGTGTCCGGTGGCGTGGGGCAAGCCCAGGATGGAGGACGCCCGTGCAGTGGAGC
TCACGGATGCCGCGGTAGACAAGCTGAAGCAGATGCCGTGCATCGATTTGAAGGACTACT
TGAGCCTCCACGCCCCGCCCGTCGGCGCGTTCACCATGCTGCAGCTGCACTCCACGGCGC
CGCCAGCGGCCATCGTGAAACCGGAATGCGCAGCGGCCAGCGCTACCGCCGCCGGCGATG
GTGACGACGACTCGACGACGACGCCTCGGAAGCGCAGGTGTCCTGGTGGTCCGAGTCCGG
CGGCCCTGACGCCTCAAAGCTTTACCATTTCCGGCGGTACACCGGGTACATCATTCGATG
GAGCCGCCTCAGGCAGCAACGGGATCCCACTGCCGCCGGGGATTTGGACCGGCGGCGGCG
GCAACTCGGAGTTGATCATGTACGGCATGGTGCGAATGCAGCAAGACGAGCAGCGGGACA
AAGACAACCAGATCGCCCAGCTTCACGTCAGGTTACAAGAGTCGGAGGCCAAGCTACGAG
AGTCTCAGGCAAAGTTACGAGAGTCTGAGGCTGTGAGTGACAGGTTCTTCGAGTACCTGT
ATAAGGAAAGAGCGCGGCTGATCGAGGAGCAGGCGGCCGTCGTTGCCCGTGTGAAGGCAG
AGCGCGCCGCCGATGTCGCGAAGCTCCAGGAGGAGCACGCCGCTGCAGTGGTACAGCTCA
CGAAGCGCCTCAACGAGGAGCACGCGGCCAGCGTCTCTCGGCTCAATGAGGAGCACGCGG
CTGACCTAGCTCGTGTGATGGATGCCGCGGAGAAGAAGGTGCAAGATGTCATGAAGAATG
TGGTGCGCAGCCTGTACCCTGAAGCGGACCTGTCACAGCTCGAAGGCCCAAAGAGAAGTT
AGAGGAGTATAACGAGCATATGTGCGTGGTTCATCATCTACCCATCATCTATCTACTGGA
TATTTCTGTTAGATGTCTGATTCATTCATCTCTCCGTTATGAGAAGCTACTTGATAGTTT
GGCACCACAGTTATTTAAGGACACAAAGGTGTCTAATTCACGTGATTTGATAGTGTTTTT
CTAGCATTGAACTGAAGTTTGGGGCATCTAGCTAGCTCGTTGTTTTCAGCTAAGTAAGCC
ATGCCGCAACTACAAATATGGTTTCCCAAAGAAAACAGATAATATACCAAAGTAGTTATG
CAGTCTGATCTCCTGATTCCATTTTGAACGTTTTCAGGTTACCAGTTTCTGATTGTTCAA
GGACAAATTGTGCTTCTTGCATTGATCCAAAGATGTCGTTCAGGGGGAAGGGCCCTGAGA
TAAGGCAAGGCGATCTGGTGCAGTTCAACTACGTCTGTAGCTACACAAATGGTTACTTCA
TGCATAGGTGTATGGAATTCTAATTCTAGTGTTGACTGTTGAGTACATACATTGCAGTTT
TAGCTCGAGTCCAGTTATCTGCAGCCACCACCCGGAGCGAGGGCCATCCGGCCATGGCCA
TCGCTGGTCGCATCTGCTGGCCGCCCATGATCGATCTAGCACGTCCTGGCTGCGGCTGGC
CGTGGCCGGCTGCTGGCCGCCCTGTGTAGTGATGTCTCA