Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU81048
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:6:569889:571965:1 gene:SORBI_3006G003500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCGTGACGGACGTGGAGGGCACGGCGGCGCCGGCGGCATTGGAGTTGGAGGTGCCC
GCGAAGCGCAGTATCCTACGGTACAACTCGCCGCTGGCGCAGGTGTCCCTGCTGGGGCTC
ATCTGCTTCTGCTGCCCCGGCATGTTCAACGCGCTGTCCGGCCTGGGCGGCGGCGACCAA
GTCGACGCCTCCACGGCCGACAAGGCCAACACGGCGCTCTACGCCTGCTTCGCCGTCTTC
GCCATCCTCGGCGGCGGCGCGCAGAACCTCCTTGGCCCGCGCGCGACGCTGATGCTGGGC
GCGCTCACCTACCCACTCTACGCCGGCTCCTTCCTCTACTACAAGCACCACCCGGAGTCG
CAGGCGTTCCCCGTCACGGCGGGCGCGCTGCTCGGCGCCGGCGCGGGTTTCCTCTGGGCG
GCGCAGGGCGCCGTGATGACCTCGTACCCGCCGCCTAACCGCCGGGGCACCTACATCTCC
CTCTTCTGGTGCATCTTCAACCTCGGCAGCGTCCTCGGCGGTCTCCTCCCTTTCTCCTTC
AACTACCACCGCAGCAACAAGCAGCCTGCCAGTGTCGTCAACAACAGCACGTACATCGCC
TTCATAGCCTTCATGCTCGTCGGCGCCGGGCTCACCGTGCTCGTGCTGCCGCCGGCCAAG
ATCGTCCGCGACGACGGCACCAAGGCCACTACTACCACTAGTAGGGTCGTCGTCGTCCCC
TTCTCGTCCCCGGCCGCCGCCGAGGGCGCCGAGATCCTCAAGCTCTTCACCAACTGGAAG
ATGCTGCTCGTGCTCCTGCCCGCCTGGGCTAGCTCTTCTACCGGAACGCTCTTCTTCTAC
ACCGACCAGTTCAACGGCGGCGTCTTCACGCTCCGCACCAAGGGGCTCAACAACGTCGTC
TTCTGGGGTGCGCAGATGATCGGCTCCGCCGGCATCGGCTACTTCCTCGACTTCGGATTC
GCCAGCCGGAGGAAGAGAGGGCTGTTCGGAGTCGTCGCCGTCGCCGTCGTCGGAACGGCC
ATCTGGGGAGGCGGTCTGGCGAACCAGCTCAAGTACAGAGGAGTGGAGTTGGTCGACCCC
ATCGATTTCAAGGACGGCCACCACCGCTACGCCGGGCCGTTCATGCTCTACTTCTGCTAC
GGACTGCTGGATGCCATGTTCCAGACCGTCATCTACTGGATCATCGGCGCCCTCGCCATT
AATGACTCCCAAATTCTCAGCAGGTACGTTGGGTTCTTCAAGGGAGTGCAGAGCGCGGGA
GCGGCAGTGGCATGGCAAGTGAACAGGCGCCACACGCCGCTAAGATCCCAGCTGATTGTG
AACTGGGCGCTCATTACCGTTAGCTACCCCTTGCTTGCACTGCTGGTGTTCGTGGCCGTG
AAGGACGAGGACTACTCGGTTTCTTCAGTGGAGGACGGCAAGGAGAATGATAGTAATTAA

Peptide Sequence

PEP ID

OQU81048
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:6:569889:571965:1 gene:SORBI_3006G003500 transcript:OQU81048 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAVTDVEGTAAPAALELEVPAKRSILRYNSPLAQVSLLGLICFCCPGMFNALSGLGGGDQ
VDASTADKANTALYACFAVFAILGGGAQNLLGPRATLMLGALTYPLYAGSFLYYKHHPES
QAFPVTAGALLGAGAGFLWAAQGAVMTSYPPPNRRGTYISLFWCIFNLGSVLGGLLPFSF
NYHRSNKQPASVVNNSTYIAFIAFMLVGAGLTVLVLPPAKIVRDDGTKATTTTSRVVVVP
FSSPAAAEGAEILKLFTNWKMLLVLLPAWASSSTGTLFFYTDQFNGGVFTLRTKGLNNVV
FWGAQMIGSAGIGYFLDFGFASRRKRGLFGVVAVAVVGTAIWGGGLANQLKYRGVELVDP
IDFKDGHHRYAGPFMLYFCYGLLDAMFQTVIYWIIGALAINDSQILSRYVGFFKGVQSAG
AAVAWQVNRRHTPLRSQLIVNWALITVSYPLLALLVFVAVKDEDYSVSSVEDGKENDSN

Transcript Sequence

Transcript ID

OQU81048
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:6:569889:571965:1 gene:SORBI_3006G003500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTCAATTTTAACCAAAATTATAAAAAAAATTACAAAGTTTTGTGGTATCAAATAGATATA
CTATGAAAATATAATTAATCAATAATCTAACGATACTTAGTTAATATCATAAATATTATT
ATCCTACCATACAAATTTGATCAAACTTGACATGTTTTAATTTTCGACTTATTTGTGATG
GAGCAAGTAGTGAAGATGAGGTGTGCTAAACCGAACCTTATTCGTCATATTTTGGATTGT
TCGTCTCCGTACCCAAAATCCAAATGGCTACGAGAAAACTAAACAAATCACGAGAGGATT
CATTGATCCACCTCCCCTATCTTCTCCTATATACATATATGCCACTCTCCGTCTGCACCT
TGGTCTCCGTCACTGATTCCATCAGGCGACGGCCACCCTGACTCCCCTGACCGGCCGGCG
CGCGGCTAAGATGGCCGTGACGGACGTGGAGGGCACGGCGGCGCCGGCGGCATTGGAGTT
GGAGGTGCCCGCGAAGCGCAGTATCCTACGGTACAACTCGCCGCTGGCGCAGGTGTCCCT
GCTGGGGCTCATCTGCTTCTGCTGCCCCGGCATGTTCAACGCGCTGTCCGGCCTGGGCGG
CGGCGACCAAGTCGACGCCTCCACGGCCGACAAGGCCAACACGGCGCTCTACGCCTGCTT
CGCCGTCTTCGCCATCCTCGGCGGCGGCGCGCAGAACCTCCTTGGCCCGCGCGCGACGCT
GATGCTGGGCGCGCTCACCTACCCACTCTACGCCGGCTCCTTCCTCTACTACAAGCACCA
CCCGGAGTCGCAGGCGTTCCCCGTCACGGCGGGCGCGCTGCTCGGCGCCGGCGCGGGTTT
CCTCTGGGCGGCGCAGGGCGCCGTGATGACCTCGTACCCGCCGCCTAACCGCCGGGGCAC
CTACATCTCCCTCTTCTGGTGCATCTTCAACCTCGGCAGCGTCCTCGGCGGTCTCCTCCC
TTTCTCCTTCAACTACCACCGCAGCAACAAGCAGCCTGCCAGTGTCGTCAACAACAGCAC
GTACATCGCCTTCATAGCCTTCATGCTCGTCGGCGCCGGGCTCACCGTGCTCGTGCTGCC
GCCGGCCAAGATCGTCCGCGACGACGGCACCAAGGCCACTACTACCACTAGTAGGGTCGT
CGTCGTCCCCTTCTCGTCCCCGGCCGCCGCCGAGGGCGCCGAGATCCTCAAGCTCTTCAC
CAACTGGAAGATGCTGCTCGTGCTCCTGCCCGCCTGGGCTAGCTCTTCTACCGGAACGCT
CTTCTTCTACACCGACCAGTTCAACGGCGGCGTCTTCACGCTCCGCACCAAGGGGCTCAA
CAACGTCGTCTTCTGGGGTGCGCAGATGATCGGCTCCGCCGGCATCGGCTACTTCCTCGA
CTTCGGATTCGCCAGCCGGAGGAAGAGAGGGCTGTTCGGAGTCGTCGCCGTCGCCGTCGT
CGGAACGGCCATCTGGGGAGGCGGTCTGGCGAACCAGCTCAAGTACAGAGGAGTGGAGTT
GGTCGACCCCATCGATTTCAAGGACGGCCACCACCGCTACGCCGGGCCGTTCATGCTCTA
CTTCTGCTACGGACTGCTGGATGCCATGTTCCAGACCGTCATCTACTGGATCATCGGCGC
CCTCGCCATTAATGACTCCCAAATTCTCAGCAGGTACGTTGGGTTCTTCAAGGGAGTGCA
GAGCGCGGGAGCGGCAGTGGCATGGCAAGTGAACAGGCGCCACACGCCGCTAAGATCCCA
GCTGATTGTGAACTGGGCGCTCATTACCGTTAGCTACCCCTTGCTTGCACTGCTGGTGTT
CGTGGCCGTGAAGGACGAGGACTACTCGGTTTCTTCAGTGGAGGACGGCAAGGAGAATGA
TAGTAATTAATAGGCTGTCAGCACCAACCAGCACTATGTAAAAAAAAAAAAAGCAAATAG
CAGACACTCCCTACAAGTGACGCGAGAACAAAACGCGTCTGTAATACGTGGTCACAGACG
CGCCTAGACAAAAACGCGTCTGTAATATGTGATCCTACATGGTGGTACCTGTTTCCATTT
AATCGGTCATTTTGACTGTCTAAGTAGCCCTTTTGCC