Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU80990
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:64728974:64733846:-1 gene:SORBI_3007G219100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCTGTGAGCCATGCGGAGGACATTGAGATATCGCTGTGCGACGGCAACTCGGAGGAC
GAGCGGCGGCGGCGCAAGATCGGCTCGCTGCGGCGGAAGGCCATCCACGCACTCAAGAAG
CGAGGGAGGCGTCGCGTCGACTTCCGCTTCCCGCCGGCGGCCATCTCCATCGAGGACGTC
CGCGACGCCGAGGAGGAGCGCGCCGTCGCCTCCTTCCGGGAACGCCTCGCCGCGCACGGC
CTCCTCCCCGAGAAGCATGATGACTACCACATGATGCTAAGGTTCCTGAAGGCCAGGAAG
TTCGAAGCCGAGAAGGCAATGCAGATGTGGTCAGAGATGCTGAAATGGAGGAAGGAGTTC
GGAACTGACACCATCCTTGAGGATTTTGAGTTTGAGGAACTGGATGATGTGCTGCGCTAC
TACCCTCAGGGCTACCATGGTGTTGACCGCGAAGGCCGACCGGTGTACATTGAGAGGCTT
GGGAAGGTGGATCCAAACAAGCTCATGCAGATCACGTCGGTGGATCGCTACATCAAGTAC
CATGTCCAGGAGTTTGAGAGGGCCTTCAGGGAGAGGTTCCCTGCTTGCACATTGGCTGCT
AAGAGGCACATTGACTCCACCACTACCATCTTGGACGTCCAGGGTGTGGGGTTTAAGAAT
TTCTCCAAGACTGCAAGAGAACTAGTACACCGGATGCAGAAGATTGATAGTGACTATTAT
CCTGAGACACTCCACCAAATGTTTGTTGTGAACGCTGGTAGTGGATTCAAGTGGATCTGG
AACAGCGTGAAGGGCTTCCTTGACCCTAAAACTTCATCCAAGATTCATGTGCTCGGTTCG
AACTACCAGAGCAGGCTTCTTGAAGTAATAGATTCGAGTGAGTTGCCAGAATTCCTTGGT
GGTTCATGCACATGTAGTGACAAGGGTGGTTGTCTTGGATCGAACAAAGGGCCGTGGAAT
GATCCTTATATATTGAAGCTGATACACAGTTTGGAGGCTGGATGCGCGAGGGAAATCAAG
CCTGTGTCTGAGGGGGAGGAAAGAAGCAGCTCTTCTCTTCGGTTGGAGCAGTTGAAATGG
CAGGGCATGTTAAGTGACACTTCAAATGCTGAATCAGGATCTGATGTTGATGATTTTGGT
CCATATGTTCAGAAAGTTTCGGACTACGGTTGCTTGACTCCAGTCCATGAGGAAGTAAAG
GGCACAGATTGTGCAACATACTTAAGCTGTGATGATCAAAGTCACCCGGATATGGCTCCT
GAATCTTACCATGGAGTGCGACGAACTACTGAAATGGTGCAGAAACCAATGGCTGATTTC
AGGCAATATTCCACCAACAGAAGGCCTCGTGATTTAGGGAACAATGCTCTGAATGTCAAC
GACACAGTTGTTGAAAGGGGCTGGGAAAATGTAGTGAAGCTAGTAGTTACAGCGTTGATC
AAGCTCTTTTCCTTCATCCGGCTTTTCATCTCTAGAGCTGAGGGGAGGCTTGAGAACGTC
AATGGCCCTGCTCGACCAGCAACACCAGCAGCAGAGAAGCCAAAGCCTCGAGTCGTCAGT
GATGAAGAGGTGTGCGCCTGTTTACAGCGTATCGACAATCTCGAATTGCTGTGCAATCAC
CTTGCCACCAAACCACCACAGATCCCAGAGGACAAGGAACGCATTCTGTTGAACTCATTT
GAGCGGATCAGATCCGTTGAGGCTGACCTTGAGAGGACCAGAAGACTGTTGAATGCGACC
GTGGCCAAGCAGAAGGCATTGGTGGAGACTCTGGAATCTGTACAGGAGTCGTCTAGAGTC
AAGAAGCGGATGTTCTGTTCATAG

Peptide Sequence

PEP ID

OQU80990
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:64728974:64733846:-1 gene:SORBI_3007G219100 transcript:OQU80990 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSVSHAEDIEISLCDGNSEDERRRRKIGSLRRKAIHALKKRGRRRVDFRFPPAAISIEDV
RDAEEERAVASFRERLAAHGLLPEKHDDYHMMLRFLKARKFEAEKAMQMWSEMLKWRKEF
GTDTILEDFEFEELDDVLRYYPQGYHGVDREGRPVYIERLGKVDPNKLMQITSVDRYIKY
HVQEFERAFRERFPACTLAAKRHIDSTTTILDVQGVGFKNFSKTARELVHRMQKIDSDYY
PETLHQMFVVNAGSGFKWIWNSVKGFLDPKTSSKIHVLGSNYQSRLLEVIDSSELPEFLG
GSCTCSDKGGCLGSNKGPWNDPYILKLIHSLEAGCAREIKPVSEGEERSSSSLRLEQLKW
QGMLSDTSNAESGSDVDDFGPYVQKVSDYGCLTPVHEEVKGTDCATYLSCDDQSHPDMAP
ESYHGVRRTTEMVQKPMADFRQYSTNRRPRDLGNNALNVNDTVVERGWENVVKLVVTALI
KLFSFIRLFISRAEGRLENVNGPARPATPAAEKPKPRVVSDEEVCACLQRIDNLELLCNH
LATKPPQIPEDKERILLNSFERIRSVEADLERTRRLLNATVAKQKALVETLESVQESSRV
KKRMFCS

Transcript Sequence

Transcript ID

OQU80990
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:64728974:64733846:-1 gene:SORBI_3007G219100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTACCAACACCAGAAGGAGCAAACTGAGAGGAGACAGAGCGGCACAGTTGGAGAGAGAGA
GAGGCAGAAGGAGCACGGGAGCAGGGGAAGGGAGAGAGAGAAAGCGCCAAGCCTCCAATC
TCTCGCCTCTCCTGCTGCCAAGGTTCTTGATTGATTCCAATCCACCCAAAACAAAATGTG
AGTTCTTCTCATCCTCCCCTGTCCCGCGAGAGATTTTTTTTACTGGGTTTTGTTTCGTGG
ATGGGATCTGTTTTGCGCGACGATCTGTCTCCCTGTTCGCGCAGGTGTTTTGTTTTGTTT
GCGGGGGGTGCGCGGTGCCGGACCGATTGGAGCTGTCATGTCAGTCTTGATCTTCGTTTT
TATTCTGCTCAGAAGGAAGTTCCTCCTGGGTTGGGAGGGAGTAAATGAGCGGCGCCTTCC
CTCCCTTGTCGATACATGCTGTTCCTCTGGGTGGAATTTATGGCGACTCGGACGCCACGC
TGCTTTTAGTAGTAACCAATGCAGGTTCCTCCTCAGGGCCTGGAAGCTGCAATCTTTTTT
TGGCAACGAGATTTGGTCCCTAACCTCCCCCTCCGTTTCTTCCTGCTCAGATCTGTTTCC
GTGGCACAAGGCTCGGACTGCGCTACCAAAATGGTTGCTGTGGCGAACTGATCATTGCTA
GTGTTTCTTTTTCTCTCCCGCAGACAGTGGCGATTGAAGGTTAGGTGCCAGAGCGCGACG
TCGAGGTCTCAGCTGGGATATCCAGGAATCCTGAATTGACGGCGGCGAAGATGTCTGTGA
GCCATGCGGAGGACATTGAGATATCGCTGTGCGACGGCAACTCGGAGGACGAGCGGCGGC
GGCGCAAGATCGGCTCGCTGCGGCGGAAGGCCATCCACGCACTCAAGAAGCGAGGGAGGC
GTCGCGTCGACTTCCGCTTCCCGCCGGCGGCCATCTCCATCGAGGACGTCCGCGACGCCG
AGGAGGAGCGCGCCGTCGCCTCCTTCCGGGAACGCCTCGCCGCGCACGGCCTCCTCCCCG
AGAAGCATGATGACTACCACATGATGCTAAGGTTCCTGAAGGCCAGGAAGTTCGAAGCCG
AGAAGGCAATGCAGATGTGGTCAGAGATGCTGAAATGGAGGAAGGAGTTCGGAACTGACA
CCATCCTTGAGGATTTTGAGTTTGAGGAACTGGATGATGTGCTGCGCTACTACCCTCAGG
GCTACCATGGTGTTGACCGCGAAGGCCGACCGGTGTACATTGAGAGGCTTGGGAAGGTGG
ATCCAAACAAGCTCATGCAGATCACGTCGGTGGATCGCTACATCAAGTACCATGTCCAGG
AGTTTGAGAGGGCCTTCAGGGAGAGGTTCCCTGCTTGCACATTGGCTGCTAAGAGGCACA
TTGACTCCACCACTACCATCTTGGACGTCCAGGGTGTGGGGTTTAAGAATTTCTCCAAGA
CTGCAAGAGAACTAGTACACCGGATGCAGAAGATTGATAGTGACTATTATCCTGAGACAC
TCCACCAAATGTTTGTTGTGAACGCTGGTAGTGGATTCAAGTGGATCTGGAACAGCGTGA
AGGGCTTCCTTGACCCTAAAACTTCATCCAAGATTCATGTGCTCGGTTCGAACTACCAGA
GCAGGCTTCTTGAAGTAATAGATTCGAGTGAGTTGCCAGAATTCCTTGGTGGTTCATGCA
CATGTAGTGACAAGGGTGGTTGTCTTGGATCGAACAAAGGGCCGTGGAATGATCCTTATA
TATTGAAGCTGATACACAGTTTGGAGGCTGGATGCGCGAGGGAAATCAAGCCTGTGTCTG
AGGGGGAGGAAAGAAGCAGCTCTTCTCTTCGGTTGGAGCAGTTGAAATGGCAGGGCATGT
TAAGTGACACTTCAAATGCTGAATCAGGATCTGATGTTGATGATTTTGGTCCATATGTTC
AGAAAGTTTCGGACTACGGTTGCTTGACTCCAGTCCATGAGGAAGTAAAGGGCACAGATT
GTGCAACATACTTAAGCTGTGATGATCAAAGTCACCCGGATATGGCTCCTGAATCTTACC
ATGGAGTGCGACGAACTACTGAAATGGTGCAGAAACCAATGGCTGATTTCAGGCAATATT
CCACCAACAGAAGGCCTCGTGATTTAGGGAACAATGCTCTGAATGTCAACGACACAGTTG
TTGAAAGGGGCTGGGAAAATGTAGTGAAGCTAGTAGTTACAGCGTTGATCAAGCTCTTTT
CCTTCATCCGGCTTTTCATCTCTAGAGCTGAGGGGAGGCTTGAGAACGTCAATGGCCCTG
CTCGACCAGCAACACCAGCAGCAGAGAAGCCAAAGCCTCGAGTCGTCAGTGATGAAGAGG
TGTGCGCCTGTTTACAGCGTATCGACAATCTCGAATTGCTGTGCAATCACCTTGCCACCA
AACCACCACAGATCCCAGAGGACAAGGAACGCATTCTGTTGAACTCATTTGAGCGGATCA
GATCCGTTGAGGCTGACCTTGAGAGGACCAGAAGACTGTTGAATGCGACCGTGGCCAAGC
AGAAGGCATTGGTGGAGACTCTGGAATCTGTACAGGAGTCGTCTAGAGTCAAGAAGCGGA
TGTTCTGTTCATAGGACATGGAGCTGAACCTCAAAACCATGTCGTTGAGATTAACCAACC
AACCAACCGTGAAGCGTGACGCCTCAAGCTGCCACCAGCCAGAGCCATTTTTGACCTTGC
CGCCACCACCGCGGAAAATGGAAGAGAAGACCGCATCATCCCTGTTGCTTCCTTCCATTC
TCCCCGTTTTTGTTCCTCCATTTGGTTGTACTCTACCGGCCGGCGCCCCTGTCTGTTGCC
TTTTTGATTGGTGAACGCTGCACCGGCTGGCCGGCTGCCGAGCGCCATGCCAAGTGTTGT
TTTTTCTTTCTTTCTTGGCCGAGACCTCCATTTTGGGGCAGAAACGCCTGAGAGATGGTG
CGAGTTGGTGTCCGAATGGTTGGAGTCGTTCTGTACTGAGTAGTAGTGAGTACTGACCCC
GTGGCTAGAGCTGGGAGGAACACAGTGGCGAGCTTGGTGTTCTGTACATGCCACCAACTG
TGATTCTGGTGGTCTGCTAATACAGATTGTTATCACAGTGCTTGT