Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU80931
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:63959386:63963021:-1 gene:SORBI_3007G210700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACGGACCATCTTGCTATTATCGCGTCCGAGCTAGGGGACGCAACGGATTTTGAGGTT
GATGGCATTGACAACCTCAGCGAGAATGATGTCAGTGATGAGGAGATTGATGCTGATGAG
CTTGCCCGGCGAATGTGGAAAGACAAGGTCAAGCTCAAGAGGATCAGGGAGAGGCAGCAG
AAGCTCGCTTTGCAGCGGTTGGAGCTGGAGAAGTCCAAGACAAAGAAGATTTCAGATCAA
GCTCTCCGGAAGAAGATGACGAGGGCTCAGGATGGGATCTTGAAGTACATGCTCAAGCTG
ATGGAAGTGTGCAATGCGCGGGGGTTCGTGTACGGCATCATTCCTGAGAAAGGGAAGCCT
GTCAGTGGTGCATCGGATAACATCAGGGAATGGTGGAAGGAGAAGGTGAAGTTTGATAAG
AATGGGCCAGCGGCGATTGTAAAATATGAGGTTGAGCACTCGATGCTGAGTAATCCTAAG
AGCAGTGGAGCCATGAACCAGCATAGCTTGATGGATCTCCAAGACGGCACTCTGGGTTCA
TTGCTTTCAGCGTTGATGCAACACTGCAGCCCACAGCAGCGAAGCTATCCATTGGATAAG
GGTGTCCCGCCCCCTTGGTGGCCATCAGGGAATGAGCCATGGTGGCCTGCGTTGGGCCTT
CCAAAGGGAGAAGCGCCTCCGTACAGGAAACCACATGATCTGAAGAAGGTTTGGAAAGTT
GGTGTTCTGACGGGTGTGATCAAGCACATGGCCCCAAACTTTGATAAGATCAGAAATCGT
GTAAGGAAATCAAAGTGTCTGCAGGACAAAATGACTGCAAAAGAGAGCCTCATTTGGCTT
GGTGTTTTGCAACGCGAGGAGAAGTCTATTCACAGTTTTGGCAGTGCTTTACTACCGATT
ACCCAGCATAGTACTTCAGAGGACAGAACTGAGGGCATATATAGCAGCAGTGATGAGTAT
GATGTCGACCGCCTGGAGCAGCCTCCTCGTTCTACATCATCCAAAGATGATGAGGGAGAT
GCTCAGCCTGTTTTGCAGATTAGAGGGGAGCAGATCTCAACTAGAGTGCCTAAGAGAAAG
CGTCATGATAAACCCTCCAACCAACTAGCTATTAGCAAGGAAGAAACGACAAAACCTAAA
CCTCGACAGCGGAATCGCCCCTCAGCTCGTTCTCCAGTTGCTGAGGTTGAGGTTGAAGTG
ACACAAAGAAATGACAATCCGCCAGATGTATCGTGCAATGCAGCTGATGGTATGAACCTT
ATTGATCCAATTGATGTGGTGGGCATGACTAACCAGCCAACGAGCTCTAGCCATGCCCCC
CCTACAATTGGAGCTTTGCAGCAGCACGGAGATTGTCAAGGGAATTTTCTATCTCCTGGT
GCTGTGATCAACAACTACAACAGCAACCAGGCTGCAAGTGCTGCTCAATCAAGCACTTAT
CTGGGCGACCATCCCCTGGCTTGTGAAGGCAGCGATATTGCCAATTCATGGTCTGGACAC
TCGTTTCGGCAGGATATTGGTATTGGGCCTATTGGTTTTAATCCTTCACAAGCTGTTCAT
CAGGATTTGGCAATGCAGCAGCCACTACCACTGCCTATGGATCACCAAGCGCCTATCATT
GGAACAGGAGCTCTCGCCACGAATGACTCTTACAGTCTCCCGACGGCAGGCAGTGGGAAT
TCTGGGACAATAGTTGGTGAGACCCACCAGCAGTTCATGGACGACCCTTTCTTCGGCGAG
GCTGGAGACAGCACTTTTGGTGGCCTTCCTTTCAGCCTCGTTCCTTTCAGTAGTCCGATG
CTCAACTTTGATGACTTGGTGGACGACGATGACTTGATGCCGTACCTGGGCACATGA

Peptide Sequence

PEP ID

OQU80931
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:63959386:63963021:-1 gene:SORBI_3007G210700 transcript:OQU80931 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTDHLAIIASELGDATDFEVDGIDNLSENDVSDEEIDADELARRMWKDKVKLKRIRERQQ
KLALQRLELEKSKTKKISDQALRKKMTRAQDGILKYMLKLMEVCNARGFVYGIIPEKGKP
VSGASDNIREWWKEKVKFDKNGPAAIVKYEVEHSMLSNPKSSGAMNQHSLMDLQDGTLGS
LLSALMQHCSPQQRSYPLDKGVPPPWWPSGNEPWWPALGLPKGEAPPYRKPHDLKKVWKV
GVLTGVIKHMAPNFDKIRNRVRKSKCLQDKMTAKESLIWLGVLQREEKSIHSFGSALLPI
TQHSTSEDRTEGIYSSSDEYDVDRLEQPPRSTSSKDDEGDAQPVLQIRGEQISTRVPKRK
RHDKPSNQLAISKEETTKPKPRQRNRPSARSPVAEVEVEVTQRNDNPPDVSCNAADGMNL
IDPIDVVGMTNQPTSSSHAPPTIGALQQHGDCQGNFLSPGAVINNYNSNQAASAAQSSTY
LGDHPLACEGSDIANSWSGHSFRQDIGIGPIGFNPSQAVHQDLAMQQPLPLPMDHQAPII
GTGALATNDSYSLPTAGSGNSGTIVGETHQQFMDDPFFGEAGDSTFGGLPFSLVPFSSPM
LNFDDLVDDDDLMPYLGT

Transcript Sequence

Transcript ID

OQU80931
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:63959386:63963021:-1 gene:SORBI_3007G210700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCGCGCTCCCTCGTGCGTGTTGTTCCCACCGCCGCCGCTATCCCCTGCTCCTTCCAATTT
TCCTCCCAAATAAAAACCAGCCGCAGCGGAGCCGGCGAGACGCGAACCCGGCCGCGAAAT
TCTCCTCGCGGATTCCGCCCCCTGCCGCCGCCGCGTCCGTCCCCCTCGACAAGGTACGAA
TCGACCGACGGCTTCGTTGGAGCAGCTCCTGTTGTCGGCTGCGATTGATTCTCGTGGAGT
GCTTTGGCGGTTTCGACCGGTGGTGATTGGTAAATCGTGCCTGTCCTCCTCTCTATGCGT
CGGCTAGGGTTCGTTCGGGATTCGGATTGCTCTGTCGACCGAGGTACTCCAGGGATCATC
GAGTGGTTGGGGATGGTTGGTGGCTGGTGCGGTCGTTGGATTGGTTTTTGGGTTCAAGTT
CCTTTTGTTTCGGCCAATGGTCGTGTTTTGTAGAACAATATCGATTTATTTTTTTTTCTA
GCTGTCATGCATGTAGTTTTGGCTCGAGCAGTGCTATGGATGTCTTTGGACTGCGAGTCT
GCGAGGCTTGCTCCGAGTCCCCATTGGACTGACTGAATCGGATTAGTTAATTTTTCATTT
TTGCCTACTGTGTGTGTAGTGATCGATCATTGCAGTGTGCTAAAATGTTCTGATTGCCAG
AAAACATATTGCTGTTTGGTTTCATTCGTAAGATTATTCCTTAGTGACTTGCATTGTAGT
ATATATTTTTTCTTTAAAAGGTTCTGACCACATGCATATACTGTGCAGCAGGTTGCTGCG
ATCGATTCCTCATTCGAATAGTTGATGAGCGAGAATACAAAGCAACTGAGCGCTGGAAGT
TTGATGGTGTGATGCAACTTGGTTAAGGAAGCTGACTGCTTGAAGTGATCATGACGGACC
ATCTTGCTATTATCGCGTCCGAGCTAGGGGACGCAACGGATTTTGAGGTTGATGGCATTG
ACAACCTCAGCGAGAATGATGTCAGTGATGAGGAGATTGATGCTGATGAGCTTGCCCGGC
GAATGTGGAAAGACAAGGTCAAGCTCAAGAGGATCAGGGAGAGGCAGCAGAAGCTCGCTT
TGCAGCGGTTGGAGCTGGAGAAGTCCAAGACAAAGAAGATTTCAGATCAAGCTCTCCGGA
AGAAGATGACGAGGGCTCAGGATGGGATCTTGAAGTACATGCTCAAGCTGATGGAAGTGT
GCAATGCGCGGGGGTTCGTGTACGGCATCATTCCTGAGAAAGGGAAGCCTGTCAGTGGTG
CATCGGATAACATCAGGGAATGGTGGAAGGAGAAGGTGAAGTTTGATAAGAATGGGCCAG
CGGCGATTGTAAAATATGAGGTTGAGCACTCGATGCTGAGTAATCCTAAGAGCAGTGGAG
CCATGAACCAGCATAGCTTGATGGATCTCCAAGACGGCACTCTGGGTTCATTGCTTTCAG
CGTTGATGCAACACTGCAGCCCACAGCAGCGAAGCTATCCATTGGATAAGGGTGTCCCGC
CCCCTTGGTGGCCATCAGGGAATGAGCCATGGTGGCCTGCGTTGGGCCTTCCAAAGGGAG
AAGCGCCTCCGTACAGGAAACCACATGATCTGAAGAAGGTTTGGAAAGTTGGTGTTCTGA
CGGGTGTGATCAAGCACATGGCCCCAAACTTTGATAAGATCAGAAATCGTGTAAGGAAAT
CAAAGTGTCTGCAGGACAAAATGACTGCAAAAGAGAGCCTCATTTGGCTTGGTGTTTTGC
AACGCGAGGAGAAGTCTATTCACAGTTTTGGCAGTGCTTTACTACCGATTACCCAGCATA
GTACTTCAGAGGACAGAACTGAGGGCATATATAGCAGCAGTGATGAGTATGATGTCGACC
GCCTGGAGCAGCCTCCTCGTTCTACATCATCCAAAGATGATGAGGGAGATGCTCAGCCTG
TTTTGCAGATTAGAGGGGAGCAGATCTCAACTAGAGTGCCTAAGAGAAAGCGTCATGATA
AACCCTCCAACCAACTAGCTATTAGCAAGGAAGAAACGACAAAACCTAAACCTCGACAGC
GGAATCGCCCCTCAGCTCGTTCTCCAGTTGCTGAGGTTGAGGTTGAAGTGACACAAAGAA
ATGACAATCCGCCAGATGTATCGTGCAATGCAGCTGATGGTATGAACCTTATTGATCCAA
TTGATGTGGTGGGCATGACTAACCAGCCAACGAGCTCTAGCCATGCCCCCCCTACAATTG
GAGCTTTGCAGCAGCACGGAGATTGTCAAGGGAATTTTCTATCTCCTGGTGCTGTGATCA
ACAACTACAACAGCAACCAGGCTGCAAGTGCTGCTCAATCAAGCACTTATCTGGGCGACC
ATCCCCTGGCTTGTGAAGGCAGCGATATTGCCAATTCATGGTCTGGACACTCGTTTCGGC
AGGATATTGGTATTGGGCCTATTGGTTTTAATCCTTCACAAGCTGTTCATCAGGATTTGG
CAATGCAGCAGCCACTACCACTGCCTATGGATCACCAAGCGCCTATCATTGGAACAGGAG
CTCTCGCCACGAATGACTCTTACAGTCTCCCGACGGCAGGCAGTGGGAATTCTGGGACAA
TAGTTGGTGAGACCCACCAGCAGTTCATGGACGACCCTTTCTTCGGCGAGGCTGGAGACA
GCACTTTTGGTGGCCTTCCTTTCAGCCTCGTTCCTTTCAGTAGTCCGATGCTCAACTTTG
ATGACTTGGTGGACGACGATGACTTGATGCCGTACCTGGGCACATGACACAGGTAGTTTG
TCTTTCAATTGCCACTTCTTTGGTTACCTACAACCTCTCTTATATGAATTTGGCAAGTAA
AATGGTAGCATTTTCTTTTGCTTCGTGACATATACCTGTGTCTGAAATTACTTACCTGGC
CGGTTCTTATGTTTGCAGTGTCCAATTCATACCTGGTAACTATGGCGTGGATAGGTGGTT
CATGCTCGTGCAGCCAGTTACTGGGAGAGTTGGGTGACATGCTGATGGAGCAGTGGAATG
TTGATGCAGCTGCAGCTCGTGACCCATTTGTGGCGCCGTCCTGAGAAGGTCATTGCTTTG
TAATATAACATCAATAATGTAGTTTAGGGTGCTCTCTTGACTGTACTGGATGTCAAATGC
TATACTGTCGTAAGCCGTGAACTTGTAGCCTGTAGAGCAAGTTAGGATTTGGTGGCATCA
TGCTGCTGGCGGAGAATTTCCGCAGCCGTTTAAAGGATTTTATTTTATTTATTTATTGCC
GTGTACAGTTTTTTGGGGATTTGCAGTAGCTTTTTGTCCTGCTCGTCTTTGTTTTTCTGC
GTGGGGCATGCATTTGTAATCTTGCGGGAATGGCAGGGGTGAGCAGAGGCCATGGCAGAC
GCCTGCACTTGGGGCGAAATGCCAAGGCTCCTGGGGCTGATCGGAGGTAGCACTAGTACC
CTTCCTCTGTAATCTTCCATAACCCTTTATTCCCCTGTAACGGCAGGCGAGCTCCTATCC
GAGTTGTTGCCGGCGCTGGCTAAACTGCTCCAGGGTTGTAACCGCTTCCCTCTTTGTTTT
GCCACACTTGGGTTGGCAAGTTATCAAACTTCCTTGTTCTAGCAAAATGTTCAGGGTAAA
ATCTTCTCTTTTAGGATCCTTTGGAATGTGAGGAAA