Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU80867
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:63125622:63128165:-1 gene:SORBI_3007G200200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTCCTTCCAATCTCCTCTTCCTGTTGCTGCTGCTTGCAACTGCAACTCCGTTGATC
ACCGGGCAGCTCTCCGACTACCCGACCGCCAACCTCTCAACACTGTGGACCAACAACAAC
GCCTCCCTCAAGCACAGCATCACCTACGCTGATGGCTCCATCGTACGGGCCATTGTTCTC
CGGTCACCAAAGGCTGCCTTCTATGGTCCTTCTTTCGCCGCAGGGTTCTTCTGCCCCTCC
GCACCCTGTGACACTGGTGATTTCCTGTTCGCTGTCTTCATCGTCTACACCAACAGCGGT
GCCGGCATCACCTCTGTAGTCAACGGAATTCCACAGGTAGTTTGGTCCGCTAACCGGGTC
CACCCTGTTAAGGAGAATGCCACCCTCGAGCTTACTGGGGATGGCAACCTGATCCTCCGT
GATGCTGATGGCGCTAGCGTCTGGTCGAGTGGCACTGCAGGCAGGTCCATTGCTGGCATG
ATGATCACAGAGCTGGGCAACCTGGTGCTGTTTGATCAGAAGAATGCAACAGTATGGCAG
TCGTTTGAACATCCGACAGATGCACTTGTCCCTGGGCAGTCACTACTGGAAGGCATGAGG
CTCACTGCAAATACATCTACGACAAACTGGACACAGAATCAGCTGTATATAACTGTCCTC
CATGATGGATTGTATGCCTATGTTGATTCCACACCACCACAGCCCTACTTCTCGAGATTG
GTGACCAAAAACTTGGTGACCAAAAACAAGACAGGAAACCAGCCAACACTGTTTACCTTA
ACGAATGGCAGCTTCAGTATCTTTGTGCAATCCACGCCAGATCCATATTCAAGCATCCCC
TTGCCAGAAGCAAAGTCTACCCAATATATGAGATTTGAGAGTGACGGACACCTCAGGTTG
TACGAATGGTCTAACACTGAAGCAAAGTGGGTCATGGTGTCCAATGTGATCAAGATGTAT
CCTGATGATGACTGTGCTTTCCCGACAGTCTGTGGGGAGTATGGGGTATGCACAGGAGGG
CAATGCAGCTGCCCCTTCCAGAGTAACTCTACTTCAAGCTACTTCAAGCTAATCGATGGG
AAGAAGCCGAATATTGGTTGCATGCCTCTGACTCCAATCTCCTGTCAAGAAATTCAACAC
CATGAGCTCTTGACCCTAAAAGATGTTTCATACTTTGATATAAATACAAGCCACACCATT
GCAAATGCTAGAAACAGCGATGACTGTAAGAAAGCATGCCTGAAAAACTGTTCCTGCCAG
GCCGTGATGTTCACATATGGACAGAATGAGTCCAATGGTGACTGCCTGTGGGTCACGAGG
GTTTTCTCCTTGCAATCAGTACAACCTCAGATTCTTCATTACAACTCCTCTGCTTACCTC
AAGGTGCAGCTTAGCCCCTCCCCTTCTGCAACTACTGCAAATAAAAAGAAGGCAATTTTA
GGCGCTATAATTGGAGGTGTTACTGGTGTTGTACTGGTTCTCATTGTTGTCACTCTTTAT
GTACAAAAGAGGAGGAAGTACCATGAGATAGACGAAGAATTTGATTTTGATCAATTGCCG
GGCAAACCAATGAGGTTTTCTTACGCAAAGTTGAGAGAATGCACCGAAGACTTCAGTCAA
AAGCTCGGGGAGGGTGGATTTGGTTCAGTTTTTGAAGGGAAATTAAATGAAGAGAGAATT
GCCGTGAAACGTTTGGAGAGCGCTAGACAAGGGAAGAAAGAATTCCTGGCAGAGGTTGAA
ACGATTGGTAGCATTGAGCACATCAATCTTGTCAGGCTGGTAGGATTCTGTGTAGAGAAA
GCACATAGACTTCTAGTATATGAATATATGCCTAGAGGTTCCCTCGATCGGTGGATATAT
TATCGCCACAATAATGCCCCTCTTGATTGGAGCACCAGGTGTAGGATCATTATGGATATT
GCCAAGGGCTTATGTTATCTTCATGAGGAGTGCCGGCGAAAAATTGCTCATTTGGACATT
AAACCACAGAATATTCTGTTAGATGACAACTTCAATGCTAAATTGGCTGATTTTGGATTA
TCGAAGCTCATAGACAGGGATCAAAGCAAAGTAGTGACTGTGATGAGAGGCACACCTGGG
TATCTGGCGCCTGAATGGTTAACGTCGCAAATCACCGAAAAAGTTGATATTTACAGCTTT
GGAGTTGTTGTTATGGAAGTAATATGTGGAAGAAAAAATATCGATAATTCTCAGCCTGAG
GAAAGCATCCATCTGATCACATTGTTACAAGAAAAGGCTCAAAACAACAGGCTGATTGAT
ATGATTGACAAACAAAGTCATGACATGGTCACACACCAGGATAAAGTTATTCAAATGATG
AAGCTTGCAATGTGGTGCTTGCAACATGATAGCAGTCGAAGGCCGTTGATGTCAATGGTA
GTCAAGGTACTTGAAGGTACAATGACCGTAGAAACTTCCATAGATTACAATTTCTTCAGT
TCAGATCCAGTATTGTCTGTTCAAACTGATCAATCAGCATATTCAGCTCCACCACTGGCA
TCAATCTTATCTGGTCCAAGATGA

Peptide Sequence

PEP ID

OQU80867
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:63125622:63128165:-1 gene:SORBI_3007G200200 transcript:OQU80867 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAPSNLLFLLLLLATATPLITGQLSDYPTANLSTLWTNNNASLKHSITYADGSIVRAIVL
RSPKAAFYGPSFAAGFFCPSAPCDTGDFLFAVFIVYTNSGAGITSVVNGIPQVVWSANRV
HPVKENATLELTGDGNLILRDADGASVWSSGTAGRSIAGMMITELGNLVLFDQKNATVWQ
SFEHPTDALVPGQSLLEGMRLTANTSTTNWTQNQLYITVLHDGLYAYVDSTPPQPYFSRL
VTKNLVTKNKTGNQPTLFTLTNGSFSIFVQSTPDPYSSIPLPEAKSTQYMRFESDGHLRL
YEWSNTEAKWVMVSNVIKMYPDDDCAFPTVCGEYGVCTGGQCSCPFQSNSTSSYFKLIDG
KKPNIGCMPLTPISCQEIQHHELLTLKDVSYFDINTSHTIANARNSDDCKKACLKNCSCQ
AVMFTYGQNESNGDCLWVTRVFSLQSVQPQILHYNSSAYLKVQLSPSPSATTANKKKAIL
GAIIGGVTGVVLVLIVVTLYVQKRRKYHEIDEEFDFDQLPGKPMRFSYAKLRECTEDFSQ
KLGEGGFGSVFEGKLNEERIAVKRLESARQGKKEFLAEVETIGSIEHINLVRLVGFCVEK
AHRLLVYEYMPRGSLDRWIYYRHNNAPLDWSTRCRIIMDIAKGLCYLHEECRRKIAHLDI
KPQNILLDDNFNAKLADFGLSKLIDRDQSKVVTVMRGTPGYLAPEWLTSQITEKVDIYSF
GVVVMEVICGRKNIDNSQPEESIHLITLLQEKAQNNRLIDMIDKQSHDMVTHQDKVIQMM
KLAMWCLQHDSSRRPLMSMVVKVLEGTMTVETSIDYNFFSSDPVLSVQTDQSAYSAPPLA
SILSGPR

Transcript Sequence

Transcript ID

OQU80867
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:63125622:63128165:-1 gene:SORBI_3007G200200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTCCTTCCAATCTCCTCTTCCTGTTGCTGCTGCTTGCAACTGCAACTCCGTTGATC
ACCGGGCAGCTCTCCGACTACCCGACCGCCAACCTCTCAACACTGTGGACCAACAACAAC
GCCTCCCTCAAGCACAGCATCACCTACGCTGATGGCTCCATCGTACGGGCCATTGTTCTC
CGGTCACCAAAGGCTGCCTTCTATGGTCCTTCTTTCGCCGCAGGGTTCTTCTGCCCCTCC
GCACCCTGTGACACTGGTGATTTCCTGTTCGCTGTCTTCATCGTCTACACCAACAGCGGT
GCCGGCATCACCTCTGTAGTCAACGGAATTCCACAGGTAGTTTGGTCCGCTAACCGGGTC
CACCCTGTTAAGGAGAATGCCACCCTCGAGCTTACTGGGGATGGCAACCTGATCCTCCGT
GATGCTGATGGCGCTAGCGTCTGGTCGAGTGGCACTGCAGGCAGGTCCATTGCTGGCATG
ATGATCACAGAGCTGGGCAACCTGGTGCTGTTTGATCAGAAGAATGCAACAGTATGGCAG
TCGTTTGAACATCCGACAGATGCACTTGTCCCTGGGCAGTCACTACTGGAAGGCATGAGG
CTCACTGCAAATACATCTACGACAAACTGGACACAGAATCAGCTGTATATAACTGTCCTC
CATGATGGATTGTATGCCTATGTTGATTCCACACCACCACAGCCCTACTTCTCGAGATTG
GTGACCAAAAACTTGGTGACCAAAAACAAGACAGGAAACCAGCCAACACTGTTTACCTTA
ACGAATGGCAGCTTCAGTATCTTTGTGCAATCCACGCCAGATCCATATTCAAGCATCCCC
TTGCCAGAAGCAAAGTCTACCCAATATATGAGATTTGAGAGTGACGGACACCTCAGGTTG
TACGAATGGTCTAACACTGAAGCAAAGTGGGTCATGGTGTCCAATGTGATCAAGATGTAT
CCTGATGATGACTGTGCTTTCCCGACAGTCTGTGGGGAGTATGGGGTATGCACAGGAGGG
CAATGCAGCTGCCCCTTCCAGAGTAACTCTACTTCAAGCTACTTCAAGCTAATCGATGGG
AAGAAGCCGAATATTGGTTGCATGCCTCTGACTCCAATCTCCTGTCAAGAAATTCAACAC
CATGAGCTCTTGACCCTAAAAGATGTTTCATACTTTGATATAAATACAAGCCACACCATT
GCAAATGCTAGAAACAGCGATGACTGTAAGAAAGCATGCCTGAAAAACTGTTCCTGCCAG
GCCGTGATGTTCACATATGGACAGAATGAGTCCAATGGTGACTGCCTGTGGGTCACGAGG
GTTTTCTCCTTGCAATCAGTACAACCTCAGATTCTTCATTACAACTCCTCTGCTTACCTC
AAGGTGCAGCTTAGCCCCTCCCCTTCTGCAACTACTGCAAATAAAAAGAAGGCAATTTTA
GGCGCTATAATTGGAGGTGTTACTGGTGTTGTACTGGTTCTCATTGTTGTCACTCTTTAT
GTACAAAAGAGGAGGAAGTACCATGAGATAGACGAAGAATTTGATTTTGATCAATTGCCG
GGCAAACCAATGAGGTTTTCTTACGCAAAGTTGAGAGAATGCACCGAAGACTTCAGTCAA
AAGCTCGGGGAGGGTGGATTTGGTTCAGTTTTTGAAGGGAAATTAAATGAAGAGAGAATT
GCCGTGAAACGTTTGGAGAGCGCTAGACAAGGGAAGAAAGAATTCCTGGCAGAGGTTGAA
ACGATTGGTAGCATTGAGCACATCAATCTTGTCAGGCTGGTAGGATTCTGTGTAGAGAAA
GCACATAGACTTCTAGTATATGAATATATGCCTAGAGGTTCCCTCGATCGGTGGATATAT
TATCGCCACAATAATGCCCCTCTTGATTGGAGCACCAGGTGTAGGATCATTATGGATATT
GCCAAGGGCTTATGTTATCTTCATGAGGAGTGCCGGCGAAAAATTGCTCATTTGGACATT
AAACCACAGAATATTCTGTTAGATGACAACTTCAATGCTAAATTGGCTGATTTTGGATTA
TCGAAGCTCATAGACAGGGATCAAAGCAAAGTAGTGACTGTGATGAGAGGCACACCTGGG
TATCTGGCGCCTGAATGGTTAACGTCGCAAATCACCGAAAAAGTTGATATTTACAGCTTT
GGAGTTGTTGTTATGGAAGTAATATGTGGAAGAAAAAATATCGATAATTCTCAGCCTGAG
GAAAGCATCCATCTGATCACATTGTTACAAGAAAAGGCTCAAAACAACAGGCTGATTGAT
ATGATTGACAAACAAAGTCATGACATGGTCACACACCAGGATAAAGTTATTCAAATGATG
AAGCTTGCAATGTGGTGCTTGCAACATGATAGCAGTCGAAGGCCGTTGATGTCAATGGTA
GTCAAGGTACTTGAAGGTACAATGACCGTAGAAACTTCCATAGATTACAATTTCTTCAGT
TCAGATCCAGTATTGTCTGTTCAAACTGATCAATCAGCATATTCAGCTCCACCACTGGCA
TCAATCTTATCTGGTCCAAGATGA