Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU80803
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:62116383:62118704:-1 gene:SORBI_3007G188200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGCCGCAGCTCGGCGCGTCGGCCGCGAAGAAGCGGCGGGTCACTGAGGAAGCAGCG
GCGGTGGCGGCCGATGAGGGGGACCCCATCCTGGCGCTGCCGGAGGACCTGCAGCTGCGC
ATTCTGTCCCTGCTCCCGCTCAAGTCCGCCATCCGCACGGGCGCGCTCTCCACGCGGTGG
CGCGGGCTCTGGGCGCGCCGCTGGCCCGCGCCGTCCTCGCTCGACCTCCACCTCCGCTCC
GGGGTCGACGACCCGGACCGGCTCCTCGGCTCGCTCCACTGCCGCGGGCACCGCCACCTC
GACCGCTTCTCCCTCACCTTCCACTTCGGCGAGTACCGCCGCCGCCGCCTCCCCCACCGC
TACTTCCGCGACGAGGACATCAGCCGCTGCCTCGAATACGCCGCTGCCTGCGACGCCGAG
GACCTCAACCTCGACATCGCCGACCACTTCATGAGCACGGGCTCCATGCTCCGCTTCCCG
CCGGCCTGCCCCCGCCTCGCGCGCCTCTCCCTCCTCCACGTCGGCTACGTCACGTTCGAT
TACTCCCTCCGCTCCGACGCGTACGCCGCCCTCGAGGTCGTCCAGATCCACTCCGCCCGC
TCGGTGGACATCAACCAGCTTCTCCCGGCGTGCCCTCGCCTCCGCACCCTCGACCTGCGC
GCCTGCAAGTTCCTCGATGAAATCTACGCCACGTCGCCGCAGGGGCGCCTCAGGAGCCTC
ACCGTCGCCGAGTGCAACCGCGTCACCCACCTCTACGCCGGCTTGGCCTCCGGCCTCCGC
TCCTTCCGCCTCAGCAGTGCCCTTCTCCCCATCTACGAGATCGCGGCCACCGCGCAGCTT
GACGACCTTTACATCTGCCTACGGGGGCCATGCAGAATTTATGCGTTGGCTCGTTTCGGA
TCAGCTACTTGTTTGACTAGGCTGAGGAAATTGCCGAGCTTGAAAGAGCTGCAGCTGCTG
ATGTTTGAAATGAAAAGCTCCAATCTCGCTCATATCTATATGTTCCTCCAGACCTGCCGG
TGTCCAAAGCTGGAGAGGCTCTTTGTGCAGCTCCCATCAAGCAGTAGTGATACTTTTGTA
GGGAATTCCTTGGAGGTGGCAGAGGAGGATGATTCAGAGGGAAGGCATTCCGAGGAAGAT
GTTACAGAGGATGATGAACCGGACAAAGAGCTTTCGGAGGAAGAAGATACAGAGAGTGAT
GAACCAGAGGAAGAGCTTTCGGAGGAAGATGTGACAGAGGATGAGTTATTGCAGGAAGAA
CTGGTACAAGAATATATGCTGAAGGAAAGACCCTACTATGAGGATGTGTATGAGGAAGAT
ATTCTGGGAGAAGATGTGCCAGAGGAAGATTATTTTGAGGAAGATGAACCAGAGTATGAC
TTTGGTAACCTTATGTTTGTAAGGATGATGAAATTCAAGGGCCACTACTTTGAGTTGCGT
CTAGTAAGTTTTTTGTTGAGGAAGGCCACTGGTCTAAAGAAACTGCTATTGGTTGCTCCT
AAGGGGAATCTCATGGACAGGGTTGGAAATGATCATGTGGATCTATCCCCTTTTGTGGAG
ACAAAACAACTGCCTTTCAGAAGAGCTTCACCCAATGTTCAGATAATTCTGAGCAAATGT
GATTCTGCTGGAATCCAGCCAGTGCATGCTGAGATTTTTTCCTATTTCTAG

Peptide Sequence

PEP ID

OQU80803
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:62116383:62118704:-1 gene:SORBI_3007G188200 transcript:OQU80803 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAPQLGASAAKKRRVTEEAAAVAADEGDPILALPEDLQLRILSLLPLKSAIRTGALSTRW
RGLWARRWPAPSSLDLHLRSGVDDPDRLLGSLHCRGHRHLDRFSLTFHFGEYRRRRLPHR
YFRDEDISRCLEYAAACDAEDLNLDIADHFMSTGSMLRFPPACPRLARLSLLHVGYVTFD
YSLRSDAYAALEVVQIHSARSVDINQLLPACPRLRTLDLRACKFLDEIYATSPQGRLRSL
TVAECNRVTHLYAGLASGLRSFRLSSALLPIYEIAATAQLDDLYICLRGPCRIYALARFG
SATCLTRLRKLPSLKELQLLMFEMKSSNLAHIYMFLQTCRCPKLERLFVQLPSSSSDTFV
GNSLEVAEEDDSEGRHSEEDVTEDDEPDKELSEEEDTESDEPEEELSEEDVTEDELLQEE
LVQEYMLKERPYYEDVYEEDILGEDVPEEDYFEEDEPEYDFGNLMFVRMMKFKGHYFELR
LVSFLLRKATGLKKLLLVAPKGNLMDRVGNDHVDLSPFVETKQLPFRRASPNVQIILSKC
DSAGIQPVHAEIFSYF

Transcript Sequence

Transcript ID

OQU80803
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:62116383:62118704:-1 gene:SORBI_3007G188200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCGTGAGCGAGGAGTGGGAGCCTGGGAGGGCCGGTGAGCGGCGGCGCGGGAGGAATCCGG
CGGCGAGTAGCTCCGCGATGGCGCCGCAGCTCGGCGCGTCGGCCGCGAAGAAGCGGCGGG
TCACTGAGGAAGCAGCGGCGGTGGCGGCCGATGAGGGGGACCCCATCCTGGCGCTGCCGG
AGGACCTGCAGCTGCGCATTCTGTCCCTGCTCCCGCTCAAGTCCGCCATCCGCACGGGCG
CGCTCTCCACGCGGTGGCGCGGGCTCTGGGCGCGCCGCTGGCCCGCGCCGTCCTCGCTCG
ACCTCCACCTCCGCTCCGGGGTCGACGACCCGGACCGGCTCCTCGGCTCGCTCCACTGCC
GCGGGCACCGCCACCTCGACCGCTTCTCCCTCACCTTCCACTTCGGCGAGTACCGCCGCC
GCCGCCTCCCCCACCGCTACTTCCGCGACGAGGACATCAGCCGCTGCCTCGAATACGCCG
CTGCCTGCGACGCCGAGGACCTCAACCTCGACATCGCCGACCACTTCATGAGCACGGGCT
CCATGCTCCGCTTCCCGCCGGCCTGCCCCCGCCTCGCGCGCCTCTCCCTCCTCCACGTCG
GCTACGTCACGTTCGATTACTCCCTCCGCTCCGACGCGTACGCCGCCCTCGAGGTCGTCC
AGATCCACTCCGCCCGCTCGGTGGACATCAACCAGCTTCTCCCGGCGTGCCCTCGCCTCC
GCACCCTCGACCTGCGCGCCTGCAAGTTCCTCGATGAAATCTACGCCACGTCGCCGCAGG
GGCGCCTCAGGAGCCTCACCGTCGCCGAGTGCAACCGCGTCACCCACCTCTACGCCGGCT
TGGCCTCCGGCCTCCGCTCCTTCCGCCTCAGCAGTGCCCTTCTCCCCATCTACGAGATCG
CGGCCACCGCGCAGCTTGACGACCTTTACATCTGCCTACGGGGGCCATGCAGAATTTATG
CGTTGGCTCGTTTCGGATCAGCTACTTGTTTGACTAGGCTGAGGAAATTGCCGAGCTTGA
AAGAGCTGCAGCTGCTGATGTTTGAAATGAAAAGCTCCAATCTCGCTCATATCTATATGT
TCCTCCAGACCTGCCGGTGTCCAAAGCTGGAGAGGCTCTTTGTGCAGCTCCCATCAAGCA
GTAGTGATACTTTTGTAGGGAATTCCTTGGAGGTGGCAGAGGAGGATGATTCAGAGGGAA
GGCATTCCGAGGAAGATGTTACAGAGGATGATGAACCGGACAAAGAGCTTTCGGAGGAAG
AAGATACAGAGAGTGATGAACCAGAGGAAGAGCTTTCGGAGGAAGATGTGACAGAGGATG
AGTTATTGCAGGAAGAACTGGTACAAGAATATATGCTGAAGGAAAGACCCTACTATGAGG
ATGTGTATGAGGAAGATATTCTGGGAGAAGATGTGCCAGAGGAAGATTATTTTGAGGAAG
ATGAACCAGAGTATGACTTTGGTAACCTTATGTTTGTAAGGATGATGAAATTCAAGGGCC
ACTACTTTGAGTTGCGTCTAGTAAGTTTTTTGTTGAGGAAGGCCACTGGTCTAAAGAAAC
TGCTATTGGTTGCTCCTAAGGGGAATCTCATGGACAGGGTTGGAAATGATCATGTGGATC
TATCCCCTTTTGTGGAGACAAAACAACTGCCTTTCAGAAGAGCTTCACCCAATGTTCAGA
TAATTCTGAGCAAATGTGATTCTGCTGGAATCCAGCCAGTGCATGCTGAGATTTTTTCCT
ATTTCTAGTTTTCTCAGTTGAAGAATACGTTAATCTAGATAAATAGTAAGAACTTGCCAA
GTGGATATACTGAAGGTGTTTTCGGCTCTTTATCTATATGTTCCGTTTCCACCATTATTG
TATGAAATGTGGAACAGTAAAGCCACTAATATATGTATTGTACACAGTGGGCATGATGTT
TTGTGGTATAGATCACCTGGTTGTATGATTTAGGCATTTTGTGCTGCTCCCTGAGTTCTC
TCTCTACTCTTTTTTTTGTCTTTTGTTTAATCATGTTACCT