Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU80772
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:61570897:61576349:-1 gene:SORBI_3007G182500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGACGACCCGGGCGCCTCCGCCGACCCCGCCGGTGCCGCGCGCCACCACCTCTCGCCG
CAGCAGCAGCAGCAGCTCGGGGGGCAGCCGCCAGTGCCGCGCTCCCCGACGCCGCTCGAC
CTGGCCTCCTCCTCCGCAGCCGCCGCGGCGTCCGGGTACCGCCGCCTCTCGCCGTCGCTC
CGGCCGCCGGCGCACCCGCAGGCGGCGCGCCTCCCGTCGCCCTACGGCCAGATCCCTTCG
CCAGGCGGCGCCGGCGCCCACCACGCGCGCTCGCTCTCCCAGCCGCTCTTCTTCTCGCTC
GACTCGCTCCCGCTGCCGCCGCCGCTGCCGCCCTACGCCGATCTGGGCGCCGCGCCCCCC
GCGATACCGCCCTCCCCGCCGCCGTCGACCTCCTCCGACCCGCACCCGCCGCCGCCGCCG
CCGCTCGGCTTGCCGCCCAGGAGGGCAGGCCACCGCCGCTCGCAGAGCGACATCCCCTTC
GGCTTCGCGCAGCTCAGCCCGCCGCTGCCCCCGCCGGCTCCCGTCAAGCGCGAGGTCACC
ACTGCGGCCGACGGCTGCAGATCGGACGGCGGCGGCGGCGATGACGCCGCGCTCTATGAT
CTCGTCAACTCGTACATGGACCTGGACGGGCTGGACCCGCTCAACTCCTCCGAGGACCGC
CACGAAGACCGCGACAGCCGCGCCAGCGGCACGCGCGCCGGGAGCGCGGCCGAGAGCAGC
GAGAACGAGGCGGAGAGCCAGTCCACGTCGGTCGACAGGAAGGATGGGGGCAAGTCCCGG
CATTGTCGTAGCCTGTCTATGGATAGCTTCATGGGCAAGCTCAACTTCGCCGCAGGGGAT
GAGTCTCCTAAGCTGCCGCTGCCGTCTCCTGGTGGCAGCCTCACTAGGAGTGGGAGTGGC
TCAATGGAAGGTGGTGCTGTCGCTCTGTTTGATATGGAGTTTGCCAATGGGGAGTTTACT
GATTCTGAGAAGAAGAAGATCATGGCGAATGAGCGACTTGCTGAGATAGCTTTGACGGAT
CCTAAGAGGGTCAAGAGGATTCTGGCGAATCGGCAGTCAGCAGCAAGGTCAAAGGAGCGC
AAGATGAGGTACATTCAGGAGCTTGAGCATAAGGTGCAAGTGCTGCAGACAGAGGCTACC
ACACTCTCAGCACAGTTGACAATGCTGCAGAGGGACTCAGCTGGACTGGCTACTCAGAAC
AACGAGTTGAAAATCAGGCTGCAAGCAATGGAGCAACAAGCACAGCTGAGAGACGCCCTG
AATGAAGCGTTAACTGCCGAGGTCCAGCGTCTGAAACTCGCAACTGGGGAGATAACTGAT
GGACATGGACGGATGCCGAAGGGGCTACAGCAGCAGATGAACTCCCAGATGCTCCAGCTC
CAGCAACTGCAAATACAGCAGCAGGTGCCCCAGACACAGCAGCAGCAAGGCCAGCGACAG
CAGCAGCAGCAGCAGCAGCAGCCCCAGAAGTCGGCATAG

Peptide Sequence

PEP ID

OQU80772
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:61570897:61576349:-1 gene:SORBI_3007G182500 transcript:OQU80772 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDDPGASADPAGAARHHLSPQQQQQLGGQPPVPRSPTPLDLASSSAAAAASGYRRLSPSL
RPPAHPQAARLPSPYGQIPSPGGAGAHHARSLSQPLFFSLDSLPLPPPLPPYADLGAAPP
AIPPSPPPSTSSDPHPPPPPPLGLPPRRAGHRRSQSDIPFGFAQLSPPLPPPAPVKREVT
TAADGCRSDGGGGDDAALYDLVNSYMDLDGLDPLNSSEDRHEDRDSRASGTRAGSAAESS
ENEAESQSTSVDRKDGGKSRHCRSLSMDSFMGKLNFAAGDESPKLPLPSPGGSLTRSGSG
SMEGGAVALFDMEFANGEFTDSEKKKIMANERLAEIALTDPKRVKRILANRQSAARSKER
KMRYIQELEHKVQVLQTEATTLSAQLTMLQRDSAGLATQNNELKIRLQAMEQQAQLRDAL
NEALTAEVQRLKLATGEITDGHGRMPKGLQQQMNSQMLQLQQLQIQQQVPQTQQQQGQRQ
QQQQQQQPQKSA

Transcript Sequence

Transcript ID

OQU80772
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:61570897:61576349:-1 gene:SORBI_3007G182500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGCACACGCGAACCCACCGCCGATTAAATAAAGCCCCACAGAAAAAAGAAAATCAAATCA
GAAATTTTCAATTGCTTCCGCGAGAAAAAAAACATTTCCTCTTTTTTTCTTTATTTTGTG
TGTGTTTTGTTTCTAGTGATAGCTTTGCTCTTGCTCGCTCTCCTCGCCTGGGCGAGAGCG
AGACTCCGTGTGCGCCTCCATCCACTTCGCCATCTCCTCCAGCTGCAGGCCGGCGCCTCG
CGCTCGCCGCCAGCATTCCGGCAGTTCCTGCTCCGTGCCTTCAAGAGGGGGTAGCGGCGG
GATGGACGACCCGGGCGCCTCCGCCGACCCCGCCGGTGCCGCGCGCCACCACCTCTCGCC
GCAGCAGCAGCAGCAGCTCGGGGGGCAGCCGCCAGTGCCGCGCTCCCCGACGCCGCTCGA
CCTGGCCTCCTCCTCCGCAGCCGCCGCGGCGTCCGGGTACCGCCGCCTCTCGCCGTCGCT
CCGGCCGCCGGCGCACCCGCAGGCGGCGCGCCTCCCGTCGCCCTACGGCCAGATCCCTTC
GCCAGGCGGCGCCGGCGCCCACCACGCGCGCTCGCTCTCCCAGCCGCTCTTCTTCTCGCT
CGACTCGCTCCCGCTGCCGCCGCCGCTGCCGCCCTACGCCGATCTGGGCGCCGCGCCCCC
CGCGATACCGCCCTCCCCGCCGCCGTCGACCTCCTCCGACCCGCACCCGCCGCCGCCGCC
GCCGCTCGGCTTGCCGCCCAGGAGGGCAGGCCACCGCCGCTCGCAGAGCGACATCCCCTT
CGGCTTCGCGCAGCTCAGCCCGCCGCTGCCCCCGCCGGCTCCCGTCAAGCGCGAGGTCAC
CACTGCGGCCGACGGCTGCAGATCGGACGGCGGCGGCGGCGATGACGCCGCGCTCTATGA
TCTCGTCAACTCGTACATGGACCTGGACGGGCTGGACCCGCTCAACTCCTCCGAGGACCG
CCACGAAGACCGCGACAGCCGCGCCAGCGGCACGCGCGCCGGGAGCGCGGCCGAGAGCAG
CGAGAACGAGGCGGAGAGCCAGTCCACGTCGGTCGACAGGAAGGATGGGGGCAAGTCCCG
GCATTGTCGTAGCCTGTCTATGGATAGCTTCATGGGCAAGCTCAACTTCGCCGCAGGGGA
TGAGTCTCCTAAGCTGCCGCTGCCGTCTCCTGGTGGCAGCCTCACTAGGAGTGGGAGTGG
CTCAATGGAAGGTGGTGCTGTCGCTCTGTTTGATATGGAGTTTGCCAATGGGGAGTTTAC
TGATTCTGAGAAGAAGAAGATCATGGCGAATGAGCGACTTGCTGAGATAGCTTTGACGGA
TCCTAAGAGGGTCAAGAGGATTCTGGCGAATCGGCAGTCAGCAGCAAGGTCAAAGGAGCG
CAAGATGAGGTACATTCAGGAGCTTGAGCATAAGGTGCAAGTGCTGCAGACAGAGGCTAC
CACACTCTCAGCACAGTTGACAATGCTGCAGAGGGACTCAGCTGGACTGGCTACTCAGAA
CAACGAGTTGAAAATCAGGCTGCAAGCAATGGAGCAACAAGCACAGCTGAGAGACGCCCT
GAATGAAGCGTTAACTGCCGAGGTCCAGCGTCTGAAACTCGCAACTGGGGAGATAACTGA
TGGACATGGACGGATGCCGAAGGGGCTACAGCAGCAGATGAACTCCCAGATGCTCCAGCT
CCAGCAACTGCAAATACAGCAGCAGGTGCCCCAGACACAGCAGCAGCAAGGCCAGCGACA
GCAGCAGCAGCAGCAGCAGCAGCCCCAGAAGTCGGCATAGATCAGGTCTGAGAGAAGGAC
GAGGAAGCTAATTGAGCATATGGCCAATTGAAGGATGGTGGGGAAAGAAAACCCCAATCT
TTTGCGTATATCAGACAGGTTGTAGGATAGCAGCAATAGTAGGGCGAGAGCCGCCATGGT
CCCTTGAGTTGAGTTGTTTTCGCCCGATACCGCACCTTAGCTGGAGTCTGTCGTACCATA
CATGAATGCCTGCCTGCCTAGTGTTGAGGCGTCTGGGTAGCGTCCCTGAACGTGTTCTCT
CGGAGTTGGAGGTGTTTCTTCTTCTTCTTCTTCTGTACTTTTGTCTAAGAGGGCTAGGGT
GTCACAAATGTACCTGCGTAATAGTGTAATTATTATTATTATTTAGTGTCTGTGGAGTGG
ACTAGTATGGAAGTGAAAAGCTTCCAACTTCACATGCATGTTCGTTGATCGTCAGTCAGT
GGCTGCTGCTGTTGGTTGCGGTGCCTGCTGACTGCTGTGGGTTGGTCACTGGAGCCTTGG
GGGGCCAGCACCAGCAAGCACATGGTGCCTGATTCTGCTGCGCATGCACTGTGAAGTGGT
CTTCTGCTGACTTTGATATGCTTGCAACTGGAGTGGTGTTTTGTGGAATCCTGGCGTGGC
ATGGACTGTGTCCAAGCTGCTAAAGTGCAGATCGTGAAGGGTTGGTGCCCACGCACGTCA
CTGTGCGGTGGAGTGTGAAGTGGACGGCATCAGATGATCTCCTTGCCGTCGTTGGAAGTA
TGAGAGTAAAAGTCTCGCTCGTCGTGGTGAACGCGAAGATTCTTGCGGTGCGGTGCCCCG
AGAAGGTGGGCGCTGCGGGCCGGGGCTTGCCGCTGTTCGTCGGGGCTGGGACAGGCGGGC
CGCAGGGGTGCAAGGCCGGAGGGATAGATCGGTCAGAGATCAGAGCGGGGCAATTCGGCA
CTTGGGCTGGGCCGCCTGTGTGATCGAGGGGCGTTGCTGCCTTGGAGCCTCACAGGTGTG
TTTGGTTGGGCTCCCAAGCTAGCTGAGTTGGTGTTTCTTCTAGAGCCAGATCAGAGCCAG
TCTCGATGCTCACTTTTTGTAACCACCCAGTTTCACTTTGTTCTTCAGTGTTGGTGCTTG
GCCTCCCACCGGTGCTCCTCCTCCTCCCCCCGCCGGTGCTCCTCCGCGTCGGTCATCCCT
CGCTGGAGCTCATCCCTAGCGGTACTCCTTCACGCCGGCGCGAGGAGGCGGTGGAGACAG
CAGCACACCTCATGTTACCAGTAGACATTGAAGACGTCGTGGTTGGTGGCGTAGACGACG
CGGGCGCAGCTGATGCGGGTAGACGACTATCGGAGGTTGGGAGTGGCTCAACGTGAAAGG
AATCGACCTGTATGATAAATTTTTGGTATATAATATTCCCTGTGCCAAGTAACACGGGCT
GCCAGCAGGGAGTGACCCGTGCAATATTTTT