Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU80715
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:60503029:60506362:-1 gene:SORBI_3007G170300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCGCCTGCAAACTCCCCACGCTTTGCACTGCCCCTACACCATACTTATATGCCTCT
CGCCGCTCCGCCGGCCAAACCATCATCAGCACGGCAGCGGCATCGGCATGTCATCGTTGC
CGCGCCAGTCGTCGTCGAATTCAAGCCGCTGGAGATTGCACAAAGCATTCTGCTTGGACC
AGCATCCGACACGAACGGTGGGAAGGTGACTTGGCCATAGAAGGACACATCCCTGCTTGG
CTGAACGGCACGTACCTAAGGAACGGGCCAGGTGTGTGGGAGGTAGGCGACCACGCGTTG
GATCACGTCTTCGACGGCTACGCCACACTGGTCCGTGTCTACTTCCAGGGCGCTCGTGGC
CGTGCTACCGGCGCGCACAGGCAGATCGAGTCCGACGCATACAAGGCCGCCGCCAGGGCG
CACGGCCGCCGCCGTCCGCTCATGCGCATGCGCGAGTTCTCCCAGCTGTGCCCTAGCGAG
CCGGGCACCCTCCTCGACCGCCTCCGGCACGTCGTCGGGCTCGTCACCGGCGCCGGCATG
TCCGACAACGCCAACACCGCGGTGCTCCCACTCGGGGATGGCCGGGTGGTGTGCCTCGCC
GACGTCACCAAGAGCTCGGTGCTCGTCGACCCGGAGACACTCGAGACGGTCGGCAAGCTC
CGGTACGCGGACAGGCTGTGGTGCCCGGTGCAGTGCACGCACCCGGTGGTGACGACGACG
ACGACGACGACGACCCGCGCCGCCGCCGCCGCCGAGGTCTTGATGCTGCACCCGGACTTT
GCCCGGCGGGGCTACCTCGTGGCCAGGATGATGGCAGCTGGTGGGACTGGGAGCAACGAC
AGGCGGGAGGTGGTCGGGAGGGTGCGGTGCCGGGGAGGCACGACGCCGGCGTGGGTGCAC
TCGTTCGCCGTCACGGCGAAGTACATCGTCGTGCCGGAGATGCCGCTCCGGTACTCGGTC
GCCTGCTTGCTCATGTCCGAGCTCACCCCGTTTTACATAATGGACTGGCTACCACACTCC
GGGAGCTACATGCACGTCATATGCAGATCCACTGGAAACACTGTGGCGAGCGTCGAGGTG
CCTCCTTTCGTGGCATTTCACTTCATCAACGCATACGAGGAGAATGGTGATGATGACGAC
GGTGTCCGGCCCAACGCCATCATCGCCGACTGCTGCGAGTACTACGCTGATCCTGCTATC
ATCCAGGCACTTGCTCTCCACAGGCTTAGATCGCCGGAGACGGCCAAGGACTTCCCTGAT
TCCAGAATACCCCTGGACGGCAGCGCCGCCATGGGCGAGCTGGAGACAGTGCTGGACCCT
GAAGAGCACGGCCGGGGTGTGGAGTTGAGCACCATCAACCCAGACTACGTCGGCAAGGAG
TACCGCTACTTGTACGCCTGCACCGCGCGCCGGCCATGCAATTTCTTCAACGCGCTCACC
AAGATGGACCTGGTGGAGAAGGAGACCACGAGCTGGCATGAGGAGGGCACGGTGCCATCG
GAGCCCTTCTTTGTGGCCAGGCCGGGAGCAACCAATGAAGATGATGGGGTTGTCATATCT
ACTGCAAGCACCATGGACGGTGACGGCTACGTGCTGCTGCTGGACGCGGCGACGTTCAAA
GAGATTGCCCGCTTGCGGTTACCTTACGGCCTACCCTTCGGCTTCCACGGCTGCTGGATC
CCAGACAACAACTGA

Peptide Sequence

PEP ID

OQU80715
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:60503029:60506362:-1 gene:SORBI_3007G170300 transcript:OQU80715 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAACKLPTLCTAPTPYLYASRRSAGQTIISTAAASACHRCRASRRRIQAAGDCTKHSAWT
SIRHERWEGDLAIEGHIPAWLNGTYLRNGPGVWEVGDHALDHVFDGYATLVRVYFQGARG
RATGAHRQIESDAYKAAARAHGRRRPLMRMREFSQLCPSEPGTLLDRLRHVVGLVTGAGM
SDNANTAVLPLGDGRVVCLADVTKSSVLVDPETLETVGKLRYADRLWCPVQCTHPVVTTT
TTTTTRAAAAAEVLMLHPDFARRGYLVARMMAAGGTGSNDRREVVGRVRCRGGTTPAWVH
SFAVTAKYIVVPEMPLRYSVACLLMSELTPFYIMDWLPHSGSYMHVICRSTGNTVASVEV
PPFVAFHFINAYEENGDDDDGVRPNAIIADCCEYYADPAIIQALALHRLRSPETAKDFPD
SRIPLDGSAAMGELETVLDPEEHGRGVELSTINPDYVGKEYRYLYACTARRPCNFFNALT
KMDLVEKETTSWHEEGTVPSEPFFVARPGATNEDDGVVISTASTMDGDGYVLLLDAATFK
EIARLRLPYGLPFGFHGCWIPDNN

Transcript Sequence

Transcript ID

OQU80715
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:60503029:60506362:-1 gene:SORBI_3007G170300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GTATATAACAAGTCTAACAAGAGCTAGGCGAAGGAAGCAAATAAGCAGCATGGCCGCCTG
CAAACTCCCCACGCTTTGCACTGCCCCTACACCATACTTATATGCCTCTCGCCGCTCCGC
CGGCCAAACCATCATCAGCACGGCAGCGGCATCGGCATGTCATCGTTGCCGCGCCAGTCG
TCGTCGAATTCAAGCCGCTGGAGATTGCACAAAGCATTCTGCTTGGACCAGCATCCGACA
CGAACGGTGGGAAGGTGACTTGGCCATAGAAGGACACATCCCTGCTTGGCTGAACGGCAC
GTACCTAAGGAACGGGCCAGGTGTGTGGGAGGTAGGCGACCACGCGTTGGATCACGTCTT
CGACGGCTACGCCACACTGGTCCGTGTCTACTTCCAGGGCGCTCGTGGCCGTGCTACCGG
CGCGCACAGGCAGATCGAGTCCGACGCATACAAGGCCGCCGCCAGGGCGCACGGCCGCCG
CCGTCCGCTCATGCGCATGCGCGAGTTCTCCCAGCTGTGCCCTAGCGAGCCGGGCACCCT
CCTCGACCGCCTCCGGCACGTCGTCGGGCTCGTCACCGGCGCCGGCATGTCCGACAACGC
CAACACCGCGGTGCTCCCACTCGGGGATGGCCGGGTGGTGTGCCTCGCCGACGTCACCAA
GAGCTCGGTGCTCGTCGACCCGGAGACACTCGAGACGGTCGGCAAGCTCCGGTACGCGGA
CAGGCTGTGGTGCCCGGTGCAGTGCACGCACCCGGTGGTGACGACGACGACGACGACGAC
GACCCGCGCCGCCGCCGCCGCCGAGGTCTTGATGCTGCACCCGGACTTTGCCCGGCGGGG
CTACCTCGTGGCCAGGATGATGGCAGCTGGTGGGACTGGGAGCAACGACAGGCGGGAGGT
GGTCGGGAGGGTGCGGTGCCGGGGAGGCACGACGCCGGCGTGGGTGCACTCGTTCGCCGT
CACGGCGAAGTACATCGTCGTGCCGGAGATGCCGCTCCGGTACTCGGTCGCCTGCTTGCT
CATGTCCGAGCTCACCCCGTTTTACATAATGGACTGGCTACCACACTCCGGGAGCTACAT
GCACGTCATATGCAGATCCACTGGAAACACTGTGGCGAGCGTCGAGGTGCCTCCTTTCGT
GGCATTTCACTTCATCAACGCATACGAGGAGAATGGTGATGATGACGACGGTGTCCGGCC
CAACGCCATCATCGCCGACTGCTGCGAGTACTACGCTGATCCTGCTATCATCCAGGCACT
TGCTCTCCACAGGCTTAGATCGCCGGAGACGGCCAAGGACTTCCCTGATTCCAGAATACC
CCTGGACGGCAGCGCCGCCATGGGCGAGCTGGAGACAGTGCTGGACCCTGAAGAGCACGG
CCGGGGTGTGGAGTTGAGCACCATCAACCCAGACTACGTCGGCAAGGAGTACCGCTACTT
GTACGCCTGCACCGCGCGCCGGCCATGCAATTTCTTCAACGCGCTCACCAAGATGGACCT
GGTGGAGAAGGAGACCACGAGCTGGCATGAGGAGGGCACGGTGCCATCGGAGCCCTTCTT
TGTGGCCAGGCCGGGAGCAACCAATGAAGATGATGGGGTTGTCATATCTACTGCAAGCAC
CATGGACGGTGACGGCTACGTGCTGCTGCTGGACGCGGCGACGTTCAAAGAGATTGCCCG
CTTGCGGTTACCTTACGGCCTACCCTTCGGCTTCCACGGCTGCTGGATCCCAGACAACAA
CTGAAACTGAAGAAGCTTATCCGTATTGCCAGTCATCGGTGCTTATATTGACGCAAAAGC
TACCATGCATATGGCTGCTCCTTCTCGTCTTCAAGCGCCACAGTAGTAGCTAGTGTGCTC
ATTGAATATATACTGTATATGGGTTCATCAAAAAAAAAATACTATATGCAGTGGAGGATC
TAGAGAGGCTCCTACTCCTTATTTCAGCTAGTGCCTTCCATAATAAGATGCTCTTTTCTG
AGAGAATCGAGTGCATGTTCATGCATGTTCGGTGGAACAGCTAGCTCGATCTTTTGTGGT
TCAGAAGTTTATATTCCTTTTTGAGTAAAAAGAATGCACCAGAGGTTCATTAATTAACTT
ACGAGGAGGTGTTATATAGGTCCATCAACTCTCAAACTGTGCTTTTGGATCCTTAACTTT
CTATTAAGCGGTTCAGCAGATGTTCATGCTC