Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU80706
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:60271519:60278355:-1 gene:SORBI_3007G167500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCCGCCGCCGCTTCGCCTCCGGTTCCTTTAGGACCCGAAGCCTCCGCTCTCCTG
GACGGGGATCGCCGTCCCAAGCCCGCTGTGGCAATCTCATGGGATTCCCCAGCATTACGC
AGCCATGCAGAAAGGTGTGAGATCGAATCAGAAGCATGTGTCATTGATCCTTCTCTGCTT
CCAGTTCTAGAGGAATTATTGCAGGACACCTATGCATCATTGCAACCACAGCCAGTGGAC
TATGAACACCGATATCATATGATTAACATTTTCAACAAAATCGCTGAAGGAATTTTTGGT
AAAAATAATGGGCTTCCAATTGTGGAACCATTTGGATCTTTCATAATGGATCTATTTACT
CCTAAAAGTGACCTGGACCTCTCTATCAACTTTAATACTGATACAAATGATCAGTATCCT
CGCAGGAACAAGATTTATGCTATTAGGAAGCTTGCAAATGTTCTATTTTCTCATCAGCGT
CAAGGTCTCTGTCATGGTGTTTCACCTATTGTGACTGCTAGAGTTCCTGTACTGAAGGTT
ATTGATCAGAAAACTGGTGTAGAGTGTGATATTTCAGTAGAAAACAAGGATGGGATGTCA
AGATCAGTGATATTTAAATTTATTTCATCAATTGATAAAAGATTCCGGATACTTTGTTAT
CTGATGAAGTTCTGGGCTAAGGTACATGATGTTAACTGCCCCAAAGATCGAACAATGAGC
TCCATGGCAATTATTTCTTTAGTTGCTTTCCATTTGCAGACAAGGCGTCCTCCAATATTA
CCTGCATTTTCTGCCATATTGAAAGATGGTACAGATTTTGCAAGTATTGAGAAGAATGTA
TCGCTATTCGAGGGTTTTGGGGACAGCAATAAAGAGTCTATTACTGAACTTTTTGTATCA
CTAATGAATAAACTAGTGTCAGTGGAGGGTTTATGGGAACAAGGGCTCTGTGCGAGCAAT
TTTGAAGGGTCATGGATATCGAAGACCTGGGCGAAGGGTGTTGGCAACTTGAATGTTGAG
GACTTCTTGGACCGATCTCAGAATTTTGCCAGATCGGTAGGGATGAAGGAGATGCAGAAA
ATCTGTGAATGCCTAAGGGCTACTGTTTCTGATTTGAGCAAGTTTTCTAAGGGTAAAATT
GCTGCGCCCAAGCTAAAGGCCCTGTTGTTTAAGCCTTTGAACCAGGTTAACCCAGTCACT
AATCCCTGTCAGAAAACTGTTAAGAGGAAGCGTGCTAATCCAAATAAGACAAGCACTAAC
CCTATTCAGAAAAACGCTAAGAAGAAGAAGGCTCTTGAGCAGGATAAACTAGCCATATCT
CCTGGTCAGAAAGATGGTACGAAGCCCCTTGATCAGGAGAAGTCAGTTAGTTCTCCCATT
CAGAAAGATGATAAGAAGATCAAGCCCCTTGACCAGGATAAGCTAGTCATTTCTCGTGGC
CAGAAAGATGACAAGAAGAAGCCCCTTGTGCAGGATAAGACATTAATTTCCCCCATCCAG
AAGGATAACAAGAAGCCTCTTGATCAAGAGAAGTCCCTTGGGCTGGAGAAGCTAATCATC
CCTCGTGGACAGAAAGGTAAGAAGAAGAGCAGCAAGGTGAGACCTGACTCAGGAAGCAGT
CATGTGCAACAAAAGAAAGTGAAGGCTACTGTATCCACTGGCCGTGCTGCTAATACTCAT
GTTTCTAGTTCAAGGCCTCGTCCTGTTTTTATCCCCCAAGCACATCGGTCCACCCAGCCA
ATTGTTGATCAGTTTGCGCATATACCTCAGCACCTGATCAGCCCTTCTGCTTTTGGTTAT
GGGTTGCCACCGCCACATCTGCATCCAGCCTATCCTCATCCTCATCCTCATCAAGGATTG
TTAGGTCAACCACAGGGTAATTTCCTTCATTTCAATCCTGGTATTCAGCTGCAGCATCAA
GGCCAGGCTTTCTTTGGCCCTCCACCCATCCGCCATCCCATGGCAAATGGGTTTCTTCAC
CCATTCGGTATCAGTAGTGCTCAGCAAGTGCCGCGCATTGACAATAGATTTGTGCAGAGG
CCGCCATATGGTTTTGGTCCGGGTTTCTGGTGA

Peptide Sequence

PEP ID

OQU80706
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:60271519:60278355:-1 gene:SORBI_3007G167500 transcript:OQU80706 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAAAASPPVPLGPEASALLDGDRRPKPAVAISWDSPALRSHAERCEIESEACVIDPSLL
PVLEELLQDTYASLQPQPVDYEHRYHMINIFNKIAEGIFGKNNGLPIVEPFGSFIMDLFT
PKSDLDLSINFNTDTNDQYPRRNKIYAIRKLANVLFSHQRQGLCHGVSPIVTARVPVLKV
IDQKTGVECDISVENKDGMSRSVIFKFISSIDKRFRILCYLMKFWAKVHDVNCPKDRTMS
SMAIISLVAFHLQTRRPPILPAFSAILKDGTDFASIEKNVSLFEGFGDSNKESITELFVS
LMNKLVSVEGLWEQGLCASNFEGSWISKTWAKGVGNLNVEDFLDRSQNFARSVGMKEMQK
ICECLRATVSDLSKFSKGKIAAPKLKALLFKPLNQVNPVTNPCQKTVKRKRANPNKTSTN
PIQKNAKKKKALEQDKLAISPGQKDGTKPLDQEKSVSSPIQKDDKKIKPLDQDKLVISRG
QKDDKKKPLVQDKTLISPIQKDNKKPLDQEKSLGLEKLIIPRGQKGKKKSSKVRPDSGSS
HVQQKKVKATVSTGRAANTHVSSSRPRPVFIPQAHRSTQPIVDQFAHIPQHLISPSAFGY
GLPPPHLHPAYPHPHPHQGLLGQPQGNFLHFNPGIQLQHQGQAFFGPPPIRHPMANGFLH
PFGISSAQQVPRIDNRFVQRPPYGFGPGFW

Transcript Sequence

Transcript ID

OQU80706
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:60271519:60278355:-1 gene:SORBI_3007G167500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCCGCCGCCGCTTCGCCTCCGGTTCCTTTAGGACCCGAAGCCTCCGCTCTCCTG
GACGGGGATCGCCGTCCCAAGCCCGCTGTGGCAATCTCATGGGATTCCCCAGCATTACGC
AGCCATGCAGAAAGGTGTGAGATCGAATCAGAAGCATGTGTCATTGATCCTTCTCTGCTT
CCAGTTCTAGAGGAATTATTGCAGGACACCTATGCATCATTGCAACCACAGCCAGTGGAC
TATGAACACCGATATCATATGATTAACATTTTCAACAAAATCGCTGAAGGAATTTTTGGT
AAAAATAATGGGCTTCCAATTGTGGAACCATTTGGATCTTTCATAATGGATCTATTTACT
CCTAAAAGTGACCTGGACCTCTCTATCAACTTTAATACTGATACAAATGATCAGTATCCT
CGCAGGAACAAGATTTATGCTATTAGGAAGCTTGCAAATGTTCTATTTTCTCATCAGCGT
CAAGGTCTCTGTCATGGTGTTTCACCTATTGTGACTGCTAGAGTTCCTGTACTGAAGGTT
ATTGATCAGAAAACTGGTGTAGAGTGTGATATTTCAGTAGAAAACAAGGATGGGATGTCA
AGATCAGTGATATTTAAATTTATTTCATCAATTGATAAAAGATTCCGGATACTTTGTTAT
CTGATGAAGTTCTGGGCTAAGGTACATGATGTTAACTGCCCCAAAGATCGAACAATGAGC
TCCATGGCAATTATTTCTTTAGTTGCTTTCCATTTGCAGACAAGGCGTCCTCCAATATTA
CCTGCATTTTCTGCCATATTGAAAGATGGTACAGATTTTGCAAGTATTGAGAAGAATGTA
TCGCTATTCGAGGGTTTTGGGGACAGCAATAAAGAGTCTATTACTGAACTTTTTGTATCA
CTAATGAATAAACTAGTGTCAGTGGAGGGTTTATGGGAACAAGGGCTCTGTGCGAGCAAT
TTTGAAGGGTCATGGATATCGAAGACCTGGGCGAAGGGTGTTGGCAACTTGAATGTTGAG
GACTTCTTGGACCGATCTCAGAATTTTGCCAGATCGGTAGGGATGAAGGAGATGCAGAAA
ATCTGTGAATGCCTAAGGGCTACTGTTTCTGATTTGAGCAAGTTTTCTAAGGGTAAAATT
GCTGCGCCCAAGCTAAAGGCCCTGTTGTTTAAGCCTTTGAACCAGGTTAACCCAGTCACT
AATCCCTGTCAGAAAACTGTTAAGAGGAAGCGTGCTAATCCAAATAAGACAAGCACTAAC
CCTATTCAGAAAAACGCTAAGAAGAAGAAGGCTCTTGAGCAGGATAAACTAGCCATATCT
CCTGGTCAGAAAGATGGTACGAAGCCCCTTGATCAGGAGAAGTCAGTTAGTTCTCCCATT
CAGAAAGATGATAAGAAGATCAAGCCCCTTGACCAGGATAAGCTAGTCATTTCTCGTGGC
CAGAAAGATGACAAGAAGAAGCCCCTTGTGCAGGATAAGACATTAATTTCCCCCATCCAG
AAGGATAACAAGAAGCCTCTTGATCAAGAGAAGTCCCTTGGGCTGGAGAAGCTAATCATC
CCTCGTGGACAGAAAGGTAAGAAGAAGAGCAGCAAGGTGAGACCTGACTCAGGAAGCAGT
CATGTGCAACAAAAGAAAGTGAAGGCTACTGTATCCACTGGCCGTGCTGCTAATACTCAT
GTTTCTAGTTCAAGGCCTCGTCCTGTTTTTATCCCCCAAGCACATCGGTCCACCCAGCCA
ATTGTTGATCAGTTTGCGCATATACCTCAGCACCTGATCAGCCCTTCTGCTTTTGGTTAT
GGGTTGCCACCGCCACATCTGCATCCAGCCTATCCTCATCCTCATCCTCATCAAGGATTG
TTAGGTCAACCACAGGGTAATTTCCTTCATTTCAATCCTGGTATTCAGCTGCAGCATCAA
GGCCAGGCTTTCTTTGGCCCTCCACCCATCCGCCATCCCATGGCAAATGGGTTTCTTCAC
CCATTCGGTATCAGTAGTGCTCAGCAAGTGCCGCGCATTGACAATAGATTTGTGCAGAGG
CCGCCATATGGTTTTGGTCCGGGTTTCTGGTGA