Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU80479
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:55672578:55675030:-1 gene:SORBI_3007G133600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCATTGGGCGTGGTCGGCCTCGTGCTCGCATTGCCACTCTTGTTCTTGCTGACAAGG
GCGGCATGGATCACTGTCTCCTGCTACTACCTCACGCCGGCGAGGATCCGGACAATCCTG
GCCGGCCAGGGCGTGCACGGCCCGCCGCCACGCCTCCTCGTCGGGAACCTCCGCGACGTC
TCTGCCCTCGTCGCCGAGGCCACCGCCGGTGACATGAGCTCCCTGAGCCACGACATCGTC
GGCCGCCTTCTTCCCCATTATGTCCTGTGGTCCAAGATGTACGGGAGGCTGTTCGTGTAC
TGGTACGGGAGCGAGCCCCGGGTGTGCGTGACGGACGCGGGCATGGTGCGGGAGCTGCTG
TCGTCGAGGCACGCGCACGTCACCGGCAAGTCGTGGCTGCAGCGGCAGGGCGCCAAGCAC
TTCATCGGCCGCGGCCTGATCATGGCCAACGGCGCGACGTGGTCGCACCAGCGCCACGTG
GTGGCGCCGGCGTTCATGGCCGACAGGCTCCGTGGCAGGGTGGGGCACATGGCGGAGTGC
GCCCGGCAGACGGCGCGCGCGCTGCGTGAGGCGGTGGCGCGCGCCGGCAACGAGGTGGAG
GTGGGCGCGCACATGGCGAGGCTCGCCGGCGACATCATCGCCCGCACCGAGTTCGACACC
AGCTACGACACCGGGAAGCGCATCTTCGACCTCATCGAGGAGCTGCAGCGGCTGACGGCG
CGCTCCAGCCGCCACCTCTGGGTCCCTGGCAGCCAGTATTTACCAAGCAAATACAGGCGG
GAAATAAAGCGGTTGAACGGGGAGCTGGAGCAGCTGCTCAAGGAGTCCATCGAGCGCAGC
CGCGAGATCGCCGACGAGGGCCGGACGCCGTCGTCGGCGTGCGGCATGGGGCTCCTCGGT
ATGCTGCTGGCCGAGATGGAGAAGAACAAGAACGACGGCGAGCTGGGGTACGACGCCCAG
ATGATGATCGACGAGTGCAAGACGTTCTTCTTCGCCGGGCACGAGACGTCGGCGCTGCTC
CTCACCTGGGCCATCATGCTGCTCGCCACCAACCCTTCGTGGCAGGACAAGGCGCGCGCC
GAGGTCGCGGGCGTCTGCGGCGGCGCACCGCCCACCGCCGACCACCTCCCCAAGCTCACC
GTGCTGCAGATGGTGATCAACGAGACGCTCCGGCTGTACCCGCCGGCGACGCTGCTGCCG
CGGATGGCGTTCGAGGACATCACGCTCGGCTCCGGCCCCGGCGACGAGCTGCGCGTGCCC
AAGGGCGCGTCGCTGTGGATCCCCTTGCTGGCCATCCACCACGACGAGGCCGTGTGGGGA
GCGGACGCGCACGAGTTCAGGCCGGACCGGTTCGCGCCGGGGAGGCCCCGGCCGTGGGCG
GGGCGGTTCCTGCCGTTCGCGTCGGGGCCCCGCAACTGCGTCGGCCAGGCGTACGCCATG
GTCGAGGCCAAGGTCGTGCTGGCCGTGATGCTCGCCAGCTTCCGCTTCGGCATCTCCGAC
GAGTACCGCCACGCGCCCGTCAACGTGCTCACGCTCCGGCCGCGCCACGGCGTGCCCGTG
CGCCTGCTGCCGTTGACGCCGCAGTAG

Peptide Sequence

PEP ID

OQU80479
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:55672578:55675030:-1 gene:SORBI_3007G133600 transcript:OQU80479 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MALGVVGLVLALPLLFLLTRAAWITVSCYYLTPARIRTILAGQGVHGPPPRLLVGNLRDV
SALVAEATAGDMSSLSHDIVGRLLPHYVLWSKMYGRLFVYWYGSEPRVCVTDAGMVRELL
SSRHAHVTGKSWLQRQGAKHFIGRGLIMANGATWSHQRHVVAPAFMADRLRGRVGHMAEC
ARQTARALREAVARAGNEVEVGAHMARLAGDIIARTEFDTSYDTGKRIFDLIEELQRLTA
RSSRHLWVPGSQYLPSKYRREIKRLNGELEQLLKESIERSREIADEGRTPSSACGMGLLG
MLLAEMEKNKNDGELGYDAQMMIDECKTFFFAGHETSALLLTWAIMLLATNPSWQDKARA
EVAGVCGGAPPTADHLPKLTVLQMVINETLRLYPPATLLPRMAFEDITLGSGPGDELRVP
KGASLWIPLLAIHHDEAVWGADAHEFRPDRFAPGRPRPWAGRFLPFASGPRNCVGQAYAM
VEAKVVLAVMLASFRFGISDEYRHAPVNVLTLRPRHGVPVRLLPLTPQ

Transcript Sequence

Transcript ID

OQU80479
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:55672578:55675030:-1 gene:SORBI_3007G133600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGCACCGGCACTGGCAGCTGCGAACGGTACAAGGCCGGCATGGCATTGGGCGTGGTCGGC
CTCGTGCTCGCATTGCCACTCTTGTTCTTGCTGACAAGGGCGGCATGGATCACTGTCTCC
TGCTACTACCTCACGCCGGCGAGGATCCGGACAATCCTGGCCGGCCAGGGCGTGCACGGC
CCGCCGCCACGCCTCCTCGTCGGGAACCTCCGCGACGTCTCTGCCCTCGTCGCCGAGGCC
ACCGCCGGTGACATGAGCTCCCTGAGCCACGACATCGTCGGCCGCCTTCTTCCCCATTAT
GTCCTGTGGTCCAAGATGTACGGGAGGCTGTTCGTGTACTGGTACGGGAGCGAGCCCCGG
GTGTGCGTGACGGACGCGGGCATGGTGCGGGAGCTGCTGTCGTCGAGGCACGCGCACGTC
ACCGGCAAGTCGTGGCTGCAGCGGCAGGGCGCCAAGCACTTCATCGGCCGCGGCCTGATC
ATGGCCAACGGCGCGACGTGGTCGCACCAGCGCCACGTGGTGGCGCCGGCGTTCATGGCC
GACAGGCTCCGTGGCAGGGTGGGGCACATGGCGGAGTGCGCCCGGCAGACGGCGCGCGCG
CTGCGTGAGGCGGTGGCGCGCGCCGGCAACGAGGTGGAGGTGGGCGCGCACATGGCGAGG
CTCGCCGGCGACATCATCGCCCGCACCGAGTTCGACACCAGCTACGACACCGGGAAGCGC
ATCTTCGACCTCATCGAGGAGCTGCAGCGGCTGACGGCGCGCTCCAGCCGCCACCTCTGG
GTCCCTGGCAGCCAGTATTTACCAAGCAAATACAGGCGGGAAATAAAGCGGTTGAACGGG
GAGCTGGAGCAGCTGCTCAAGGAGTCCATCGAGCGCAGCCGCGAGATCGCCGACGAGGGC
CGGACGCCGTCGTCGGCGTGCGGCATGGGGCTCCTCGGTATGCTGCTGGCCGAGATGGAG
AAGAACAAGAACGACGGCGAGCTGGGGTACGACGCCCAGATGATGATCGACGAGTGCAAG
ACGTTCTTCTTCGCCGGGCACGAGACGTCGGCGCTGCTCCTCACCTGGGCCATCATGCTG
CTCGCCACCAACCCTTCGTGGCAGGACAAGGCGCGCGCCGAGGTCGCGGGCGTCTGCGGC
GGCGCACCGCCCACCGCCGACCACCTCCCCAAGCTCACCGTGCTGCAGATGGTGATCAAC
GAGACGCTCCGGCTGTACCCGCCGGCGACGCTGCTGCCGCGGATGGCGTTCGAGGACATC
ACGCTCGGCTCCGGCCCCGGCGACGAGCTGCGCGTGCCCAAGGGCGCGTCGCTGTGGATC
CCCTTGCTGGCCATCCACCACGACGAGGCCGTGTGGGGAGCGGACGCGCACGAGTTCAGG
CCGGACCGGTTCGCGCCGGGGAGGCCCCGGCCGTGGGCGGGGCGGTTCCTGCCGTTCGCG
TCGGGGCCCCGCAACTGCGTCGGCCAGGCGTACGCCATGGTCGAGGCCAAGGTCGTGCTG
GCCGTGATGCTCGCCAGCTTCCGCTTCGGCATCTCCGACGAGTACCGCCACGCGCCCGTC
AACGTGCTCACGCTCCGGCCGCGCCACGGCGTGCCCGTGCGCCTGCTGCCGTTGACGCCG
CAGTAGGCTGCTCTTGGTGTTCTTGCTTCTTCACAATTTTGGAACATCTGTGTTTTACGT
TTGTGATTTTCTTTTCTTTCTTTTTTTTTTGTGTCTTGACTACTAGTAGATGGAGAAAAT
TTTGTGCTTCGGTTCACTAGCGGTGGTCTGACATATGTAGAAATATAACATAATATTATT
TTACTTATTTAGAGTCAACATTTTGTTGACGGTGTTTTTTTGTCAGTGATGAGAAACAAT
CTTGCAGATTGTATCAAAAATCGAAGTGTAAAAATGTCGCTGAGGGCAGGAGATTCGCCG
GAATTGATTTTCCAT