Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU80142
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:10939797:10959959:-1 gene:SORBI_3007G085800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTGGAGGCTCAAGGTCGCCGAGGGGGGCGGGCCATGGCTGAAGTCGTGCAACAACTTC
CGCGGGCGGGTGGTGTGGGAGTTCGACCCGGAGCTCGGCACGCCAGAGGAGCGCGCCGAG
GTGGAGAGGGTGCGCCGGGAGTTCACGGAGCGCCGCTTCGAGAAGAGGGAGTCCTCTGAT
CTCTTATTGCGTATGCAGTATGCAAAGCATAAACATCTTCAGGTGGATCCTCCACCCACC
AAGCTCGCAGAAAATGTAGAAGTCACAGAGGAGATCATATTAGCGGCATTGAGGCGAGCC
CTCGATCAACATTCAAGTCTGCAAGCAGAAGATGGGTGCTGGCCAGCCGACTATAGTGGC
ATTTTGTTCATTATGCCTCTCCTGGTATTCGCTCTATATACCACTGGGTCACTCGATACC
GTCCTATCTAAAGAACATCGACGTGAGATATGTCGCTATATTTACAATCATCAGAATGAA
GATGGTGGCTGGGGTAAACAAGTGTTGGGACCAAGCACCATGTTCGGCTCATGCTTGAAC
TATGTTGCCTTAAGACTTATTGGTGAAAAGCCCACGAATGCTGCATTGACCAAAGGACGT
CAGTGGATTTTATCCCATGGAAGTGCAGCTGCAATTCCACAGTGGGGAAAGATATGGTTC
TCGGTGATGGGTTTGTATGATTGGTCTGGAAATAATCCAATAGTTCCTGAATTATGGCTT
GTCCCACACTTTCTTCCAATTCATCCAGGACGATTTTGGGTATTTTGTCGTATGGTGTAT
CTGCCTATGGCTTATCTCTTTGGTAGAAAATTCATCGGAACGATTACTCCAACTATATTG
GAATTAAGGGATGAGCTCTATTCCGTACCATACAGTGAGGTTGATTGGGAAAAAGCTCGT
GATACTTGTGCCAAGGTGGACCTTATATATCCTCGAACAATGGCACAAAATCTTGTATGG
ACCTGCCTTAATAAGGTTATAGAGCCAATGCTGAATTGTTGGCCAGTAAATAAGTTAAGA
GATATAGCATTGAAAAACATCATGAAACATATCCACTACGAAGATGAAACTAGTAAATAC
ATCTGTACATGTCCGATAAACAAGGCGCTAGATATGATTTGTTGTTGGGCAGAGAATCCA
AATTCAGATTCATTCAAAAAACATCTTCCAAGGATATATGATATGTTATGGATTGCGGAA
GATGGCATGAAGGCACAGGTCTATGATGGTAATCCAACATGGGAGACTTCTTTCATTGTC
CAAGCCTATTGCTCCACAGGTCTTGTTAATGAGATTGGTTCAACACTCCGTAAAGCTCAT
GAATTTATTAAGAGTTCACAGATTTGTGAGAACCACCCCGACTACAAAACTTACTACCGT
CATAAATCAAAAGGTTCATGGACACTTTCAACAGCAGATAATGGATGGTCAGTATCTGAC
TGTACTGCTGAAGCAGTGAAGGCATTGATGTTGTTATCAAAGATTTCCCCAGATCTTGTG
GGGGAACCCATAGAAGGACAAAGTTTGTACAATGCAGTGGATTGCCTACTTTCTTATGTG
AACAATGATGGCACCTTCTCAACATATGAGTGTAAGAGAACCACACCTTTATTGGAGGTT
CTCAACCCTTCAGAGAGCTTTATAAATATTGTTGTTGATTATCCATCTGTTGAATGCACA
TCATCAGTGCTACAAGCTCTGATTATGTTCAGAGACCTAGATCATGGGTATCGCAAAGAA
GAGATAGGAAATTGCATTGAAAGCGCAACTAAGTTTATTGAGAAAGAACAACGAAAAGAT
GGCTCCTGGTTTGGCAGTTGGGGTGTATGTTTCACATATGGGTCGTTCTTTGCGATAAAA
GGGTTAGCTGCTTCTGGAAGAACTTACAAAAATAGTGATACCATCAGGAAAGCATGTAAC
TTTTTGTTGTCGAAGCAACTACATACAGGTGGATGGGGAGAAAGTTATCTTTCTAGTGAA
ACTGAGGAATATGTGGATGCTAGTAGACCTCATGCTGTGAACACTGCTTGGGCAATGTTA
GCCTTAGTTTATGGTGGGCAGGTGGAACGTGATCCAACACCATTATATAAAGCTGCAAAA
GTGTTGATCAATATGCAACTAGAATCTGGTGACTTTCCACAACAACAAAAAAATATTTAT
CAATATTGTCTTTTCAAGGTCTCCAAGGGATCGGAACTAGATTATTACCTTTCCTGA

Peptide Sequence

PEP ID

OQU80142
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:10939797:10959959:-1 gene:SORBI_3007G085800 transcript:OQU80142 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MWRLKVAEGGGPWLKSCNNFRGRVVWEFDPELGTPEERAEVERVRREFTERRFEKRESSD
LLLRMQYAKHKHLQVDPPPTKLAENVEVTEEIILAALRRALDQHSSLQAEDGCWPADYSG
ILFIMPLLVFALYTTGSLDTVLSKEHRREICRYIYNHQNEDGGWGKQVLGPSTMFGSCLN
YVALRLIGEKPTNAALTKGRQWILSHGSAAAIPQWGKIWFSVMGLYDWSGNNPIVPELWL
VPHFLPIHPGRFWVFCRMVYLPMAYLFGRKFIGTITPTILELRDELYSVPYSEVDWEKAR
DTCAKVDLIYPRTMAQNLVWTCLNKVIEPMLNCWPVNKLRDIALKNIMKHIHYEDETSKY
ICTCPINKALDMICCWAENPNSDSFKKHLPRIYDMLWIAEDGMKAQVYDGNPTWETSFIV
QAYCSTGLVNEIGSTLRKAHEFIKSSQICENHPDYKTYYRHKSKGSWTLSTADNGWSVSD
CTAEAVKALMLLSKISPDLVGEPIEGQSLYNAVDCLLSYVNNDGTFSTYECKRTTPLLEV
LNPSESFINIVVDYPSVECTSSVLQALIMFRDLDHGYRKEEIGNCIESATKFIEKEQRKD
GSWFGSWGVCFTYGSFFAIKGLAASGRTYKNSDTIRKACNFLLSKQLHTGGWGESYLSSE
TEEYVDASRPHAVNTAWAMLALVYGGQVERDPTPLYKAAKVLINMQLESGDFPQQQKNIY
QYCLFKVSKGSELDYYLS

Transcript Sequence

Transcript ID

OQU80142
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:10939797:10959959:-1 gene:SORBI_3007G085800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTGGAGGCTCAAGGTCGCCGAGGGGGGCGGGCCATGGCTGAAGTCGTGCAACAACTTC
CGCGGGCGGGTGGTGTGGGAGTTCGACCCGGAGCTCGGCACGCCAGAGGAGCGCGCCGAG
GTGGAGAGGGTGCGCCGGGAGTTCACGGAGCGCCGCTTCGAGAAGAGGGAGTCCTCTGAT
CTCTTATTGCGTATGCAGTATGCAAAGCATAAACATCTTCAGGTGGATCCTCCACCCACC
AAGCTCGCAGAAAATGTAGAAGTCACAGAGGAGATCATATTAGCGGCATTGAGGCGAGCC
CTCGATCAACATTCAAGTCTGCAAGCAGAAGATGGGTGCTGGCCAGCCGACTATAGTGGC
ATTTTGTTCATTATGCCTCTCCTGGTATTCGCTCTATATACCACTGGGTCACTCGATACC
GTCCTATCTAAAGAACATCGACGTGAGATATGTCGCTATATTTACAATCATCAGAATGAA
GATGGTGGCTGGGGTAAACAAGTGTTGGGACCAAGCACCATGTTCGGCTCATGCTTGAAC
TATGTTGCCTTAAGACTTATTGGTGAAAAGCCCACGAATGCTGCATTGACCAAAGGACGT
CAGTGGATTTTATCCCATGGAAGTGCAGCTGCAATTCCACAGTGGGGAAAGATATGGTTC
TCGGTGATGGGTTTGTATGATTGGTCTGGAAATAATCCAATAGTTCCTGAATTATGGCTT
GTCCCACACTTTCTTCCAATTCATCCAGGACGATTTTGGGTATTTTGTCGTATGGTGTAT
CTGCCTATGGCTTATCTCTTTGGTAGAAAATTCATCGGAACGATTACTCCAACTATATTG
GAATTAAGGGATGAGCTCTATTCCGTACCATACAGTGAGGTTGATTGGGAAAAAGCTCGT
GATACTTGTGCCAAGGTGGACCTTATATATCCTCGAACAATGGCACAAAATCTTGTATGG
ACCTGCCTTAATAAGGTTATAGAGCCAATGCTGAATTGTTGGCCAGTAAATAAGTTAAGA
GATATAGCATTGAAAAACATCATGAAACATATCCACTACGAAGATGAAACTAGTAAATAC
ATCTGTACATGTCCGATAAACAAGGCGCTAGATATGATTTGTTGTTGGGCAGAGAATCCA
AATTCAGATTCATTCAAAAAACATCTTCCAAGGATATATGATATGTTATGGATTGCGGAA
GATGGCATGAAGGCACAGGTCTATGATGGTAATCCAACATGGGAGACTTCTTTCATTGTC
CAAGCCTATTGCTCCACAGGTCTTGTTAATGAGATTGGTTCAACACTCCGTAAAGCTCAT
GAATTTATTAAGAGTTCACAGATTTGTGAGAACCACCCCGACTACAAAACTTACTACCGT
CATAAATCAAAAGGTTCATGGACACTTTCAACAGCAGATAATGGATGGTCAGTATCTGAC
TGTACTGCTGAAGCAGTGAAGGCATTGATGTTGTTATCAAAGATTTCCCCAGATCTTGTG
GGGGAACCCATAGAAGGACAAAGTTTGTACAATGCAGTGGATTGCCTACTTTCTTATGTG
AACAATGATGGCACCTTCTCAACATATGAGTGTAAGAGAACCACACCTTTATTGGAGGTT
CTCAACCCTTCAGAGAGCTTTATAAATATTGTTGTTGATTATCCATCTGTTGAATGCACA
TCATCAGTGCTACAAGCTCTGATTATGTTCAGAGACCTAGATCATGGGTATCGCAAAGAA
GAGATAGGAAATTGCATTGAAAGCGCAACTAAGTTTATTGAGAAAGAACAACGAAAAGAT
GGCTCCTGGTTTGGCAGTTGGGGTGTATGTTTCACATATGGGTCGTTCTTTGCGATAAAA
GGGTTAGCTGCTTCTGGAAGAACTTACAAAAATAGTGATACCATCAGGAAAGCATGTAAC
TTTTTGTTGTCGAAGCAACTACATACAGGTGGATGGGGAGAAAGTTATCTTTCTAGTGAA
ACTGAGGAATATGTGGATGCTAGTAGACCTCATGCTGTGAACACTGCTTGGGCAATGTTA
GCCTTAGTTTATGGTGGGCAGGTGGAACGTGATCCAACACCATTATATAAAGCTGCAAAA
GTGTTGATCAATATGCAACTAGAATCTGGTGACTTTCCACAACAACAAAAAAATATTTAT
CAATATTGTCTTTTCAAGGTCTCCAAGGGATCGGAACTAGATTATTACCTTTCCTGA