Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU80122
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:9795227:9797828:-1 gene:SORBI_3007G082500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCGCTCCGAGCAACATGACATCAGTGACAGTATCCTCGTTCACCCCAGAGATATTG
TACAGTGCACAAGTTGAATTCAAAATCCAAAACTACAATGAACGCATAAACATTGGCTAT
GCCACATTCCTAAGGTCGCCAGCCTTTACGGTTGGAGGTTATGAGTGGACACTCAACTAT
TACCCAGATGGCCGTTCTGAACAAACAGAGGGCCATGTCTCTGTTGCTCTTGAACTCATG
GGTACTGAAACTCTCTGGGCTATTCTAAGCTTGACATTTGCAGACCAAGTTGACAGGTCG
GCATGGGCAGGATGGGCAACAGCAGCATTCCTGAACAGTAACAACAATTTTACCTTTTAC
TGGCCTGAATTAAGAAGCGAGGTTTTCGAACAAATGGGGCTCGTGCAAAATGATTGCCTC
GAGATCCAGTGCCAGATTTCTGTTTGCAGGCCAAATCAGTTGTTAAAAGCCGGATTGCTT
CCTGAAGTTGAGGTTCCGGCATCTGATATGTTACAAAACCTAGGTAGGTTTATGGCCGAC
CATGTGGCTGCTGATGTGATGTTCAAGGTAGAACAAGAAACTTTCCAAGCTCATAGAATC
ATGCTAGCTGCATGTTCGCCTGTGTTCGATAAGCAGCTCAATGGTCAAATGAGAGAGAAA
GACATGGGCTGTATACTAGTGCATGACATGCAACCTGCTGTCTTCCAGGCTCTTTTGCAT
TTTGTATATACAGATTCACTGATTGATATGAGTGACAAAGTTGTTGGTGACCAGATTGAG
CTGATTCGACATTTGCTTGTCGCTGCTGATCGCTACTGTATGGACAGACTGAAGAATATA
TGTGAAGGCATCTTGTGCAAATGTGTGGATATGGAGAGCCTGCTAACGACCGTAGGGTTA
GCGGACCAGTATCATTGCATGAAGCTTCTTGCTGCTTGTGTGGACTTCCTCAAATATTCA
GTGCAGAGGGACATTGTTGAAAGTCAGTGGTATCAGGTGCTCAGGGATAACCATCCAGAT
GTTGCAGCTCAAATCTGCAAGGGAGTGGAGGATGTTCGAAAATTAATAAACTGA

Peptide Sequence

PEP ID

OQU80122
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:9795227:9797828:-1 gene:SORBI_3007G082500 transcript:OQU80122 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAPSNMTSVTVSSFTPEILYSAQVEFKIQNYNERINIGYATFLRSPAFTVGGYEWTLNY
YPDGRSEQTEGHVSVALELMGTETLWAILSLTFADQVDRSAWAGWATAAFLNSNNNFTFY
WPELRSEVFEQMGLVQNDCLEIQCQISVCRPNQLLKAGLLPEVEVPASDMLQNLGRFMAD
HVAADVMFKVEQETFQAHRIMLAACSPVFDKQLNGQMREKDMGCILVHDMQPAVFQALLH
FVYTDSLIDMSDKVVGDQIELIRHLLVAADRYCMDRLKNICEGILCKCVDMESLLTTVGL
ADQYHCMKLLAACVDFLKYSVQRDIVESQWYQVLRDNHPDVAAQICKGVEDVRKLIN

Transcript Sequence

Transcript ID

OQU80122
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:9795227:9797828:-1 gene:SORBI_3007G082500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATTCCATCACTGCAGAAACAGTTTCCTCAACGACTCTCTCTTTCTCTCTCAGGTGCTCCT
CTCTTTCTTCTCTCTTTTTTTTATGAAACCTCTCTTTCGCCTCTTAGATTTTCTTCGTTA
GACATCTCTTTTTTCTTATTCTTCTTCCCCGGATATAGGTGTATCTATGATGTATCTTTT
TTTTCTTATCCCTTTTCTCCTGATGTGATGTAACCGTGGTGTCCCTGAAATGATATCAAA
CTAAAAAATATTGCATAGCATGTTAAATAAGCAAAATTTTTATTATAGATTGTTGCCACA
AATGTTTTTTTTTGTGATCTATTAGGAGAGTTGCTTGAACTTTCAGCAACAATCTCTTAG
GCAACTCCCTTTAGTAAAACCAGCTTACATATATTCAGGTAAAGGTAGTTGTCTAATGAG
CTTCTTCATTATATCCTAGCAAAACATATATATGATATTCACTATAGATCAGCAACTAAC
AATAAATCATCCATTTTATCAAGTTGGACACAACAATAAAAATTTACCAGATTGAAATAT
ATATATCTGCAAATTAATTTTGGACACTGTTGGCTAAAAGTTTTACACTACAATGTTTTG
AGACGTTGAAATATCTCCTTTGTTCTTTAACATTATTTTCCTTATTTCAGCATTCTGATT
CATGTAAATTAATAGATGTCAAATTGAAAGAAAGAAATCGATTTTGCATTGCAAATGATT
GATTAAAAAATTGTGGAAAAATATTTACTGTGCATTTCATTTCTTTACTAATCTCTTCAT
TCCAAATTATAGACCATTCCTCTTCTAGATATGTAGCTTTTGCTATGTATCTAGATATGA
GCTATATCTCTAGATATACAATTTTTTTACATATCTAAAAAAGGTCGAACGCATTATAAT
TTAGAACAGAGGGAGTACATACAAATTAGTTCAGGATAAACATCTATATCCGTTTCCTTT
ATGTAGAATGTGCATATTCAACCTAGTAAATGATTAAGGATGTTAATTATATTTTATGAG
ATAACATACTATCATAATTCATAAAACAACATGCTTGCCTCGTAGAGGATTTTTGAGGCT
ATAATCCTACTGTATTTTTTTTTAGAAATTATATATTCCTATGTCATGGTACTATGAATC
TCTAACATTCCCTTTGCTCCATATTGTTCGCAATGCATGAGATATGTTCTCCATTTGAAA
TTATTCCTATGATTAGCAGGCTGCTCTAATTACCCAGATGGCCGCTCCGAGCAACATGAC
ATCAGTGACAGTATCCTCGTTCACCCCAGAGATATTGTACAGTGCACAAGTTGAATTCAA
AATCCAAAACTACAATGAACGCATAAACATTGGCTATGCCACATTCCTAAGGTCGCCAGC
CTTTACGGTTGGAGGTTATGAGTGGACACTCAACTATTACCCAGATGGCCGTTCTGAACA
AACAGAGGGCCATGTCTCTGTTGCTCTTGAACTCATGGGTACTGAAACTCTCTGGGCTAT
TCTAAGCTTGACATTTGCAGACCAAGTTGACAGGTCGGCATGGGCAGGATGGGCAACAGC
AGCATTCCTGAACAGTAACAACAATTTTACCTTTTACTGGCCTGAATTAAGAAGCGAGGT
TTTCGAACAAATGGGGCTCGTGCAAAATGATTGCCTCGAGATCCAGTGCCAGATTTCTGT
TTGCAGGCCAAATCAGTTGTTAAAAGCCGGATTGCTTCCTGAAGTTGAGGTTCCGGCATC
TGATATGTTACAAAACCTAGGTAGGTTTATGGCCGACCATGTGGCTGCTGATGTGATGTT
CAAGGTAGAACAAGAAACTTTCCAAGCTCATAGAATCATGCTAGCTGCATGTTCGCCTGT
GTTCGATAAGCAGCTCAATGGTCAAATGAGAGAGAAAGACATGGGCTGTATACTAGTGCA
TGACATGCAACCTGCTGTCTTCCAGGCTCTTTTGCATTTTGTATATACAGATTCACTGAT
TGATATGAGTGACAAAGTTGTTGGTGACCAGATTGAGCTGATTCGACATTTGCTTGTCGC
TGCTGATCGCTACTGTATGGACAGACTGAAGAATATATGTGAAGGCATCTTGTGCAAATG
TGTGGATATGGAGAGCCTGCTAACGACCGTAGGGTTAGCGGACCAGTATCATTGCATGAA
GCTTCTTGCTGCTTGTGTGGACTTCCTCAAATATTCAGTGCAGAGGGACATTGTTGAAAG
TCAGTGGTATCAGGTGCTCAGGGATAACCATCCAGATGTTGCAGCTCAAATCTGCAAGGG
AGTGGAGGATGTTCGAAAATTAATAAACTGAGTCTTTCTTATCATATTCAGAATAATTTT
GTTTATTGAAGTCTTATATATGTATGCCATTAGAATATTTTTGTTTGTAGAAGCTTATTA
TGTTAGAAGAGAGTTCAGCGCGGTCTGTTCTCTCCAGTTTTTTTTTTCTCTGTCGAATTC
TCAAAAGTCTTTGGTTGGACTCTAGATGCCAAAGCAGCATTTCCTCTGTGCAGGGGATTT
CACTCCCTGTGTATAAGCTCCCAGTTTCAGCCAACATTTGTATGAGTAGTTCTACTAATA
CTTGATGCAGTAATTATAAGTC