Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU80100
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:9193716:9197720:1 gene:SORBI_3007G078500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCACAAGGCGCCAACTTTCCAAACTTCATCGGCGCCGTGGGTGGCCATGATGATGGC
GTGAACTTTGGCGGGAACTTCTGTGACATGGCCTTCTACCAGAAGCTAGGGGAGGGCTCC
AACATGTCTGTTGATAGCATCAACAGCATGCAGACCAGCATGCATGGTGGATCCATCGCC
AGCAGCATTTGCTCTAACAGTGACTCCCGCACTGGCATGCTTGGCCATCCTGGTCTCAAG
GGGCCTGTCATTGTGGGAAGCTACTCAGTTGGGCACAGCATCTTCCGCCCTGGCCGGGTG
TCCCATGCCTTGAGTGAGGATGCACTGGCACATGCTCTGATGGACAACAAGTTCCCAACT
GAAACGCTAAAGGATTATGAGGAGTGGACTATTGATCTGGGGAACCTGCACATGGGCATG
GCCTTTGCACAAGGTGCCTTTGGGAAGCTCTACAGGGGAACATACAATGGGATGGATGTT
GCTATTAAGCTTTTGGAGCGACCTGAGGCTGACCCTGAGAAAGCTCAACTGTTGGAGCAG
CAGTTTGTCCAAGAAGTTATGATGCTTGCAACTCTGAGGCACCCGAATATTGTCAAATTC
ATTGGTGCGTGCAGGAAGCCATTGGTTTGGTGTATTGTCACAGAGTACGCAAAGGGTGGG
TCTCTTAAGAATTTCTTGAGCAAGAGGCAGAACAGGTCTGTTCCGCTGAAGTTGGCAGTT
AAGCAGGCATTGGATGTTGCACGTGGCATGGCCTATGTCCATGGCCTTGGGTTCATTCAC
AGAGACCTGAAGTCAGACAACCTCCTGATTTCTGGTGATAAGTCCATTAAGATTGCTGAC
TTTGGAGTGGCTAGGATTGAAGTCAAGACTGAGGGGATGACACCTGAAACTGGAACATAC
CGATGGATGGCTCCGGTTGGCAATGCAACACCAAGAAGACATGGGGCAATATGGGACGAA
GGAAGATTTTGTTCCATTTGGTTCCACGAATTGGGCCCAACCTTGCAGAACTGA

Peptide Sequence

PEP ID

OQU80100
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:9193716:9197720:1 gene:SORBI_3007G078500 transcript:OQU80100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAQGANFPNFIGAVGGHDDGVNFGGNFCDMAFYQKLGEGSNMSVDSINSMQTSMHGGSIA
SSICSNSDSRTGMLGHPGLKGPVIVGSYSVGHSIFRPGRVSHALSEDALAHALMDNKFPT
ETLKDYEEWTIDLGNLHMGMAFAQGAFGKLYRGTYNGMDVAIKLLERPEADPEKAQLLEQ
QFVQEVMMLATLRHPNIVKFIGACRKPLVWCIVTEYAKGGSLKNFLSKRQNRSVPLKLAV
KQALDVARGMAYVHGLGFIHRDLKSDNLLISGDKSIKIADFGVARIEVKTEGMTPETGTY
RWMAPVGNATPRRHGAIWDEGRFCSIWFHELGPTLQN

Transcript Sequence

Transcript ID

OQU80100
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:9193716:9197720:1 gene:SORBI_3007G078500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTCCCTCGACTCCCACCCCCACCCCACTCTCGCTCCCTCCTGCCCTGCCTTTGTTGGATC
TTTTCCCCTCTCGTCTCACATTCCCCTCGCCTAGTTCCACCCCCACCCACCGGTCAGGTC
ACCGCCCGCCCCCGTCGTCGCCCCGCCGGGGGCTCCTCACCATCCCGACGCCGCACCCGC
ACCCGCACCCGCACCCGCATCGCATCACCGCCTGCTCCCACCGTCCGTCCTCCTCGATCG
CTGGTACCTTGGCGCCACGCGGCTCCGACCTCGTCCTGTCCTCCTCCATCCACTGCCATC
GGCATCGGCGGCGGCGAAGTCTTCTTCCCGGCCATCTTCTCAAAGGGTGAGTGCTCTCCC
TTCCCCGCGCACAGGGCCGCGTTCTCCCTTCCTCCTGGTCCTGGGGGGGTCCATCCACCA
CGGTCGGTCGAGTGTGGCGGGCTAGCGACGTCGATTACCACCGTGGTCTGCTCTCCGGGA
CTACGGGTGGGGCTCGCTTTGATTCGGGCTCTCGTTCATGCTGCCTTGGGGACGGGGAGT
CGGTTTCAGGTACATGTCTGGGGCGTTCGATTTGGCTCATGGAAAGGGTCTGTAGCCGCA
TGTTCGGTGCCCAGATTGCCATTTTAGGGGCAATTCGTTAGGGATTTGGGGGGTTACCTC
TTCTGTACGCCGTCGAATTTTTTTTTTCCGCTTCTGGTGTTGCTATAGGTTTCCGATTCC
CTTGTGTGTGTGCGTGTGTGTGCGCTTGCACGTTGTTGGCGGTGGCTGTGGTGGGGATTC
TAGCTCTTGCTATGGAAAGATACAGCAGTATTATCTCTATCTATATCAGTGTAGTGCTTA
TCCAGAGAAGAGGACACAAAAGACACTTGTGCCCTCACTTTATTTCCCTAATCAGAGGCT
ATTAACGACATGAAACATGATTAATGGTTGTGGTTGGTTGATGAATGGAAAGTATTTAAT
GCAAAGACTGGTTTGTGTCCCCTAGAATCCATTATATTTGAGTAGAGTTTCTGGGTGCTT
GCTTGTATGCGCTATATTATACCGCCTCCATTCCAAATTATAAGCCATTTTATCTTTTTT
TTAGATACATCACTTTTGATATACACTGTGTCTAGGTACATGTAAAAGCGATGTATCTAG
AAAAGTGAAAATGTCTTATAACTTGGAATGGAGGAAGTATATATGCATTTCTAGTCTTTG
TTGGTGGGTTGGGTTCCTTCCTTAAATAGTAATTCTGGGATGGATGATTTTGTTTATGGT
TCTATCTTGATGGCAGTGGAAATGGAAACCTTTGTGTCCTGTAGGAATGGAATCGTGTCT
TGTATGAATGGAATCTTCAATCCTCTGCCTTTGCTCGGCCTGTATCTAGTAGAGGACTAA
TTTGCCCCTTGTTTCTGACCTCAGATTTATTCCGTGGTTGCAGGTAATCAATTGCCAGGC
TTTTGATGGCACAAGGCGCCAACTTTCCAAACTTCATCGGCGCCGTGGGTGGCCATGATG
ATGGCGTGAACTTTGGCGGGAACTTCTGTGACATGGCCTTCTACCAGAAGCTAGGGGAGG
GCTCCAACATGTCTGTTGATAGCATCAACAGCATGCAGACCAGCATGCATGGTGGATCCA
TCGCCAGCAGCATTTGCTCTAACAGTGACTCCCGCACTGGCATGCTTGGCCATCCTGGTC
TCAAGGGGCCTGTCATTGTGGGAAGCTACTCAGTTGGGCACAGCATCTTCCGCCCTGGCC
GGGTGTCCCATGCCTTGAGTGAGGATGCACTGGCACATGCTCTGATGGACAACAAGTTCC
CAACTGAAACGCTAAAGGATTATGAGGAGTGGACTATTGATCTGGGGAACCTGCACATGG
GCATGGCCTTTGCACAAGGTGCCTTTGGGAAGCTCTACAGGGGAACATACAATGGGATGG
ATGTTGCTATTAAGCTTTTGGAGCGACCTGAGGCTGACCCTGAGAAAGCTCAACTGTTGG
AGCAGCAGTTTGTCCAAGAAGTTATGATGCTTGCAACTCTGAGGCACCCGAATATTGTCA
AATTCATTGGTGCGTGCAGGAAGCCATTGGTTTGGTGTATTGTCACAGAGTACGCAAAGG
GTGGGTCTCTTAAGAATTTCTTGAGCAAGAGGCAGAACAGGTCTGTTCCGCTGAAGTTGG
CAGTTAAGCAGGCATTGGATGTTGCACGTGGCATGGCCTATGTCCATGGCCTTGGGTTCA
TTCACAGAGACCTGAAGTCAGACAACCTCCTGATTTCTGGTGATAAGTCCATTAAGATTG
CTGACTTTGGAGTGGCTAGGATTGAAGTCAAGACTGAGGGGATGACACCTGAAACTGGAA
CATACCGATGGATGGCTCCGGTTGGCAATGCAACACCAAGAAGACATGGGGCAATATGGG
ACGAAGGAAGATTTTGTTCCATTTGGTTCCACGAATTGGGCCCAACCTTGCAGAACTGAA
ATGGGCAGAGTCTAGAAGAGGTGGAGCAATATCGGACAAAGGAAGCTTTGGTCGTGGTTC
CATGAATTGGGCCCCCCCAACAATGAACATGGTCCTTGCCATGGTGACGGCGACGATGGC
TGGAAAGGAGAAGCCGAACGAAAGATGGGCATATCGCTTGCACGGTGGATAGCTAGATGT
GTAAATCATTGGCAACTTCCATTTCTTTTGCAATCAAACATGATCCAAAATTTTCATGTG
ATTGCTATTTTGTAATTCCTTTGCAACCAAACGCAATAATTGGTATCGGGGAGCCTTATG
GTGGCATTTAGCACCAGATGGGTGGGGCATGTATCTAATCACGATTAAAAACGTGGATGC
ATCGGACCTTGTTCC