Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU80050
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:7882997:7889445:1 gene:SORBI_3007G071200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAGGCAGCACACTGGTAAACGTCCCCGCCAACACAGGGAATATGAAAGAGAAGAAAGG
AAGGACCAACACAAGAGGCCATTTCCCCATGCTCAGGAAAGCTCTAATAATGATGGATTG
GTTCTTTACCGTATACTCTGTCCAGACAGTTTGATTGGTAGTGTCATAGGAAAGAATGGC
AATGTGATAAATGCTATCCGGCAACAGACAAGTGCCAAAGTCAAGGTTGTTGACCCGTAC
CCTGGTGCAGACAAAAGGGTTATCTTGGTATATTGCTACGTCAAGCATAGAGACCTTGAT
GCTGAGGTTGATGACAATGAGCCTGTTTGTGCAGCTCAAGATGCATTACTTAGGGTGCAC
AATGCAATTGTTGATACATTACATAGGAATCGTAGAGACTCTGATAAGAAGAATACAGAG
GAAGCTAACATTCTTGTGCCAGCTAGTCAGGCGTCAAATGTTATAGGAAAATCTGGTGCT
GTCATCAAACATCTTCGGTCAACATCAAGAGCATTCATTAAAGTGAGCCCAAAAGATCCA
AGTGACGCTACACATTCATGTGCTATGAGTTTTGATAATTTTGTTCAGATAACTGGTGGT
GCTGAAGCTGTTAAAAAAGCACTATTTGGAGTATCAACCATCATCTACAAGCACCCATCA
AAAGAGAACATTCCTCTTGAAACTTCCATTCCTGAGCCTACTCCAAGCATTATAATCCCT
TCTGAACTTCCTGTCTATCCAGCTAGTAACTTTTACTCGGCCCCAGATGCTGCTATACCT
TCTGTACATCCAAGCCTGTCTATCTTAGGGTCAACACATCATGTTCCTGAACTTGCTCTA
CCTGCCGATGATCATGGTCGACTGCCTATTTATCCATCTATTCTTCCAGTTATTCCTACT
TATAGTGCCCCAAAATGTTCAGGAGAACTTGAATTTCGTGTTTTATGCCCTAGTGGCAAA
ATTGGCTTGGTTATTGGTAGAGGTGGGGCTACCATAAAGAATATAAGGCAAGAAAGTGGT
GCAAGGATAGATGTTGATGATGCAAAGAATGACAGGGAGGAAAGTATCATTACCATTACA
TCCACTGAGGCCATCGATGATGTTAAATCTGCCGCTGTGGAAGCTGTTTTGCTGCTTCAA
GCCAAGATCAATGATTATGAGGATGATAGAATGAATCTTCGCCTTCTTGTCCCAAATAAG
GTTATAGGCTGTCTTATTGGCAGGGGTGGTTCAATAGTCAATGACATGAGGAAGAAGACT
AAGGCAAACATCCTCATTTCGAAGGGCGATAAGCCCCGGAGAGCATCTTCCAGTGACGAA
CTTGTTGAGGTATCTGGAGAAGCAGACAAGCTGCGTGATGCTCTTGTTCAGATAATTTTG
AGACTTAGGGAAGATGTTCTGAAAGAGAGTGTTGAAAGCCAAAATTCTGACAGGGATGGC
AAGCTAACTGTTGCCACCTCTGATTCCTTATATGGAAGCAGTCTTTCTTTGCCTGCATTA
TTACCTCACAACCCACAAATTGCCCCCTTGAGCTATGATAGAAGAGGTGAATCTGAGAGA
GCTCTGGAAGTATTCCCTCGTACCAGTTCATATGGGTATAGCTCCATGCAGGTCACTGAT
GATGGCTACGGTGGACTTCCATCATATACATCAAAGGCATATGAAGAACATCTACCACGT
GACGAAATGACTATCCCTGCTAGTGGTCTGTCAAAAGTAATGGGAAAACGTGGCACAAAT
TTGGACAACATTAGAAAGATTTCTGGAGCTCACATTGAAATTATTGAATCAAAATCCTCT
CGTCATGACCATATTGCTTACATATCTGGAACCTCTGAACAGAGGCAGTCAGCTGAGAAT
TTGATCAAAGCTTTCATAATGTCTACCTAG

Peptide Sequence

PEP ID

OQU80050
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:7882997:7889445:1 gene:SORBI_3007G071200 transcript:OQU80050 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MRQHTGKRPRQHREYEREERKDQHKRPFPHAQESSNNDGLVLYRILCPDSLIGSVIGKNG
NVINAIRQQTSAKVKVVDPYPGADKRVILVYCYVKHRDLDAEVDDNEPVCAAQDALLRVH
NAIVDTLHRNRRDSDKKNTEEANILVPASQASNVIGKSGAVIKHLRSTSRAFIKVSPKDP
SDATHSCAMSFDNFVQITGGAEAVKKALFGVSTIIYKHPSKENIPLETSIPEPTPSIIIP
SELPVYPASNFYSAPDAAIPSVHPSLSILGSTHHVPELALPADDHGRLPIYPSILPVIPT
YSAPKCSGELEFRVLCPSGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDREESIITIT
STEAIDDVKSAAVEAVLLLQAKINDYEDDRMNLRLLVPNKVIGCLIGRGGSIVNDMRKKT
KANILISKGDKPRRASSSDELVEVSGEADKLRDALVQIILRLREDVLKESVESQNSDRDG
KLTVATSDSLYGSSLSLPALLPHNPQIAPLSYDRRGESERALEVFPRTSSYGYSSMQVTD
DGYGGLPSYTSKAYEEHLPRDEMTIPASGLSKVMGKRGTNLDNIRKISGAHIEIIESKSS
RHDHIAYISGTSEQRQSAENLIKAFIMST

Transcript Sequence

Transcript ID

OQU80050
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:7882997:7889445:1 gene:SORBI_3007G071200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CACCTCGACGACTAGACCGCCGGCGAGCGGCGACGGCTGCTCCCTCCTCCCTCTCCCCGT
CCCCGTCCCTCTGCCGCGGATCCTCCCCTCGCCGCCGCTCTCCGCGCGGGCGCGGACGGC
CGGACGATTCCTTCCGTGCACCTCTGGTAATAACGAACCCTATACCTCGCTTGGGCGGAT
TGGTCGTTTGCCTGGTCCCCTTGTCCGAACTATCGGCGCCTGGTCCCGTCGTCCCCGTTG
TCAATCGATTCCGAATCTCTTTTTCTTCCACCCAAGAGAATTTTGCCCACCTCCTTCTCT
GCGTGGCGGCGCGCGCTGCTGATTCGTCCAGTCTGTACATCGTGCTTCGTGCTTCGAGTA
GATTAGGTTGTTCTTCGTCTCCTTCGTCGCCGCGACAGATTGTGGTATCGGCACCCATGC
GAGTTCTCAGTGCCCCCCCTTGGACAAGTCGCAGTGTCCTGTGCTATGTGCCGAATTCTC
GCCGTGTACTCTGACTGTGAGCCTAGGTTTCCTCCCGTGCTGTGCTATAATTCGGAGCCT
GGCCGACCCGACCGATTCTTTTTTTGTGCTCTTGGTTAAAGACCCTATTAGCTTATATGT
GCATTGTGGCCTATTCATGTGGTTTGTGTGATACCATCCTTGCCTGTGAACTGTGATGAT
TTGGCGTCAAACCTAGCCGGTTAGCCCATACATGTGTTCCGCGCGGGAACGCTTCACCTA
CAACCGTTTTATGTACAACAGCCATGCATCTATGCACTTTCCATCTAGGTGATCTTAACC
ATTGGGGCCTGTGTCCTACTCACTCAGATGGTTACACTCTTTTGTGTGCTTCCTTGTTCT
GATTTGCGCCATCGATGACCGAATCTAGTTTCGTTGTCGTTTTGTTGTTTAGTTCCTTGT
CGTGTTTCGCCTTGTTGGTTTGGTTATTACTGGGTTGGAGAGCTCTAGTAAGTAGAAACA
AATGTCACATCCCTTGTGGCTGCATTGGGCCAAGTTGTTGATATGTATAATTCTGCCTTG
TTAGATTATTCTCTGTGGTGCCTTAGTACAAAATCATACACCTGTTACTGTTGGTATGTT
AAAACGGATTGGTTGATCTGTTGTACTTGTAGTTTGGCTGCTATATTCTAATTGGCTATG
TCTATTTTTTGGTGATATCCCCCTACAATATTTTTTTCTACGATCACAGTGGTTATGTCG
TGTACAATTGTACCTTTCCCTGTTGGAATTTGGATTCCCTTTTTCAGAAAACGTTCAATT
GTTAGACGTTTATCCGGCATCTGTGTAAAGCTTTGCATGAATCTTATGATTTGTTTCCTT
ACACAGTTAACTAAACAATGAGGCAGCACACTGGTAAACGTCCCCGCCAACACAGGGAAT
ATGAAAGAGAAGAAAGGAAGGACCAACACAAGAGGCCATTTCCCCATGCTCAGGAAAGCT
CTAATAATGATGGATTGGTTCTTTACCGTATACTCTGTCCAGACAGTTTGATTGGTAGTG
TCATAGGAAAGAATGGCAATGTGATAAATGCTATCCGGCAACAGACAAGTGCCAAAGTCA
AGGTTGTTGACCCGTACCCTGGTGCAGACAAAAGGGTTATCTTGGTATATTGCTACGTCA
AGCATAGAGACCTTGATGCTGAGGTTGATGACAATGAGCCTGTTTGTGCAGCTCAAGATG
CATTACTTAGGGTGCACAATGCAATTGTTGATACATTACATAGGAATCGTAGAGACTCTG
ATAAGAAGAATACAGAGGAAGCTAACATTCTTGTGCCAGCTAGTCAGGCGTCAAATGTTA
TAGGAAAATCTGGTGCTGTCATCAAACATCTTCGGTCAACATCAAGAGCATTCATTAAAG
TGAGCCCAAAAGATCCAAGTGACGCTACACATTCATGTGCTATGAGTTTTGATAATTTTG
TTCAGATAACTGGTGGTGCTGAAGCTGTTAAAAAAGCACTATTTGGAGTATCAACCATCA
TCTACAAGCACCCATCAAAAGAGAACATTCCTCTTGAAACTTCCATTCCTGAGCCTACTC
CAAGCATTATAATCCCTTCTGAACTTCCTGTCTATCCAGCTAGTAACTTTTACTCGGCCC
CAGATGCTGCTATACCTTCTGTACATCCAAGCCTGTCTATCTTAGGGTCAACACATCATG
TTCCTGAACTTGCTCTACCTGCCGATGATCATGGTCGACTGCCTATTTATCCATCTATTC
TTCCAGTTATTCCTACTTATAGTGCCCCAAAATGTTCAGGAGAACTTGAATTTCGTGTTT
TATGCCCTAGTGGCAAAATTGGCTTGGTTATTGGTAGAGGTGGGGCTACCATAAAGAATA
TAAGGCAAGAAAGTGGTGCAAGGATAGATGTTGATGATGCAAAGAATGACAGGGAGGAAA
GTATCATTACCATTACATCCACTGAGGCCATCGATGATGTTAAATCTGCCGCTGTGGAAG
CTGTTTTGCTGCTTCAAGCCAAGATCAATGATTATGAGGATGATAGAATGAATCTTCGCC
TTCTTGTCCCAAATAAGGTTATAGGCTGTCTTATTGGCAGGGGTGGTTCAATAGTCAATG
ACATGAGGAAGAAGACTAAGGCAAACATCCTCATTTCGAAGGGCGATAAGCCCCGGAGAG
CATCTTCCAGTGACGAACTTGTTGAGGTATCTGGAGAAGCAGACAAGCTGCGTGATGCTC
TTGTTCAGATAATTTTGAGACTTAGGGAAGATGTTCTGAAAGAGAGTGTTGAAAGCCAAA
ATTCTGACAGGGATGGCAAGCTAACTGTTGCCACCTCTGATTCCTTATATGGAAGCAGTC
TTTCTTTGCCTGCATTATTACCTCACAACCCACAAATTGCCCCCTTGAGCTATGATAGAA
GAGGTGAATCTGAGAGAGCTCTGGAAGTATTCCCTCGTACCAGTTCATATGGGTATAGCT
CCATGCAGGTCACTGATGATGGCTACGGTGGACTTCCATCATATACATCAAAGGCATATG
AAGAACATCTACCACGTGACGAAATGACTATCCCTGCTAGTGGTCTGTCAAAAGTAATGG
GAAAACGTGGCACAAATTTGGACAACATTAGAAAGATTTCTGGAGCTCACATTGAAATTA
TTGAATCAAAATCCTCTCGTCATGACCATATTGCTTACATATCTGGAACCTCTGAACAGA
GGCAGTCAGCTGAGAATTTGATCAAAGCTTTCATAATGTCTACCTAGGATTCCTTCTGTT
ATCTGAGAACATCATCTCATCAGTTTGATCTCTTTTGACTTCTGCCATCCTTAGTTCCCC
AGGGTTTGTGAAGAACATTGAATGCAGTGTTTCCTCCACCTGTCCAATTTCCTGAGAATA
TCATGCATATCTGAGCAAGGTGTACTCCAGTAGTAGACAAGGCACTCATTGTTCCTTAGC
TCTTCAACTGTTACCTATTTGTGTTGACATAGTCATCATAACTCACATGTCTTACTCTTC
GTTATCTCAATGACCAGTCCAGTTGCTGCTTACCGATATCTCTTTCAGTTTTTTCCTGTC
AATACTGAGTTGATTATTCCTTCACAACTAATAGTAGAGGGGCCTGTTTCCCAATCTCAA
TGTCTGATTCACTTTCTGCCTAGTGTAGCTCTTGTAATTTCATCCTGTCTGACTGCTATC
TGATTCGTTAGGTTAATAGTACCAAGTGGCCCTCTTTGGAATCTGAGAATAACCCTTTCG
TGCAAGGCTTGTCCAAAACTCCTTGAGATTCCTGTGTTCCAAACATTCTTTGGAATGTGA
GGTTCTGGGTGAATGCGGCTGATTCAGTTGGTGCTTAGTGTAGTTTTCGTAGTTCTGCCC
TGCCTATGCTGCTAGCTGTGACCTTAGAGCGGGGTTTGTTCCTTGTCAATCTGACTGGTT
CACCCATTGCTTGTTTCGGTTCTTATAATTTTGTCATGTCAATACCTGATTCTTTTATCA
TTGGTTCCAAAGAGTTCCTTGTATTTCTGCTAACTCTGATGAGGACCATATAAGTTCTTT
GAAAACTTGCCGGGAAACCCTAGACTTTTAGAAGCAACCATGTACATAAGCTTATTAAAG
TTCTTGGATCACAATATGCAGAACAACTTTTTTGTATCATTCTGCAAGTATCTGTGACCA
TCGTTGGTGGATGTCTAGAGAACCATTCTAACATTTCAGCTGTCTGAAAAACTGCCTATT
GAAATATTCTAACATCCTATGCTGCTACCACCTTAGATGGGAATTCTTCCTGCCCAGCTT
TGTCATGTCAGTAGTTGCCTCATTCTTCCATCATCAGGTTCGAAAGAGTTGCATGTTTTT
CTGCAGTAATTAATTCTACTGTGGAACCATATATTAATATAAGTTCTTTCCAAAACCTTC
ATGGTAACCATACATTATTCAGAAGCATCTATCCCAAAAAGTCCCTGAAACCCTCTATCA
AAGTAAAATTCGCCCCATCCTTCACCTGTGCAGTTACCCTTTATGCATTTTGTGATAACA
ATCAATTATGACACCATCAAGTGTAAATGTTGTAGTGTGTCATAATGTCTGTTAACAAAT
TGTACTAGAGTTTGTTGTTTTGTTAACAGCTGTTGTGGTTGCTCTGAGCTGTCTTCTGTA
AATAATGAGCGTCATGTTGAAATTTTGTAGTGAAGTAGAATGCCATGACTTTTTCCCCCA
GCCATTGGGAATTATGAGATGTGCATATGTTACAATAGAATCCTATGTGCTGCTTGGTTA
TCTCTTGCATTTGTGAATGGTATAAATCTACTGCTGTTCTGCATGTGTATTGGTAAAAAT
CAAGGTGATGTCTTGAGATTTCTTT