Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU80029
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:7556509:7559823:1 gene:SORBI_3007G067900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAAGGCTGATCTCGAGCATGAGAAAAAGAACCGGAGGCAGTTGGAGACTATTAACTTC
AAGCTTGTTGATGAGTTGAAAGAGGTCAAAATGGCCGCAAAGCAGCTATTGCAGGAGTAT
GACAATGAGCAGAAGACACGGGAACTCACAGAGGAGGTGTGCAACAAGCTAGTGAGGGAG
ATAGAGGAACACAAGTCAGAGATCGAAGCCTTGAAACAGGATTCTGTCAAACTGCGGGGT
GAGCTGGATGAGGATAGGAAATTGCTACAGATGGCTGAGGTGTGGCGTGAGGAGCGAGTG
CAGATGAAACTTGTCGATGCCAAGCTCACTCTTGAGGCCAAATATGAACAGTTGAGCAAA
CTGCAGGAGGATGTGGAGGCTTGCATTTCGACTTTTAGCTCTTCCAAAGGAGACAGCACA
ATTGTTGAAGCGGCACACAACATTGTACAGGCCATTGAGTCGGCCAGAGACCAAGAGGTT
GAATTCACGTATGAGCCTCCAAGAGCATCAGAAGATATATTGGCCATCTTTGAAGAGCTA
CGCCCAAGTGAAGAGATGGAGACAAAGGAAACTGAACCATGCCTGAAGCAAGAAATCCAA
GAAGCTAGCCCAACAGCTGATATATTTCTGGAAAATCGGGACAAATTGTTCCCAGATGAA
ATACATTCTGATGAGAGTGATACAGAAGACGGAAGCAGCTGGGAGACTATGAGCCATGAA
GAGATGCATGGTTCAAGCCACTCACCATATGGAAGCGAACCTTCAGTCAACAAGATCTTT
GACAGAATTTCATGGACCAGTGGAAACGATTCTGAGGGTGAGCAGACCAACAAACTGTGT
GATGACTTGAGCAATTTGTACCTGACGGACATGAAACAGTCCAAGAAGAAAGAGTCTGCC
ATATCAAAGCTGTGGAAGTCATCTCCACTGAAAAACTGTGAACTCCGTACAAAAGATGTT
CCGGAGATGACAAATGCGAGATTATCAAGTGCAAGTCTTCCAAATGGTGTGTACTCTACC
ACCAGAGGCTCAAATCTAGATATGGGAGACAGCACCCCTAGCACAGCGCAATGGAGCTCA
CCGGACTCAATGAACAGCCAGCTCAATCGGGGTTTCAGAGGCTGCATGGAGATGGTTCAG
AGGCAGAGCCTGAAGGCAAAGCTCCTAGAAGCTCGGATGGAGAGCCAGAAGATTCAGCTC
CGTCATGTGCTCAACCAGAAAACCTAA

Peptide Sequence

PEP ID

OQU80029
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:7556509:7559823:1 gene:SORBI_3007G067900 transcript:OQU80029 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MKADLEHEKKNRRQLETINFKLVDELKEVKMAAKQLLQEYDNEQKTRELTEEVCNKLVRE
IEEHKSEIEALKQDSVKLRGELDEDRKLLQMAEVWREERVQMKLVDAKLTLEAKYEQLSK
LQEDVEACISTFSSSKGDSTIVEAAHNIVQAIESARDQEVEFTYEPPRASEDILAIFEEL
RPSEEMETKETEPCLKQEIQEASPTADIFLENRDKLFPDEIHSDESDTEDGSSWETMSHE
EMHGSSHSPYGSEPSVNKIFDRISWTSGNDSEGEQTNKLCDDLSNLYLTDMKQSKKKESA
ISKLWKSSPLKNCELRTKDVPEMTNARLSSASLPNGVYSTTRGSNLDMGDSTPSTAQWSS
PDSMNSQLNRGFRGCMEMVQRQSLKAKLLEARMESQKIQLRHVLNQKT

Transcript Sequence

Transcript ID

OQU80029
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:7556509:7559823:1 gene:SORBI_3007G067900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCGCGCTCGTCCGTTAGAAGGGGGAAAAAAAAGGAAAGTTCGAATTTTTAAGCTCGAATC
AAGATGCTCCCGCTCGAATGTTGCTGGATCCTCGCTCGGATTCGGCGTACGGGGAGGCGA
ATCCAGGACGGCGGGCGGCGACGCCCTCCCTCATCAAGCCGCCGTACTCGCCTGCCCACC
GTACTACTCCGCTCTCGAGCCTCCTTCCCGATCCGTTCCAGCTCGTGGCGGCAAGCAGTT
ACTAGCCGTTGCGGCGTCGGCGTCGCACGGCGGCGGAATCGCAGCCCAGATCCCCATTTA
TGGCGGCGCCCCTTCTCATTGCTCTCTCTCTCTCTCTTTTATATAAAATCGCGCCCGTCT
CCAGTGTCGGCGGGTGGCATTTATTGCTCAGGCCATGGGCGCGTTCCTTGTGATGCACAT
AGCCCAATCCCCCGCTCATGTGATCTGCTCCTAGCTCATTGAATCAACGGTGTGCCGTGC
AATTAAGCACGCACGGATGTACCTCTAGGGTTCTTGATGTGAGAGTAACCAGCCTGTCTC
CTCCAGCTACCCCTGTTTGTAGTGCGTGAGTGCCTTGGCTATTTACTGGAGTCACTACTG
CTACCTTGCCAAGTGATATTCGGTGTAAACTCGGTCATGTGTTCAGTTTCCACTTGAGTG
AGTTACCCTTCCCGGTTGCAATGCCAGTATGCCACTGCCATTCATAGCATGAGCAATAGA
TCCTGGTTTCAGAAGATGGTATGGGGTTTCATACAGCTCTGTTGTTTGTTATTCACCCTA
TTTGCTGATAGGATCTGAATGATCCAGTGTTCCTCTCACTCAGTAGTGGTGTCACCCCAA
ATTTATAGGTGCAATCTCGTGACCAGTTCATTTTCATTCTCTGTCTCCTTTTCTTGAGAT
CTTTGCTTTGTCATTATGAAGAAATTACTTTAGGCTGTAACTTCGAGGATGGGTAAATCT
GAGAGTGCTATGAAACAGTTAGCCATGTATTAATGTAACTTCAAGGATGGGTCAATCAGA
TGGAACAAATGCTTTTTTTTTCTGCTTTGTGGCAGTCTATTGATCATTCATATTAACTTG
TTGATTTCACTTATATGACAGCATATACCGAGACATCTACAAGCTCACCTTCTGAGCAAG
AATCCTCTTAGTTGCCACCATAGTCTGAAAAAAGATGTTTCAAGCCCCAACTCTGTCCTG
GAGCCACATAGTGGAGAGCTCCACAAGGTATAACCAGAAATTGCTTGCACCTAAATTGCT
TCTATCCTTTTTGGTCCATACTGCAAGCTAATTCAGTGGATTTAACCATGCAGGTACATC
TTCGTCTTTCCTCCGGTGTGGAGGGTGCAACAAAATGGGAGCCTATAAACATAAAGAGCA
TAGAACCAGATGGTGCCTATGTGATTGCTAGCCAACTAAATCTCGTTGAGGAGCAAGGGG
GCAGCTATGTTGCTAGCCTTGAGTTGGAGCTTCAGCAGGCACGGGATAGGGTGAGCAAGC
TAGAAGCTGAGCGGCTTTCAGCCAAGAAGCAACTTGATCACTTGTTCAAGAAACTCACAG
AGGAGAAAGCAGCTTGGCGGAACAGAGAGCACAAGAAAGTTCGAGCCATTCTTGAAGATA
TGAAGGCTGATCTCGAGCATGAGAAAAAGAACCGGAGGCAGTTGGAGACTATTAACTTCA
AGCTTGTTGATGAGTTGAAAGAGGTCAAAATGGCCGCAAAGCAGCTATTGCAGGAGTATG
ACAATGAGCAGAAGACACGGGAACTCACAGAGGAGGTGTGCAACAAGCTAGTGAGGGAGA
TAGAGGAACACAAGTCAGAGATCGAAGCCTTGAAACAGGATTCTGTCAAACTGCGGGGTG
AGCTGGATGAGGATAGGAAATTGCTACAGATGGCTGAGGTGTGGCGTGAGGAGCGAGTGC
AGATGAAACTTGTCGATGCCAAGCTCACTCTTGAGGCCAAATATGAACAGTTGAGCAAAC
TGCAGGAGGATGTGGAGGCTTGCATTTCGACTTTTAGCTCTTCCAAAGGAGACAGCACAA
TTGTTGAAGCGGCACACAACATTGTACAGGCCATTGAGTCGGCCAGAGACCAAGAGGTTG
AATTCACGTATGAGCCTCCAAGAGCATCAGAAGATATATTGGCCATCTTTGAAGAGCTAC
GCCCAAGTGAAGAGATGGAGACAAAGGAAACTGAACCATGCCTGAAGCAAGAAATCCAAG
AAGCTAGCCCAACAGCTGATATATTTCTGGAAAATCGGGACAAATTGTTCCCAGATGAAA
TACATTCTGATGAGAGTGATACAGAAGACGGAAGCAGCTGGGAGACTATGAGCCATGAAG
AGATGCATGGTTCAAGCCACTCACCATATGGAAGCGAACCTTCAGTCAACAAGATCTTTG
ACAGAATTTCATGGACCAGTGGAAACGATTCTGAGGGTGAGCAGACCAACAAACTGTGTG
ATGACTTGAGCAATTTGTACCTGACGGACATGAAACAGTCCAAGAAGAAAGAGTCTGCCA
TATCAAAGCTGTGGAAGTCATCTCCACTGAAAAACTGTGAACTCCGTACAAAAGATGTTC
CGGAGATGACAAATGCGAGATTATCAAGTGCAAGTCTTCCAAATGGTGTGTACTCTACCA
CCAGAGGCTCAAATCTAGATATGGGAGACAGCACCCCTAGCACAGCGCAATGGAGCTCAC
CGGACTCAATGAACAGCCAGCTCAATCGGGGTTTCAGAGGCTGCATGGAGATGGTTCAGA
GGCAGAGCCTGAAGGCAAAGCTCCTAGAAGCTCGGATGGAGAGCCAGAAGATTCAGCTCC
GTCATGTGCTCAACCAGAAAACCTAAGTTAGAACCTCACTCTGCGGCAATAAATAAAATT
CCAAGCATTGGATCTATTTCATTTCCCTTGTCCATTGTAGTATGTAGCTTAGTCTCATGT
GCTTCTGCTTCATATCATAGAACTATATAGCTAGCTGTAGCCTTGTAGGCTGACCCGGCC
ATGGTTGATGCATCTGTCTAAACAAGAAGCACCGTTCAGACTAACTGTACCAGTAATGTA
GCAGCAAACCAGAAGCATTGTTCAGACAAAATGTACCACTGGCAGTGAAGAATTGTAAAA
CCTCTGAGAATGTGTTTTCATTTGAAGCGAACAAGATACTCCGAAATGGAAACCTCTTCA
GAAACTGCTGTCATGGAGGCCATAGGAATTCTGATTCTAAAATGAAATTTAAGCTAGAAA
CAGTTTGCGAAGTTAAAACACAAAATGTGTCAGTTTTAGTTACAATAGCCACAACAGATC
AAAATGTGTCAGTTT