Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU79867
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:3730799:3733347:1 gene:SORBI_3007G038432 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTCCTCTCGAGCGTGGTGCAATGGTGGCAAGAGTTGCAGCTATGCATCCTTGTCTTA
GGCAGCCTTGGCGTTCAGTGCTACCTCGCCTTATTTGCCAGTGCCCGTAAGAAGCATAGC
AGGCCCTTGTTCAGATTCAGCATCTGGCTGGCCTACCTAGGCGGCGACGCTCTTGCTATA
TATGCCCTTGCAATCCTCTTTAATAGACAAAGAAAGCTGCAGTACAGTTCTACAAATGGC
AGCCATGTCCTAGAAGTGTTATGGGCCCCTATCTTGCTCTGGCACCTTGGTGGGCGGATC
AACATATCTGCTTACAACATCGAAGACAACGAACTATGGAGCCGTCACCTTCTAACTACT
GTGTCTCAGGTCACCGTGGCCATCTATGTGTTTTGCAAGTCATGGTCATCCTCTGCTGAT
AAGAGGTTACTAGCTGCAGCAATTCTGCTTTTCGTCATTGGTGTTTTCAAATGCTTTGGT
AAGCCCTTGGCTCTGAAGAGGGCTAGCTTTAATACCATAGCCAGCACTTTCCATCCTGCT
CCATGGTCAGAAAGTACAAGAAGAGAATTGGAGCTTGAGGAGTACATACAAGAAGCAAGG
AGCTTTGTGCAATGTAACCAAGATCCCCCAAGATTGGAGTCTGATGAACAGAAAAAATTC
TTGGAGGAACTCTCTATACCTGACAAGCTATTTGTCGACTATGCATATGTGTATCATGAC
CGTTTGGCTCGCATGAAATCCTTCTGGTTACTGGACAGTGGAACCACTTATAAGGCTCTA
AGTCAAGGGCTCTCCAACACTTTCGATCTTATCTATAGCAAGTTATCTCAATGGGATGAT
AAGAATAGAACTACACCTGATTGTAGTAATATATGTTCTGGCTTGAATATGTTCATATTT
TATCCACTGTTGCCGATTGTGCCCATCGCCTTCTTCCACGCCAGCCAAAAACAAGCATAT
AGGAGAAGCGACATCAAGGTTACATTTATATTACTATACATCACATACCTTTTGGAGCTC
TTGTCTTTCATCACACAAGCAATTCATTTCAAAGAATGGTCACATGGGGTTGCTCAACGT
AGTCTTGTAGGATTGCTAGCTTGGAACAGAAAGCATGCAAGACTAATGGGCATCGCGGAA
TTCTTTCAATACAAAGGTTTGCTATACACATATTTTAGCCTCAAGCCTTGTCACTCGTCC
AAAGATATTACAATGTTAGTTTGTGAACATGCTAAGTCTGGATGGGTGAATCATATAACA
AATATTGAGAGTTACTGGAGATTCACTGACAGTAGAGGCCAGTGGGCACTTGAGGGTAGT
GGAAGCGAAGAAATCCTTGGGTGGAGTATAGAGAAGCCCTTCGACGAGAGCATTGTTCTC
TGGCATGTGGCTACAGATTTTTGCTTCTATAGTGAGGACATGACATCTCATGATTCTGAA
TGTGCCAGGATGTGTAGACAAATCTCAAACTACATGATCCATCTGTTGTTTGCTAATCCT
GAGATGTTGTTGCCTGGCAGCAGAAGGAATTTATTCACAGATGCTTATGATGAACTTGAG
GCCATCCTCCGAGGTCATGATGTATCGATGTTGGACGAAAAAGAACTCACTCAAAAGATA
ATTGGTAAGGCAGAGTCAGCAAAAGGAATAATTCGAGACTCATGGGTTCTAGCTCAACAG
TTGATGCGGCTAAGTGAAGAGAAGAAGATGTGGGAAATAATCAAAGGCGTATGGATTGAG
ATGCTCTGTTTTTCTGCTGGTAGATGCAGGGGTTATCTGCATGCCAAGAGCCTAGGCTCT
GGTGGGGAGTACCTCTCCTACGTAACGCTTCTGATGTCGCACGCAGGACTGGAGACATAT
GCCGAGAGGCAGCAGAGGGTGCAGCTTCGGCTTTCCAATGAGGAGAGAGTGAAAATTGCA
AAACAAAGAGTAGAAGAAGCTGCAAACAACCAAGCTACTGCTGGCTCGTCGACTCCACAA
GGCATGGTTCCAGCAAAGGACGAAGAGATTGCTACCACTCCATTGGGTTCTCAAGTCACT
GGGCAACTAGAACAAGAAGAAGATGCTGCTTCTACATCAGCTTCACGAGTCCCTGAGATC
AAGGTTGTTGTCTCACCATAA

Peptide Sequence

PEP ID

OQU79867
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:3730799:3733347:1 gene:SORBI_3007G038432 transcript:OQU79867 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVLSSVVQWWQELQLCILVLGSLGVQCYLALFASARKKHSRPLFRFSIWLAYLGGDALAI
YALAILFNRQRKLQYSSTNGSHVLEVLWAPILLWHLGGRINISAYNIEDNELWSRHLLTT
VSQVTVAIYVFCKSWSSSADKRLLAAAILLFVIGVFKCFGKPLALKRASFNTIASTFHPA
PWSESTRRELELEEYIQEARSFVQCNQDPPRLESDEQKKFLEELSIPDKLFVDYAYVYHD
RLARMKSFWLLDSGTTYKALSQGLSNTFDLIYSKLSQWDDKNRTTPDCSNICSGLNMFIF
YPLLPIVPIAFFHASQKQAYRRSDIKVTFILLYITYLLELLSFITQAIHFKEWSHGVAQR
SLVGLLAWNRKHARLMGIAEFFQYKGLLYTYFSLKPCHSSKDITMLVCEHAKSGWVNHIT
NIESYWRFTDSRGQWALEGSGSEEILGWSIEKPFDESIVLWHVATDFCFYSEDMTSHDSE
CARMCRQISNYMIHLLFANPEMLLPGSRRNLFTDAYDELEAILRGHDVSMLDEKELTQKI
IGKAESAKGIIRDSWVLAQQLMRLSEEKKMWEIIKGVWIEMLCFSAGRCRGYLHAKSLGS
GGEYLSYVTLLMSHAGLETYAERQQRVQLRLSNEERVKIAKQRVEEAANNQATAGSSTPQ
GMVPAKDEEIATTPLGSQVTGQLEQEEDAASTSASRVPEIKVVVSP

Transcript Sequence

Transcript ID

OQU79867
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:3730799:3733347:1 gene:SORBI_3007G038432 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCGGCCTGCCTTGTCCCAGTAAGTTCAACTTGGGATCGATGCTAAGTTGCTAACTCCACG
CATACTTTGGGATATTTAGCCTAGGACGATGACAGTACCGAACCACACACAGACCAAAAA
GAGTGAAACTGAAAGATTAAGCGATTGAGCTAGCAGCAAATGGTCCTCTCGAGCGTGGTG
CAATGGTGGCAAGAGTTGCAGCTATGCATCCTTGTCTTAGGCAGCCTTGGCGTTCAGTGC
TACCTCGCCTTATTTGCCAGTGCCCGTAAGAAGCATAGCAGGCCCTTGTTCAGATTCAGC
ATCTGGCTGGCCTACCTAGGCGGCGACGCTCTTGCTATATATGCCCTTGCAATCCTCTTT
AATAGACAAAGAAAGCTGCAGTACAGTTCTACAAATGGCAGCCATGTCCTAGAAGTGTTA
TGGGCCCCTATCTTGCTCTGGCACCTTGGTGGGCGGATCAACATATCTGCTTACAACATC
GAAGACAACGAACTATGGAGCCGTCACCTTCTAACTACTGTGTCTCAGGTCACCGTGGCC
ATCTATGTGTTTTGCAAGTCATGGTCATCCTCTGCTGATAAGAGGTTACTAGCTGCAGCA
ATTCTGCTTTTCGTCATTGGTGTTTTCAAATGCTTTGGTAAGCCCTTGGCTCTGAAGAGG
GCTAGCTTTAATACCATAGCCAGCACTTTCCATCCTGCTCCATGGTCAGAAAGTACAAGA
AGAGAATTGGAGCTTGAGGAGTACATACAAGAAGCAAGGAGCTTTGTGCAATGTAACCAA
GATCCCCCAAGATTGGAGTCTGATGAACAGAAAAAATTCTTGGAGGAACTCTCTATACCT
GACAAGCTATTTGTCGACTATGCATATGTGTATCATGACCGTTTGGCTCGCATGAAATCC
TTCTGGTTACTGGACAGTGGAACCACTTATAAGGCTCTAAGTCAAGGGCTCTCCAACACT
TTCGATCTTATCTATAGCAAGTTATCTCAATGGGATGATAAGAATAGAACTACACCTGAT
TGTAGTAATATATGTTCTGGCTTGAATATGTTCATATTTTATCCACTGTTGCCGATTGTG
CCCATCGCCTTCTTCCACGCCAGCCAAAAACAAGCATATAGGAGAAGCGACATCAAGGTT
ACATTTATATTACTATACATCACATACCTTTTGGAGCTCTTGTCTTTCATCACACAAGCA
ATTCATTTCAAAGAATGGTCACATGGGGTTGCTCAACGTAGTCTTGTAGGATTGCTAGCT
TGGAACAGAAAGCATGCAAGACTAATGGGCATCGCGGAATTCTTTCAATACAAAGGTTTG
CTATACACATATTTTAGCCTCAAGCCTTGTCACTCGTCCAAAGATATTACAATGTTAGTT
TGTGAACATGCTAAGTCTGGATGGGTGAATCATATAACAAATATTGAGAGTTACTGGAGA
TTCACTGACAGTAGAGGCCAGTGGGCACTTGAGGGTAGTGGAAGCGAAGAAATCCTTGGG
TGGAGTATAGAGAAGCCCTTCGACGAGAGCATTGTTCTCTGGCATGTGGCTACAGATTTT
TGCTTCTATAGTGAGGACATGACATCTCATGATTCTGAATGTGCCAGGATGTGTAGACAA
ATCTCAAACTACATGATCCATCTGTTGTTTGCTAATCCTGAGATGTTGTTGCCTGGCAGC
AGAAGGAATTTATTCACAGATGCTTATGATGAACTTGAGGCCATCCTCCGAGGTCATGAT
GTATCGATGTTGGACGAAAAAGAACTCACTCAAAAGATAATTGGTAAGGCAGAGTCAGCA
AAAGGAATAATTCGAGACTCATGGGTTCTAGCTCAACAGTTGATGCGGCTAAGTGAAGAG
AAGAAGATGTGGGAAATAATCAAAGGCGTATGGATTGAGATGCTCTGTTTTTCTGCTGGT
AGATGCAGGGGTTATCTGCATGCCAAGAGCCTAGGCTCTGGTGGGGAGTACCTCTCCTAC
GTAACGCTTCTGATGTCGCACGCAGGACTGGAGACATATGCCGAGAGGCAGCAGAGGGTG
CAGCTTCGGCTTTCCAATGAGGAGAGAGTGAAAATTGCAAAACAAAGAGTAGAAGAAGCT
GCAAACAACCAAGCTACTGCTGGCTCGTCGACTCCACAAGGCATGGTTCCAGCAAAGGAC
GAAGAGATTGCTACCACTCCATTGGGTTCTCAAGTCACTGGGCAACTAGAACAAGAAGAA
GATGCTGCTTCTACATCAGCTTCACGAGTCCCTGAGATCAAGGTTGTTGTCTCACCATAA
GAGCCATGTCATGTCTTCTTGGTTTGTATATTCCTTTCGATCACACACGCTAACTGCAGC
GTGCCTGTACCATTCCATATCTGGTCATTTTGTTTCGGATCTCAATAGTTGATTTTGCAG
TTTGAACAGTCAAAACTTTC