Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU79790
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:7:1488516:1491886:1 gene:SORBI_3007G017300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGCAGCCCCGGAGCAGGCTGCTCAGCGTCTGCGCCGTCGTCCTGCTCCTCCTCCTC
CTCCTCGCCCCGGGCCTCGCCGCCGCCTTCAACTACGCCGACGCGCTCGCCAAGTCCATC
ATCTACTTCGAGGGCCAGCGCTCCGGCAAGCTGCCCCCCGGCAACCGCATGCCCTGGCGC
GGCGACTCCGGCCTCACCGACGGCGCCCAGCACAACGTGGATCTGGTGGGCGGCTACTAC
GACGCCGGCGACAACATGAAGTTCGGCCTCCCAATGGCGTTCACCACAACAATGCTCGCA
TGGAGCGTAGCCGACTTCGGCAAGTACATGGGCGCCAACCTCCCGCACGCCCGCGCCGCC
GTGCGCTGGGGCGCCGACTACCTCCTCAAGGCCGCGACCTCCACCCCGGGGACACTCTAC
GTCCAGGTAGGCGACCCGGCGCAGGACCACAAGTGCTGGGAGCGGCCGGAGGACATGGAC
ACGCCGCGGGCGGTCTACGCCGTCACCTCCTCCAACCCCGGTTCCGACGTGGCCGCCGAG
ACGGCGGCGGCGTTAGCCGCCTCCGCCGTCGCGTTCCGCCGCGCCGACCCGGGGTACGCG
GCGCGTCTCCTCGGCGCCGCCGTGGTGGCGTTCGAGCTCGCGGACCGGCACCGGGGTTCG
TACAGCCAGGGCACGCTCAGCGCCGCGGTGTGTCCGTTCTACTGCTCCTACTCCGGGTAC
GACGACGAGCTGCTGTGGGCGGCCGCGTGGCTGCACCGCGCGTCCGGGAACGCGACGTTC
ATGGCGTACGTGAGAGCCAACGGCGTCCAGGACGGCGCTGGGAACGACGACTACAGCTTC
AGCTGGGACGACAAGCGGATCGGCACCAAGGTCCTGCTGGCGAGAGGGGTGCTCCGGCGA
GACAGGAGACGGAACGTCCCCGGGCTGCAGCTGTACAAGGCGCACTCCGACAGCTACGTC
TGCTCGCTGGTGCCCGGCGCCGCCGGGTTCCAGGCCGGGCAGTACACTCCCGGCGGGCTC
ATCTACAGGGAAGGCGGCAGCAACATGCAGTACGTGACGACGACGACGTTCCTGCTGCTC
GCGTACGCGAAATACCTCCGGTCAGCCGGCGGCAATGTGGCGTGCGGTGGCGGAGGAGAG
GTGGCGCCGGCGGAGCTGGTGGCGCTGGCGAAGAGATGGCGTTCTTCTGTGCCCCACGGA
GTACAGCAAGTGGTAGAATTTGCTCGATTTTTTTTCCATAACAACATTTTTTAA

Peptide Sequence

PEP ID

OQU79790
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:7:1488516:1491886:1 gene:SORBI_3007G017300 transcript:OQU79790 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEQPRSRLLSVCAVVLLLLLLLAPGLAAAFNYADALAKSIIYFEGQRSGKLPPGNRMPWR
GDSGLTDGAQHNVDLVGGYYDAGDNMKFGLPMAFTTTMLAWSVADFGKYMGANLPHARAA
VRWGADYLLKAATSTPGTLYVQVGDPAQDHKCWERPEDMDTPRAVYAVTSSNPGSDVAAE
TAAALAASAVAFRRADPGYAARLLGAAVVAFELADRHRGSYSQGTLSAAVCPFYCSYSGY
DDELLWAAAWLHRASGNATFMAYVRANGVQDGAGNDDYSFSWDDKRIGTKVLLARGVLRR
DRRRNVPGLQLYKAHSDSYVCSLVPGAAGFQAGQYTPGGLIYREGGSNMQYVTTTTFLLL
AYAKYLRSAGGNVACGGGGEVAPAELVALAKRWRSSVPHGVQQVVEFARFFFHNNIF

Transcript Sequence

Transcript ID

OQU79790
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:7:1488516:1491886:1 gene:SORBI_3007G017300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATCATGTCTCCCAACACCCCGTTTTCTCGCAGCTGATACCGGTCTCGCCACACTAAAAGC
TTCGCTTCCAACTAACATAACCGTCTTTGCCGGCCGCTCCCCTTCTACAAATAGGGATGC
TCCTCCACTCTCACTCCCCCACCACTCTGCTCGGGAGACCCACCACTACCACCCACACTA
CCCCCAACTGTCACAAGCCAGCCAGCCATCAGCCATGGAGCAGCCCCGGAGCAGGCTGCT
CAGCGTCTGCGCCGTCGTCCTGCTCCTCCTCCTCCTCCTCGCCCCGGGCCTCGCCGCCGC
CTTCAACTACGCCGACGCGCTCGCCAAGTCCATCATCTACTTCGAGGGCCAGCGCTCCGG
CAAGCTGCCCCCCGGCAACCGCATGCCCTGGCGCGGCGACTCCGGCCTCACCGACGGCGC
CCAGCACAACGTGGATCTGGTGGGCGGCTACTACGACGCCGGCGACAACATGAAGTTCGG
CCTCCCAATGGCGTTCACCACAACAATGCTCGCATGGAGCGTAGCCGACTTCGGCAAGTA
CATGGGCGCCAACCTCCCGCACGCCCGCGCCGCCGTGCGCTGGGGCGCCGACTACCTCCT
CAAGGCCGCGACCTCCACCCCGGGGACACTCTACGTCCAGGTAGGCGACCCGGCGCAGGA
CCACAAGTGCTGGGAGCGGCCGGAGGACATGGACACGCCGCGGGCGGTCTACGCCGTCAC
CTCCTCCAACCCCGGTTCCGACGTGGCCGCCGAGACGGCGGCGGCGTTAGCCGCCTCCGC
CGTCGCGTTCCGCCGCGCCGACCCGGGGTACGCGGCGCGTCTCCTCGGCGCCGCCGTGGT
GGCGTTCGAGCTCGCGGACCGGCACCGGGGTTCGTACAGCCAGGGCACGCTCAGCGCCGC
GGTGTGTCCGTTCTACTGCTCCTACTCCGGGTACGACGACGAGCTGCTGTGGGCGGCCGC
GTGGCTGCACCGCGCGTCCGGGAACGCGACGTTCATGGCGTACGTGAGAGCCAACGGCGT
CCAGGACGGCGCTGGGAACGACGACTACAGCTTCAGCTGGGACGACAAGCGGATCGGCAC
CAAGGTCCTGCTGGCGAGAGGGGTGCTCCGGCGAGACAGGAGACGGAACGTCCCCGGGCT
GCAGCTGTACAAGGCGCACTCCGACAGCTACGTCTGCTCGCTGGTGCCCGGCGCCGCCGG
GTTCCAGGCCGGGCAGTACACTCCCGGCGGGCTCATCTACAGGGAAGGCGGCAGCAACAT
GCAGTACGTGACGACGACGACGTTCCTGCTGCTCGCGTACGCGAAATACCTCCGGTCAGC
CGGCGGCAATGTGGCGTGCGGTGGCGGAGGAGAGGTGGCGCCGGCGGAGCTGGTGGCGCT
GGCGAAGAGATGGCGTTCTTCTGTGCCCCACGGAGTACAGCAAGTGGTAGAATTTGCTCG
ATTTTTTTTCCATAACAACATTTTTTAAAAGACTGAAAACAGGGGCTGGTCGCGCCACTT
TTGGCCTCAGTTTGTTCTGTTCTGTGCATCTACCCTGTCAACAAGAGGCCGTTCAACAAC
ACAAAACCAGATGCTACCTTCAACTCTAGTTTCATGTAATTGCACAAAGACGCAAAACAT
TGGCTCATCTCGGCATAAATTCTCTCCTGTGAAATAAGGCCAGCAACACTCAATCCATAG
AAGACAGCAAAATAATCACTCTAAACAAAGCTTTCAGAGTTCACAGGCACTTCGTTCATC
AGTTCACTAACACAGGTGCCAGAAGGCAGGAAGCAATATAAGGCTATCACAGAGTTTCAA
GTCACATGCGCTGCATGGTAAAATCAAGTTACTGAAGAAACAGATGGTACAAGCATCGTG
CCATTGCAGACCTTATACTGGAACAAGAACACACGCTCCTATCTCATCTCATTAAGTTAA
CAAATGCTTCACACGGTGATGGGAGTAGAGCGCACATGAGGGCAAAGCTAGTAAGGGCGA
TATCGCCGGCTGTGCCCTTCGCCGCCTCTGCTACTGTCTCTTCGGTCGCCACCCCTCCGT
GGTGGGGGCGGGGGAGGCATTCCACCAGGTTGTTGCCTGTAAA