Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU79639
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:60830698:60835533:-1 gene:SORBI_3008G173800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGTCGGCTGCCGCTTCGGCGGCGGCGGCGCTGGCACGGGCACGGCTCCACGTCCTC
CTCCCCGCGTCGCCTCCCTCCGCCGCCCGGGCATCCTCCGCGCCCACCTCGGCGTCGGCC
TGCTGCGTCCTCCGCTGCGTGGGTAGGACGCCCCGGTACGGGACGAAGAGGAGGAGGCGC
TTCCGGGCGCCGCGCGCGGGGATGGACATGGACCTGGCCAGCGGCGCCGTCGAGGTGATC
AACGACCTGGGCTTCGACACGCTCACCTTCCTCGGCGTCACGGTCCTCGTCGTCCCCGCC
TTCCGCGTCGTCAAGGCCAGCCCAATTCTCGGCTTCTTCTGCGCCGGCGTCGTGCTCAAC
CAGTTCGGCCTCATCAGGAACCTCACCGACGTCAAGCTCCTCTCCGAGTGGGGAATCCTT
TTCCTGCTGTTTGAGATGGGCCTGGAGCTCTCACTCTCTCGCCTCAAGGCTCTTGCCAGG
TACGCCTTTGGGATGGGCTTGCCTCAGGTTCTTTTGTCAACCCTCGCTTTCACGGCGTTC
GAGCTTCCTCCTAATGGCGCCATAGGAACAAAGATATTGCAATTTCTCTTCGATTCAAGA
CCTGATCTGGTGAACATCAGGAGTATTGATGAAGCAATAGTAATTGGAGCTGCGCTCTCA
CTATCTTCATCTGCTTTTGTTCTCCAGCTTCTTGCCGAGAAAGGTGAACTTCCAACAAGA
TTTGGTTCAGCTACACTGGGAATTCTTCTCCTGCAGGACATTGCAGTTGTCCCCCTGTTG
GTCATACTCCCTGTGCTAGAGAGTCAGAATATCGTGGAGCGAAGTTTGTGGCCACTTTTA
CTAGCTGAGAGCTTAAAGGCACTGGGCGGACTTGGCTTACTTTCCCTTGGCGGGAAGTAC
CTCATGAGACGTGTCTTTGAGTTTGTTGCAGAGTCAAGGAGTTCAGAGGCATTTGTTGCG
CTCTGTCTTCTTACAGTCGCAGGGACATCACTTATCACCCAAAAGTTGGGATTTAGTGAT
ACACTGGGTGCATTTCTAGCTGGAGCCATTCTTGCAGAAACAAATTTCCGCACACAAATT
GAAGCTGACATAAGGCCATTCAGAGGCTTGTTGCTTGGGCTGTTCTTTATGACTACAGGG
ACTTCCATTGACATGCAGCTTCTCATCCGGGAGTGGCCTAATGTTCTGACACTGTTGGGG
GGTCTTGTTGCAATCAAGACATTGATAATTACCGCAATTGGGCCTAGAGTCGGGCTAACT
CTTAAAGAAAGTGTAAGGATAGGACTGCTACTTTCTCAAGGAGGCGAGTTTGGATTCGTG
GTGTTTTCTTTGGCAAACAGGCTCGGTGTCCTACCACTTGAGTTAAATAAACTGCTTATA
ATTGTTGTTGTGCTCTCGATGGCATTAACTCCGTTGCTCAATGAAGTTGGAAGAAGAGTA
GCAGGGATCATTGATGAAAGATCTGAAGAAAAAGAAAAGCCTGCTGAGATGGTGAATTAT
GGTGCCACTGAACCTGTTGTAATTCTTGGTTTTGGAGAGATGGGACAGGTCCTTGCTAAT
TTTTTATCTGCACCATTGTCATTTGGAATTGAGAAAGACACAGAAGGATGGCCATATGTC
GCATTTGATCTAAATCCTGCTGTTGTAAAGTCAGCTAGAAAATCAGGATTTCGTGTGCTA
TACGGAGATGGTTCACGCCCTTCAGTTCTGCAATCTGCTGGCATAACGTTTCCAAAAGCT
ATCATGGTTATGTATACTGGAAAGGAAAAAACAATTGAGTCTGTAAACAGATTGCGGCAA
GCTTTCACTGCGGTTCCAATATACGCTAGAGCTAAAGACCTCTCGCATTTGTTAGATCTT
AAGAAAGCAGGTGCAACAGACGTTGTCCTGGAAAATGCTGAGACTAGCTTGCAGCTAGGT
TCGATACTTTTGAAAGGACTGGGCGTCATGTCTGATGATGTATCCTTCTTGAGTAAGCTT
GTGAGAGACTCAATGGAGCTGCAAGCTCAGGAAGCACTAAAAGACATTGGGGACCAAGAT
GTTGATATCATGAAGCCTCTTCAGGTAAGAGTTTCAGATTTAGTGGATAGCAATGGTAAC
AGTTCAAGAATGGTAGCCCAGGAGCAGGCGTTAAGTCTAAGCAGGCGCCCAGATGTAAAG
GCAATAAAACCGGCAGTGACAAACAGGATACCTGATATGAAGGTGGAAAATGAAAATCCA
GGATATGACTTTGACAGAGTAGAATCTGAAGATGGTGTGGCATACTGTCTATTGGAATCT
GATGATGGAAGCGATGAAGCCTCCAGTACAAGCAAGGAAATGATTGATCAATCTGCTTGA

Peptide Sequence

PEP ID

OQU79639
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:60830698:60835533:-1 gene:SORBI_3008G173800 transcript:OQU79639 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASAAASAAAALARARLHVLLPASPPSAARASSAPTSASACCVLRCVGRTPRYGTKRRRR
FRAPRAGMDMDLASGAVEVINDLGFDTLTFLGVTVLVVPAFRVVKASPILGFFCAGVVLN
QFGLIRNLTDVKLLSEWGILFLLFEMGLELSLSRLKALARYAFGMGLPQVLLSTLAFTAF
ELPPNGAIGTKILQFLFDSRPDLVNIRSIDEAIVIGAALSLSSSAFVLQLLAEKGELPTR
FGSATLGILLLQDIAVVPLLVILPVLESQNIVERSLWPLLLAESLKALGGLGLLSLGGKY
LMRRVFEFVAESRSSEAFVALCLLTVAGTSLITQKLGFSDTLGAFLAGAILAETNFRTQI
EADIRPFRGLLLGLFFMTTGTSIDMQLLIREWPNVLTLLGGLVAIKTLIITAIGPRVGLT
LKESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPLLNEVGRRV
AGIIDERSEEKEKPAEMVNYGATEPVVILGFGEMGQVLANFLSAPLSFGIEKDTEGWPYV
AFDLNPAVVKSARKSGFRVLYGDGSRPSVLQSAGITFPKAIMVMYTGKEKTIESVNRLRQ
AFTAVPIYARAKDLSHLLDLKKAGATDVVLENAETSLQLGSILLKGLGVMSDDVSFLSKL
VRDSMELQAQEALKDIGDQDVDIMKPLQVRVSDLVDSNGNSSRMVAQEQALSLSRRPDVK
AIKPAVTNRIPDMKVENENPGYDFDRVESEDGVAYCLLESDDGSDEASSTSKEMIDQSA

Transcript Sequence

Transcript ID

OQU79639
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:60830698:60835533:-1 gene:SORBI_3008G173800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGTCGGCTGCCGCTTCGGCGGCGGCGGCGCTGGCACGGGCACGGCTCCACGTCCTC
CTCCCCGCGTCGCCTCCCTCCGCCGCCCGGGCATCCTCCGCGCCCACCTCGGCGTCGGCC
TGCTGCGTCCTCCGCTGCGTGGGTAGGACGCCCCGGTACGGGACGAAGAGGAGGAGGCGC
TTCCGGGCGCCGCGCGCGGGGATGGACATGGACCTGGCCAGCGGCGCCGTCGAGGTGATC
AACGACCTGGGCTTCGACACGCTCACCTTCCTCGGCGTCACGGTCCTCGTCGTCCCCGCC
TTCCGCGTCGTCAAGGCCAGCCCAATTCTCGGCTTCTTCTGCGCCGGCGTCGTGCTCAAC
CAGTTCGGCCTCATCAGGAACCTCACCGACGTCAAGCTCCTCTCCGAGTGGGGAATCCTT
TTCCTGCTGTTTGAGATGGGCCTGGAGCTCTCACTCTCTCGCCTCAAGGCTCTTGCCAGG
TACGCCTTTGGGATGGGCTTGCCTCAGGTTCTTTTGTCAACCCTCGCTTTCACGGCGTTC
GAGCTTCCTCCTAATGGCGCCATAGGAACAAAGATATTGCAATTTCTCTTCGATTCAAGA
CCTGATCTGGTGAACATCAGGAGTATTGATGAAGCAATAGTAATTGGAGCTGCGCTCTCA
CTATCTTCATCTGCTTTTGTTCTCCAGCTTCTTGCCGAGAAAGGTGAACTTCCAACAAGA
TTTGGTTCAGCTACACTGGGAATTCTTCTCCTGCAGGACATTGCAGTTGTCCCCCTGTTG
GTCATACTCCCTGTGCTAGAGAGTCAGAATATCGTGGAGCGAAGTTTGTGGCCACTTTTA
CTAGCTGAGAGCTTAAAGGCACTGGGCGGACTTGGCTTACTTTCCCTTGGCGGGAAGTAC
CTCATGAGACGTGTCTTTGAGTTTGTTGCAGAGTCAAGGAGTTCAGAGGCATTTGTTGCG
CTCTGTCTTCTTACAGTCGCAGGGACATCACTTATCACCCAAAAGTTGGGATTTAGTGAT
ACACTGGGTGCATTTCTAGCTGGAGCCATTCTTGCAGAAACAAATTTCCGCACACAAATT
GAAGCTGACATAAGGCCATTCAGAGGCTTGTTGCTTGGGCTGTTCTTTATGACTACAGGG
ACTTCCATTGACATGCAGCTTCTCATCCGGGAGTGGCCTAATGTTCTGACACTGTTGGGG
GGTCTTGTTGCAATCAAGACATTGATAATTACCGCAATTGGGCCTAGAGTCGGGCTAACT
CTTAAAGAAAGTGTAAGGATAGGACTGCTACTTTCTCAAGGAGGCGAGTTTGGATTCGTG
GTGTTTTCTTTGGCAAACAGGCTCGGTGTCCTACCACTTGAGTTAAATAAACTGCTTATA
ATTGTTGTTGTGCTCTCGATGGCATTAACTCCGTTGCTCAATGAAGTTGGAAGAAGAGTA
GCAGGGATCATTGATGAAAGATCTGAAGAAAAAGAAAAGCCTGCTGAGATGGTGAATTAT
GGTGCCACTGAACCTGTTGTAATTCTTGGTTTTGGAGAGATGGGACAGGTCCTTGCTAAT
TTTTTATCTGCACCATTGTCATTTGGAATTGAGAAAGACACAGAAGGATGGCCATATGTC
GCATTTGATCTAAATCCTGCTGTTGTAAAGTCAGCTAGAAAATCAGGATTTCGTGTGCTA
TACGGAGATGGTTCACGCCCTTCAGTTCTGCAATCTGCTGGCATAACGTTTCCAAAAGCT
ATCATGGTTATGTATACTGGAAAGGAAAAAACAATTGAGTCTGTAAACAGATTGCGGCAA
GCTTTCACTGCGGTTCCAATATACGCTAGAGCTAAAGACCTCTCGCATTTGTTAGATCTT
AAGAAAGCAGGTGCAACAGACGTTGTCCTGGAAAATGCTGAGACTAGCTTGCAGCTAGGT
TCGATACTTTTGAAAGGACTGGGCGTCATGTCTGATGATGTATCCTTCTTGAGTAAGCTT
GTGAGAGACTCAATGGAGCTGCAAGCTCAGGAAGCACTAAAAGACATTGGGGACCAAGAT
GTTGATATCATGAAGCCTCTTCAGGTAAGAGTTTCAGATTTAGTGGATAGCAATGGTAAC
AGTTCAAGAATGGTAGCCCAGGAGCAGGCGTTAAGTCTAAGCAGGCGCCCAGATGTAAAG
GCAATAAAACCGGCAGTGACAAACAGGATACCTGATATGAAGGTGGAAAATGAAAATCCA
GGATATGACTTTGACAGAGTAGAATCTGAAGATGGTGTGGCATACTGTCTATTGGAATCT
GATGATGGAAGCGATGAAGCCTCCAGTACAAGCAAGGAAATGATTGATCAATCTGCTTGA