Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU79629
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:60640648:60643475:-1 gene:SORBI_3008G172800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAGCACATGCTCCCTCTGCTCAACAACATGGAAGCTCCTCCCGGCCAGAGCAGCAAG
CAGCAGCAGCTGATGAGGACGGTGTCCATCTCCGTGCTGGTGATGTCGCTGCCGGTGCTC
TACGTCTCCTTCCTCCACGTCCCGCCGGCCGCACTCTTCAGGGACACCACCTTCTGGTTC
CTCATGTCCAACTCCATCATCATCGTCATCGCCGCCGACTCTGGCATGCTCTTCTTCCGC
TCTTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCAACGGACGACGATGATGACGGCGGC
CTCTCCTTCGCCGCTGTCTCCGTCTCCGAGCCGGCGGTGACCGTCTCCGTCGTCGTCAAG
GACGGCCACCACGCGCTAGGTGGCTCCGACGAGGCGGAGGCGGAGGCCATCAAGGACCAG
CAGGCTTTGGTTGTCCGGGAGCACGGAGACCTGTCGCCCATCGCCGAGAACGACCGCGCG
TACGCATTGGTCGAGCGGGGGGACCGAGCGGCGGTGACCACGCCGGAGACCACAGACATC
ATCGTCGTAAACCCGTCCGCGACGAACGTCGACGCCGGCGCAATCGTCGTGCCAGCGATG
ACGACGATGCCAAGGCGGCTGACGGCGAGCCGGAGCCTGGCCGAGAGGGAGGAGAGGCGG
GCGACGAGACGGCGGCACCAGCGCGTCGGGCACCGTCCGTCGCACTCGCAGGCGCTCGTC
CCGGTGCAGGACAAGAGCGTGGTGATCAGCGAGGAGAAGGAGAGGCGGCACCTCCGGCGA
GCCGCGACGACGGACAGGCGGCCACCGCCGCCTCCGCCGCCGTCGTCGGAGGAGGAGATG
ATCGACGAGAAGGAGAGCGAGTACTCGAGGCTGTCGGACGAGGAGCTCAACCGGCGCGTG
GAGGAGTTCATCGCCAGGTTCAACCGGGAGATCAGGCTGCAGCTGGAGAAGGAGGAGCAA
GCCGCCGCCGCCTGA

Peptide Sequence

PEP ID

OQU79629
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:60640648:60643475:-1 gene:SORBI_3008G172800 transcript:OQU79629 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MQHMLPLLNNMEAPPGQSSKQQQLMRTVSISVLVMSLPVLYVSFLHVPPAALFRDTTFWF
LMSNSIIIVIAADSGMLFFRSSSSSSSSSSSSTDDDDDGGLSFAAVSVSEPAVTVSVVVK
DGHHALGGSDEAEAEAIKDQQALVVREHGDLSPIAENDRAYALVERGDRAAVTTPETTDI
IVVNPSATNVDAGAIVVPAMTTMPRRLTASRSLAEREERRATRRRHQRVGHRPSHSQALV
PVQDKSVVISEEKERRHLRRAATTDRRPPPPPPPSSEEEMIDEKESEYSRLSDEELNRRV
EEFIARFNREIRLQLEKEEQAAAA

Transcript Sequence

Transcript ID

OQU79629
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:60640648:60643475:-1 gene:SORBI_3008G172800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TATACCTCTCTTTCTCACACATACAAGGCAGCAGAGAGCACCTCAAAGCCAAGCCATAGT
TCCAGAGCAAGGCCACGGCGAGCGGCGGCGGCGGGCGGCGAAGGCGGCATATGCAGCACA
TGCTCCCTCTGCTCAACAACATGGAAGCTCCTCCCGGCCAGAGCAGCAAGCAGCAGCAGC
TGATGAGGACGGTGTCCATCTCCGTGCTGGTGATGTCGCTGCCGGTGCTCTACGTCTCCT
TCCTCCACGTCCCGCCGGCCGCACTCTTCAGGGACACCACCTTCTGGTTCCTCATGTCCA
ACTCCATCATCATCGTCATCGCCGCCGACTCTGGCATGCTCTTCTTCCGCTCTTCCTCTT
CCTCCTCCTCCTCCTCCTCCTCCTCAACGGACGACGATGATGACGGCGGCCTCTCCTTCG
CCGCTGTCTCCGTCTCCGAGCCGGCGGTGACCGTCTCCGTCGTCGTCAAGGACGGCCACC
ACGCGCTAGGTGGCTCCGACGAGGCGGAGGCGGAGGCCATCAAGGACCAGCAGGCTTTGG
TTGTCCGGGAGCACGGAGACCTGTCGCCCATCGCCGAGAACGACCGCGCGTACGCATTGG
TCGAGCGGGGGGACCGAGCGGCGGTGACCACGCCGGAGACCACAGACATCATCGTCGTAA
ACCCGTCCGCGACGAACGTCGACGCCGGCGCAATCGTCGTGCCAGCGATGACGACGATGC
CAAGGCGGCTGACGGCGAGCCGGAGCCTGGCCGAGAGGGAGGAGAGGCGGGCGACGAGAC
GGCGGCACCAGCGCGTCGGGCACCGTCCGTCGCACTCGCAGGCGCTCGTCCCGGTGCAGG
ACAAGAGCGTGGTGATCAGCGAGGAGAAGGAGAGGCGGCACCTCCGGCGAGCCGCGACGA
CGGACAGGCGGCCACCGCCGCCTCCGCCGCCGTCGTCGGAGGAGGAGATGATCGACGAGA
AGGAGAGCGAGTACTCGAGGCTGTCGGACGAGGAGCTCAACCGGCGCGTGGAGGAGTTCA
TCGCCAGGTTCAACCGGGAGATCAGGCTGCAGCTGGAGAAGGAGGAGCAAGCCGCCGCCG
CCTGACGCGACGCGACTGACGCCATGCGCACATGCACAACAACCACTTCGATCGAGTCCG
TTCTCCGTTCCATGGCGCGCCGCCGCCATGTCCGGCCGCCAGTCGTTTGTATAGCAGAGC
ACTCCATGTCATGTCATGTCCGGCCGCCATGTCTGGCTGCTAGGATCTTGCAGATCATCA
TCTCTTTTCCATGTGTGTGTAGCAGAGCACTCCAAGATGATCGATCTTGTAGTTGTAGCA
GAGAAGATGATGAGTAGTGAGGATTTTTGATTTTGTAAGAAGGCGCGCACGCGCGCGTGG
GAATAAACTAAGGATTAGACAAGATATGCAGAGCAAGAGACAGAGATGGAGAGTTTATAT
TTGAAAATAATCAAGTTTGATTATAAAACTTGATTTATAATCATATTGGCTATTGAGTTA
TACCTGCACCTTTATTTTCTTTTCTTTAATTTTCTCTTTTTTTGAGACCACGTAGAAGCG
TGTTTTTCATTAATTGGAAAGGTCTTGACAGTACAAACGCTAGGTAACTACAGAGCTCAG
GAAAAATATATATATATATATATATAAACACAGATGTCAGGATTTCCGGTACTACGCAGG
AGCAGAGCCAGAGATGGAGATGGATCTTCTTCACTTGTTGAGCAAATCAGTTGAAGATCA
CATCAGAACAGTACCATTACAGTACTATTTCTGAGCTTCTGACAGCGACAAGATCTCAAG
CTCATGATCTTAATCGACAGGTACGGGTTTTTTTAAATAATGCCTCCGGAGACCAATCTA
AATCTCTTATTTTGTAGTATCCATTTAGTGTTTTTTTTTAATTCAGCAGAGACATGAGGA
TCCGGATGCAGGGGAGGGAGTGGAGAAGCATGAATTCTGAAGGGACAGTGAGACATGCAT
GTCTGTCATGCACAGTAACTTAATTGGATGGCTAATGGTGATGGTTAGGTTACCATTAGC
AGGGTGGTGTAGCGTAGCCTGGCACTGACAGGTGGGGAAGGCTTGGAAGTAGCACTGTCA
CTGCGAGTAGATATTTGTTTTGGAAAACAGGGTTATTTATTGGCTAATTTGTGTAGAGTT
TGGTTTTCATACTTCATCACTGTTTGCTGCAGTTCAGTGTTGTGCAAATAGTAGCCCATG
TACCACTTTTTAGTTAAGTAATAACTATGCTTATATCTTGTAACTAGTCATTAGTCAATA
ATTATGAAATGTTTGATATTGAGATATATGATGAAACCGTGACTTATATGCCTAGAAAAA
ATCATTTTTAAAACAGCAAAAAGTTAAAATTTATTCATAATCACTATCACTAGTTACCAG
CTACCTCTAGACACTTAGCAATGATTATTTTATAATTTGTTGGCTTATGATTGATTGCTA
GAGAGTCGTAGTAGTTATCCCAAAACCCAAACCTATGTGGTTACCCAACCGTAATAATCT
AGAGGAGAAGGGTTGACATACTGCCACTAACCCTTAGCTGTCACGTTACGTGTACCAAAT
TTAAGCTTGTGTGATTTGAAATACAAGCAGTAATCATTCACTCTCCAGCTTGAATCTAGT
TGTACCAAATCATTCACCTCTGTTTTTTTTTATTGGCAGGTTTGCAAATTCAAGTTGGAA
ATGTACAGCACGGAGTGTTGTGTTACCGTACCCTTTAATCCTTGATATGTGTTTAGATGC
TATAGTCCTGGATTGGGTAAGGCCTTGTATGGATCAATTCAGTAGGAACACGTGGCACCT
CAGGGTTC