Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU79596
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:60184178:60188748:-1 gene:SORBI_3008G167800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTTGTTTGCTAATTTTTTAATAGCTCTTATATTCCAGGGGGCTGCTGCTGCAGTTGTT
CACTATATGGGCTATACACCTGGCCTTTTCATTGTTGGGCTGTTTGGGATATTAATTATG
TGGATGTATGGCTACTTTTGGATTACAGGAATGCTTCTAGTTGCTGGAGGTTGTATGTGC
TCTTTGAAACATGCTCGCTATGTGATACCTGTTTTGACTTCATATGCTATTTATTCTGTG
GCTGTTCGTGTTGGGTGGCTTGGAGTCTTCTTGACACTCAACCTTTCTTTCTTGACAAAT
GATCTTCTTAATAAGTTAGCGCAAGGATATGAAGGAAGCACTGAAGAAAGCCAGTTTGAA
GACATCAAGGGTTCTGATCCAGTGATGGATGAGTTTTATCGTAGTTGTGAATTCCCACCG
GTTCCTGACAGTGAACCTGAGACCGTGTCTTCTGCGAAGCCATACTGCACAGCACCCGTC
CAAGATGTGTTACATGTACAAAAAGAGGAACCTCCTAGTAAAGTAGTGAAATCTGATTCT
AGTTCCTTGGATGAGATTAAGAGGATAATGGATGGTTCAAACCATTATGAAGTTTTGGGT
GTACCTCGTAATAGAAGCATTGATCAAAAGACCTTGAAAAAAGAATATCACAGAATGGTC
CTGCTTGTACATCCTGATAAAAATATGGGAAATCCATTGGCTTGTGAATCATTCAAAAAA
CTTCAATCAGCTTATGAGGTTCTCTCTGATTTCACAAAGAAAAACAGCTATGATGAACAA
CTGAGGAAAGAAGAATCACTGAAAATGACCCCAAGATCACGTGTTGTTTCTCAACAGAGT
GGTGTAGAGTTTCTCTCAGAAGAGTCCAGGCGGATACAGTGCACTAAGTGTGGTAATTTC
CATATATGGATATGCACCAAGAGAAGCAAAACAAGAGCAAGATTCTGTCAGGGCTGTGAT
CAGTTTCATCAAGCCAAGGATGGAGATGGATGGGTTGAAACCAGATTTTCATCCTCCATC
AAGATGGAAATACCACGAGCCTTTGTTTGTGCTGAGAGCAAAATATTTGATGTGTCTGAG
TGGGCTACCTGCCAGGGAATGGAGTGTAAGCCTAACACTCATGGTCCAACTTTTATGGTA
AACATGGTTGGCACAGATAGGATGCCTCAGAGATCCTACAGTTCCCGTTATCCCTTCAGC
TTGGACGCAGAGATGATCCCTGAAGATGAATTTGAGCTATGGCTTCAGCAGGCATTGGCA
TCAGGCGTATTCGCTGACAGCCCAAAGCGCAGGAAAAGCTGGAGCCCATTCAAACTGCCT
CAAAAGGGAATCAAAAGTTGGCGAAGATCATCATGA

Peptide Sequence

PEP ID

OQU79596
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:60184178:60188748:-1 gene:SORBI_3008G167800 transcript:OQU79596 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MLFANFLIALIFQGAAAAVVHYMGYTPGLFIVGLFGILIMWMYGYFWITGMLLVAGGCMC
SLKHARYVIPVLTSYAIYSVAVRVGWLGVFLTLNLSFLTNDLLNKLAQGYEGSTEESQFE
DIKGSDPVMDEFYRSCEFPPVPDSEPETVSSAKPYCTAPVQDVLHVQKEEPPSKVVKSDS
SSLDEIKRIMDGSNHYEVLGVPRNRSIDQKTLKKEYHRMVLLVHPDKNMGNPLACESFKK
LQSAYEVLSDFTKKNSYDEQLRKEESLKMTPRSRVVSQQSGVEFLSEESRRIQCTKCGNF
HIWICTKRSKTRARFCQGCDQFHQAKDGDGWVETRFSSSIKMEIPRAFVCAESKIFDVSE
WATCQGMECKPNTHGPTFMVNMVGTDRMPQRSYSSRYPFSLDAEMIPEDEFELWLQQALA
SGVFADSPKRRKSWSPFKLPQKGIKSWRRSS

Transcript Sequence

Transcript ID

OQU79596
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:60184178:60188748:-1 gene:SORBI_3008G167800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGTGCTCCGCCGCGAATCCTACTTGTCTTTGTCTTGTTGCTTCCGCGCTTTAGCTCAGAT
TTGATTTACCGGATAAGGATTTGTTTGGGTGATGGATTCTAAATCTTGACATGTGCTGCT
TTTGCTGTCCGACTTTGCGTTGCATGTGAGGTTACATTTCTTTACGAAAGTGGTTAAAGT
GTTGCCTGATGGATGGTGAAACAAATAGGATAGGATGGCCTGAACTGTGCTGCCACTGGT
TGCCTTCATGTGTTGTGTTGCTGCCAAATGTTTGTGTGAAGCTTTTAGTAGTATAAGCTT
CTTCTATGCTATCTCAAAGTAACATCTGTCTATGAACTGCACACTACGATATCAACTTCT
TTTATACTACTACTTAGTTCTATCTAGTTTGTTTTGCTACCAAAGAACATATGTGCACTG
CACACTGTGTTCTCAACTTCTTTAATACTACTACTTAGTTCTATCTAGTTTGTTTTGCTA
CCAAAGGTAGGATGGTGATGAAACGTGATTCTCGCTACTTTAGAAGTAACATATGTGAAC
TGCTGCGTTTTAAGTTTCTTTTGCACTACTTTGTTCTGTCTTGTTTTGCTACCAAAGTTA
GGATGGTGTGAAATGCTTTCGGATGAGTATGACCTGACCTACTAATCCTGTTATGTGAAT
ATATCTTACTATGCCAGAATGATGCTATGCTACTCCATCCTTCACCCTGCGAGGATCCTA
TCTCAGCAAAATGCTAGAAAGTTGATGTTCAATTGTTTCATCACGCAGTAACTACTGTTT
GTTTGATTAATTGAAATGTTAATACCTATGAATAAAGCGTACTTTTCATTGTAGATGGAT
TAACTCTAATATGCACTTACGCCTCTGCCATAGTTCGAGTTTTTGTCTGCTTGTAGCCCC
AGTTGTGAACATAGTGGGCTTAATTACAGGGAGAATGTTAGACCTTTTCAGCTAGACTAG
ATTGCACTAGGTAAGTCATACATGAATTCAATCAGTAGAAACAAAATAAAACAAAAGAAT
CCAATAATGCTAGGTCTCCTGATATTTTTTCATCTCAATGCTAGATTTTGACATTTTCAT
GCTGACTGCGTTGTTCATTATCATCAATGTACTTGTATAATATGTAGCTTATACTTGCAA
GTAAGGACACAAGGGACACGAGATTTTATATTTATAATTAGATTTAAAATTAGAAAAAGT
ATCTGAAGGTATGTTGTTTGCTAATTTTTTAATAGCTCTTATATTCCAGGGGGCTGCTGC
TGCAGTTGTTCACTATATGGGCTATACACCTGGCCTTTTCATTGTTGGGCTGTTTGGGAT
ATTAATTATGTGGATGTATGGCTACTTTTGGATTACAGGAATGCTTCTAGTTGCTGGAGG
TTGTATGTGCTCTTTGAAACATGCTCGCTATGTGATACCTGTTTTGACTTCATATGCTAT
TTATTCTGTGGCTGTTCGTGTTGGGTGGCTTGGAGTCTTCTTGACACTCAACCTTTCTTT
CTTGACAAATGATCTTCTTAATAAGTTAGCGCAAGGATATGAAGGAAGCACTGAAGAAAG
CCAGTTTGAAGACATCAAGGGTTCTGATCCAGTGATGGATGAGTTTTATCGTAGTTGTGA
ATTCCCACCGGTTCCTGACAGTGAACCTGAGACCGTGTCTTCTGCGAAGCCATACTGCAC
AGCACCCGTCCAAGATGTGTTACATGTACAAAAAGAGGAACCTCCTAGTAAAGTAGTGAA
ATCTGATTCTAGTTCCTTGGATGAGATTAAGAGGATAATGGATGGTTCAAACCATTATGA
AGTTTTGGGTGTACCTCGTAATAGAAGCATTGATCAAAAGACCTTGAAAAAAGAATATCA
CAGAATGGTCCTGCTTGTACATCCTGATAAAAATATGGGAAATCCATTGGCTTGTGAATC
ATTCAAAAAACTTCAATCAGCTTATGAGGTTCTCTCTGATTTCACAAAGAAAAACAGCTA
TGATGAACAACTGAGGAAAGAAGAATCACTGAAAATGACCCCAAGATCACGTGTTGTTTC
TCAACAGAGTGGTGTAGAGTTTCTCTCAGAAGAGTCCAGGCGGATACAGTGCACTAAGTG
TGGTAATTTCCATATATGGATATGCACCAAGAGAAGCAAAACAAGAGCAAGATTCTGTCA
GGGCTGTGATCAGTTTCATCAAGCCAAGGATGGAGATGGATGGGTTGAAACCAGATTTTC
ATCCTCCATCAAGATGGAAATACCACGAGCCTTTGTTTGTGCTGAGAGCAAAATATTTGA
TGTGTCTGAGTGGGCTACCTGCCAGGGAATGGAGTGTAAGCCTAACACTCATGGTCCAAC
TTTTATGGTAAACATGGTTGGCACAGATAGGATGCCTCAGAGATCCTACAGTTCCCGTTA
TCCCTTCAGCTTGGACGCAGAGATGATCCCTGAAGATGAATTTGAGCTATGGCTTCAGCA
GGCATTGGCATCAGGCGTATTCGCTGACAGCCCAAAGCGCAGGAAAAGCTGGAGCCCATT
CAAACTGCCTCAAAAGGGAATCAAAAGTTGGCGAAGATCATCATGAGGGTGTGGCATTAT
GCAGCAGGAGTCTAGGCAACTATAGCATTGGAAAGAAGGCAATGATACAGGGCTTCATGA
ATGTAAATAGACTGACCAACAATTTGCCTGGATGGACAACTAATTTTTGTTCGAAAGCAG
AAAGAGGATGAAAAAGAAACACTTGAACGAATAGTTATAACATGTTACTGTTGAACTTGG
TTCTCTCTGCAGCACCCCACGAACCAGTGTGCTATTCGTCCTGTGATCAAAATGCTGGTG
GACCTGTGGTGTATTAATTTCAGTAGTTTAGGTATCTGACATGGAAGAATGCCGAAACAT
CGTTCCTAAGATGGTTCAGATATGAAAGGGATGTTCATGTTAATGAGAAGTATTTCTGGC
ACTGTCTTTCTGTAAGAAGAGGGAAGGAAAGAAGGATGAAAGTGATGATACCGGAGACTG
GCTGTAAATACACTAAATGCTTTCACCTGTGGAATTACTGCTTGTAACATTGTATACACT
GATTAACCCTGTCAAAAACTTCCATAATCCAGGTCTGTGCTGTGATCTGTGACAGCATGA
CTTTTCTGGTGATAATAGAGGTCCAATTCTCTACTACTGTTTATCCTTCTGTTTTCTG