Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU79520
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:58848313:58853757:-1 gene:SORBI_3008G156200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAGACCACCGGGCCCGCATCGCCGGATAAGCCGCCGCCGGCTGTCGAGCCGGCGGAG
GCCGAGGACAAGGTGGAGAGGGAGGGGGCGCAGGCGAAGGAGGAGGACGAGGCGGCGGTG
GTGAAGGCGGGCGGCGAGGATGAGGAGGATGAGGAGGAGGAGGAGGAGGATGGGAGGGGA
GGCAAGCGGCAGCGGCGCCGTGCGGCGGGGGACAGCGCCGTGGCCATGGTGAAGCGGGAC
CTGCTGTTGCGCTGCTTGACGTGCCCGCTCTGCGACCGCCTGCTCCGCAAGGCCACCACC
ATCTCCGAGTGCCTGCACACATTTTGTAGAAAGTGTATTTATAAGAAGCTCAACGATGAG
GATCTTGACCACTGTCCAGTATGTAACATTGATCTGGGCTGCACTCCAGTCGACAAGCTT
AGGTCAAAGGAATGCTTGTCTTCTGAAACTCAGTTGAATGTTTCTATTGGCTATTTGACC
AAGATAGTTTCCCTTTCTTCATCATGCTACTCTTCTGATTTAGGGAAGAATTTCAGTGTT
TTTTTTGGACTTTTACTTGTTAGCTTGTATCGTTTGCCCTCTTATTCTAACTTTTTGATG
TATGGTTTCAGAGCTGATCACAATATACAAGATGTGAGGTCAAAAGTTTTTCCATTCAAA
AGGAAGAAGGTTAATGCTGAAGAAGCCGAATCTCCCATTACGCTACCTGTTAAAGTTAAA
GAGAGGTCTATCTCATCGTTGGTGGTCAATACACCTAGAGTAGCCCCAGCAGCTTCAACA
AGGAGGCGAACAAGAGCGGTTACCAGGAAGGCTGCTGCATTACGTGGCCTTGGTCCTATC
ATTGTGGATCCTTTAAAAAAGGATAATGATAACTCAAATAAGCAAACCGATAATTCAAGC
TTGCTAGATAGCTTGAGCAAAATACCTCAAACAAGAAGACAGTTATTGTCGAATGGGGAC
ACATCAGGTCATCCCTCTGTTAAAGATAAAGCAGGTGATAATAAAGACTTGGATAAGTCC
GAGCTCTGGAAACCTTTGAATCGTCTTGTAGACGCTGCAAGCAAAACAAAGGCCCTGACA
AGTGCACAAAGTCCAGCTTTGAAGGGAGATAAGCCCAGAGAATCTCCCAGTAGTGAACAT
TCTAGCAGAACAGAGGCTAGGGAGTCTCTTCAGAAGTCCAAAGCTGAAGATGACAAAAGT
GATGATCCTGAGCCAATAGTGCTGCTTAGAAAGAGAGGGCGGCCTGCCCGGAAGAGGAAA
GATTCCCTACCTGAAACAAATGCAGCTTCAGCTGCTACAGCTATCCAGGCCAGGAAGGCA
TTGAGCCCAATATGGTTTTCATTGATCGCCTCGTTTGACCAGAAAGGCGATCCTCCTTTG
CCTCAGATACCTGCCCACTATTTGAGAATAAAGGATGGGAGCATACCTGCATCATCCATC
CAAAGGTACATCATGCAGAAGCTCAGTCTTCTAAGCGAATCTGAGGTTGAAATACGCTGC
TGTGGGCAGACAGTGAACCTCGGGCAACCTGTGCGCAACTTGGTGGAGCGGTGGCTTAGG
GTTGGCCCGGCACGCCCGCTGCACACAGTGATAGGCTCCTCTGGGGGAGATTATGTGATG
GTGATAAGCTATGGGCGGCCAAAGTCTGTGTCTTCTTAA

Peptide Sequence

PEP ID

OQU79520
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:58848313:58853757:-1 gene:SORBI_3008G156200 transcript:OQU79520 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MQTTGPASPDKPPPAVEPAEAEDKVEREGAQAKEEDEAAVVKAGGEDEEDEEEEEEDGRG
GKRQRRRAAGDSAVAMVKRDLLLRCLTCPLCDRLLRKATTISECLHTFCRKCIYKKLNDE
DLDHCPVCNIDLGCTPVDKLRSKECLSSETQLNVSIGYLTKIVSLSSSCYSSDLGKNFSV
FFGLLLVSLYRLPSYSNFLMYGFRADHNIQDVRSKVFPFKRKKVNAEEAESPITLPVKVK
ERSISSLVVNTPRVAPAASTRRRTRAVTRKAAALRGLGPIIVDPLKKDNDNSNKQTDNSS
LLDSLSKIPQTRRQLLSNGDTSGHPSVKDKAGDNKDLDKSELWKPLNRLVDAASKTKALT
SAQSPALKGDKPRESPSSEHSSRTEARESLQKSKAEDDKSDDPEPIVLLRKRGRPARKRK
DSLPETNAASAATAIQARKALSPIWFSLIASFDQKGDPPLPQIPAHYLRIKDGSIPASSI
QRYIMQKLSLLSESEVEIRCCGQTVNLGQPVRNLVERWLRVGPARPLHTVIGSSGGDYVM
VISYGRPKSVSS

Transcript Sequence

Transcript ID

OQU79520
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:58848313:58853757:-1 gene:SORBI_3008G156200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTCTCGTCCCTCGATAAGCACGTAAAATAAATTTCGTTTTTTTTTTCCGTCGTCCTCCTC
TGCTTCAACTCCCCTCCTCTGCCTCGGCGTCGTCGTGCGCTCCGTCCGATCTCTCCTCCC
ATTTCCACGCGGAGGGGGAGGCGTCGGCGCAATAAAAGGCGGCGCCTTTGCTTCGCCGTC
CGCTCCCAGTTCCCCCCCGGCATGCGGAGCTAGCCTCGCGGCTGGGCCCCACGCCATGCA
GACCACCGGGCCCGCATCGCCGGATAAGCCGCCGCCGGCTGTCGAGCCGGCGGAGGCCGA
GGACAAGGTGGAGAGGGAGGGGGCGCAGGCGAAGGAGGAGGACGAGGCGGCGGTGGTGAA
GGCGGGCGGCGAGGATGAGGAGGATGAGGAGGAGGAGGAGGAGGATGGGAGGGGAGGCAA
GCGGCAGCGGCGCCGTGCGGCGGGGGACAGCGCCGTGGCCATGGTGAAGCGGGACCTGCT
GTTGCGCTGCTTGACGTGCCCGCTCTGCGACCGCCTGCTCCGCAAGGCCACCACCATCTC
CGAGTGCCTGCACACATTTTGTAGAAAGTGTATTTATAAGAAGCTCAACGATGAGGATCT
TGACCACTGTCCAGTATGTAACATTGATCTGGGCTGCACTCCAGTCGACAAGCTTAGGTC
AAAGGAATGCTTGTCTTCTGAAACTCAGTTGAATGTTTCTATTGGCTATTTGACCAAGAT
AGTTTCCCTTTCTTCATCATGCTACTCTTCTGATTTAGGGAAGAATTTCAGTGTTTTTTT
TGGACTTTTACTTGTTAGCTTGTATCGTTTGCCCTCTTATTCTAACTTTTTGATGTATGG
TTTCAGAGCTGATCACAATATACAAGATGTGAGGTCAAAAGTTTTTCCATTCAAAAGGAA
GAAGGTTAATGCTGAAGAAGCCGAATCTCCCATTACGCTACCTGTTAAAGTTAAAGAGAG
GTCTATCTCATCGTTGGTGGTCAATACACCTAGAGTAGCCCCAGCAGCTTCAACAAGGAG
GCGAACAAGAGCGGTTACCAGGAAGGCTGCTGCATTACGTGGCCTTGGTCCTATCATTGT
GGATCCTTTAAAAAAGGATAATGATAACTCAAATAAGCAAACCGATAATTCAAGCTTGCT
AGATAGCTTGAGCAAAATACCTCAAACAAGAAGACAGTTATTGTCGAATGGGGACACATC
AGGTCATCCCTCTGTTAAAGATAAAGCAGGTGATAATAAAGACTTGGATAAGTCCGAGCT
CTGGAAACCTTTGAATCGTCTTGTAGACGCTGCAAGCAAAACAAAGGCCCTGACAAGTGC
ACAAAGTCCAGCTTTGAAGGGAGATAAGCCCAGAGAATCTCCCAGTAGTGAACATTCTAG
CAGAACAGAGGCTAGGGAGTCTCTTCAGAAGTCCAAAGCTGAAGATGACAAAAGTGATGA
TCCTGAGCCAATAGTGCTGCTTAGAAAGAGAGGGCGGCCTGCCCGGAAGAGGAAAGATTC
CCTACCTGAAACAAATGCAGCTTCAGCTGCTACAGCTATCCAGGCCAGGAAGGCATTGAG
CCCAATATGGTTTTCATTGATCGCCTCGTTTGACCAGAAAGGCGATCCTCCTTTGCCTCA
GATACCTGCCCACTATTTGAGAATAAAGGATGGGAGCATACCTGCATCATCCATCCAAAG
GTACATCATGCAGAAGCTCAGTCTTCTAAGCGAATCTGAGGTTGAAATACGCTGCTGTGG
GCAGACAGTGAACCTCGGGCAACCTGTGCGCAACTTGGTGGAGCGGTGGCTTAGGGTTGG
CCCGGCACGCCCGCTGCACACAGTGATAGGCTCCTCTGGGGGAGATTATGTGATGGTGAT
AAGCTATGGGCGGCCAAAGTCTGTGTCTTCTTAAAAACAAACCATCATTGACCTGGCTGG
CGATCTCGTAGGTAGAACAAAGGGTTGCTCCGCCGCCCGTGAAGAGGCCATCATCAGAGT
TAAAGTGTCATATATACTCAACGGCGTAGCTGGCTGCTGTGCCTCAGCGGCTCATCCTCT
CACCGATGCTTCTAGATTATGCTCTGTTCTTCAAGAATGAATTTGTTTGTTTGTTCGTTC
GTTGTTACCATACATACATATGTGCTGAAAGTCGCTGTAATTTGGGATTTGGTAGGCTGT
GATAATTGACAGAGGCGAGATTGTTAACCTGAACTTAGGATGGCGATGAGTTCCTACATG
GGAGAGTGCTGCTGCTTCAGTTTTTTTTCCCTTGTTGAAGAGAGAAAAACAACCATAACG
TAGTTCCTTTATTTGTCCTGAACTAAACTGCCCTAATCTCCAGCTGTGACTGGTTCATAT
ATACACCCTATGCAATTACATTTTTAGTCTTGAAAGTTTGCAATCTGATGCTGTAATGAA
CTTGCACTATCTCCGGCATGTCCAAATGGTTTA