Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU79302
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:55181059:55187553:-1 gene:SORBI_3008G127100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTCTTCGCCGGCGCCGGCGGAAGAGGACGGCCGTGCGCCGACCAAGTACGTGCTGATC
ACGGGCGGCGTCGTCAGCGGCCTCGGCAAGGGCGTCACCGCCAGCAGCATCGGCGTCGTC
CTCAAGGCCTGTGGGCTCCGCGTCACCTGCATCAAGATCGATCCATACTTGAACACAGAT
GCTGGTACAATGTCCCCCTTTGAGCATGGTGAGGTGTTTGTTCTTGATGATGGTGGAGAG
GTTGATTTGGATTTGGGGAATTATGAGCGTTTCATAGATGTAACTCTGACGAGGGATAAC
AACATTACCACTGGAAAGATATACCAGTCTGTCATTGAGAAGGAGAGAAGGGGTGATTAT
CTTGGAAAGACTGTACAGGTTGTTCCTCATGTCACTGATGAAATAAAACAGTGGATACAG
TCCGTGTCTTCAGTTCCTGTGGATGGGCAGACTCGTCCAGCTGATGTTTGTGTTATTGAA
TTGGGAGGCACTGTAGGTGATATTGAGTCAATGCCATTCATTGAAGCTTTGCGCCAATTA
TCCTTTTCTCTTGGCAAGGAGAATTTCTGCCTCATACACGTTAGCCTTGTTCCAGTATTG
GGTGTAGTTGGTGAGCAGAAAACTAAACCAACACAACACAGTGTACGAGAACTGAGAGCG
TTGGGTCTGACTCCTGATCTTCTAGCATGCCGGTCAGCACAGCCACTAATAGGATCTGTT
AAGGAGAAGCTGTCACAATTTTGCCATGTCCCGGTTGAGAACATACTCAACATCCATGAT
GTTCCAAATTTATGGCATGTCCCACTTATTCTTAGAAACCAAAAGGCTCATGAAGCTATA
ATCAAACAACTGAACCTTGCTAGGTCCGCTGGACCACCTGAGTTACGAGATTGGACAGAT
ATGGCTGAGTCGTATGATAACCTCAAGAACTCTGTTAAAGTTGCTTTGGTTGGGAAGTAT
ACTAATCTGACAGATTCTTACCTATCAGTGGTGAAGGCTCTCCTACATGCCAGTGTTGCC
TGTTCGTTAAAGCCATCTATCCAGTGGATTGCAGCTTCGGATCTTGAAGATGCAACTGCA
ATATCTGCACCAGATGCCCATGCTGAAGCCTGGGAAACTCTTAAAGGTTCATCATGCATT
TTGATACCTGGAGGATTCGGGGATCGTGGAATCTCAGGGATGATATTGGCTGCAAAATAT
GCTCGTGAGAATAAAGTTCCATATCTTGGTATTTGCTTGGGCATGCAGATATCAGTGATT
GAGATGTCCAGACATGTCCTGGGCCTGGGAGATGCAGACAGTGAAGAGTTTAACAAGGAT
ACACCAAATCATATTGTTATGTACATGCCTGAGGTTTCAAAAACACATATGGGAAACACA
ATGAGGTTGGGCTGCAGGAGAACATTCTTCAGGAAACCTGATTGCCTTACATCAAAACTG
TATGGAAGTCCTCCACATGTAGATGAGCGTCATCGTCATAGATACGAGGTCAATCCCTCT
TTTGTTCCCATGCTTGAAAGTGCTGGTCTTCATTTTGTTGGTTGTGACGAAAGTCGAAAG
CGGATGGAGATTGTGGAGCTACAAGATCATCCATTCTATGTAGGTGTTCAGTTCCATCCA
GAGTTCAAATCAAGGCCCCGAAGACCTTCACCTCCTTTTACAGGTCTAATAATGGCAGCC
ACTAAACAACTGGGAACAATTTCGAATAGCTCGAATGGCTATGTTGGAGCTTCTGGCTAA

Peptide Sequence

PEP ID

OQU79302
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:55181059:55187553:-1 gene:SORBI_3008G127100 transcript:OQU79302 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MSSPAPAEEDGRAPTKYVLITGGVVSGLGKGVTASSIGVVLKACGLRVTCIKIDPYLNTD
AGTMSPFEHGEVFVLDDGGEVDLDLGNYERFIDVTLTRDNNITTGKIYQSVIEKERRGDY
LGKTVQVVPHVTDEIKQWIQSVSSVPVDGQTRPADVCVIELGGTVGDIESMPFIEALRQL
SFSLGKENFCLIHVSLVPVLGVVGEQKTKPTQHSVRELRALGLTPDLLACRSAQPLIGSV
KEKLSQFCHVPVENILNIHDVPNLWHVPLILRNQKAHEAIIKQLNLARSAGPPELRDWTD
MAESYDNLKNSVKVALVGKYTNLTDSYLSVVKALLHASVACSLKPSIQWIAASDLEDATA
ISAPDAHAEAWETLKGSSCILIPGGFGDRGISGMILAAKYARENKVPYLGICLGMQISVI
EMSRHVLGLGDADSEEFNKDTPNHIVMYMPEVSKTHMGNTMRLGCRRTFFRKPDCLTSKL
YGSPPHVDERHRHRYEVNPSFVPMLESAGLHFVGCDESRKRMEIVELQDHPFYVGVQFHP
EFKSRPRRPSPPFTGLIMAATKQLGTISNSSNGYVGASG

Transcript Sequence

Transcript ID

OQU79302
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:55181059:55187553:-1 gene:SORBI_3008G127100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCGCTCGGGAGACCGCTTGCTGCTACACTTCTTCTTCTTTCTTCTTCTTCTTCTCCTTCC
CAGCAGAAGCGAAAGCTCCCCCCTTTCCAATCCCACTTCCACACCCCCCTTCTTCTCCGG
CCTCCCTCCCGCGCGCGGCCATGTCTTCGCCGGCGCCGGCGGAAGAGGACGGCCGTGCGC
CGACCAAGTACGTGCTGATCACGGGCGGCGTCGTCAGCGGCCTCGGCAAGGGCGTCACCG
CCAGCAGCATCGGCGTCGTCCTCAAGGCCTGTGGGCTCCGCGTCACCTGCATCAAGATCG
ATCCATACTTGAACACAGATGCTGGTACAATGTCCCCCTTTGAGCATGGTGAGGTGTTTG
TTCTTGATGATGGTGGAGAGGTTGATTTGGATTTGGGGAATTATGAGCGTTTCATAGATG
TAACTCTGACGAGGGATAACAACATTACCACTGGAAAGATATACCAGTCTGTCATTGAGA
AGGAGAGAAGGGGTGATTATCTTGGAAAGACTGTACAGGTTGTTCCTCATGTCACTGATG
AAATAAAACAGTGGATACAGTCCGTGTCTTCAGTTCCTGTGGATGGGCAGACTCGTCCAG
CTGATGTTTGTGTTATTGAATTGGGAGGCACTGTAGGTGATATTGAGTCAATGCCATTCA
TTGAAGCTTTGCGCCAATTATCCTTTTCTCTTGGCAAGGAGAATTTCTGCCTCATACACG
TTAGCCTTGTTCCAGTATTGGGTGTAGTTGGTGAGCAGAAAACTAAACCAACACAACACA
GTGTACGAGAACTGAGAGCGTTGGGTCTGACTCCTGATCTTCTAGCATGCCGGTCAGCAC
AGCCACTAATAGGATCTGTTAAGGAGAAGCTGTCACAATTTTGCCATGTCCCGGTTGAGA
ACATACTCAACATCCATGATGTTCCAAATTTATGGCATGTCCCACTTATTCTTAGAAACC
AAAAGGCTCATGAAGCTATAATCAAACAACTGAACCTTGCTAGGTCCGCTGGACCACCTG
AGTTACGAGATTGGACAGATATGGCTGAGTCGTATGATAACCTCAAGAACTCTGTTAAAG
TTGCTTTGGTTGGGAAGTATACTAATCTGACAGATTCTTACCTATCAGTGGTGAAGGCTC
TCCTACATGCCAGTGTTGCCTGTTCGTTAAAGCCATCTATCCAGTGGATTGCAGCTTCGG
ATCTTGAAGATGCAACTGCAATATCTGCACCAGATGCCCATGCTGAAGCCTGGGAAACTC
TTAAAGGTTCATCATGCATTTTGATACCTGGAGGATTCGGGGATCGTGGAATCTCAGGGA
TGATATTGGCTGCAAAATATGCTCGTGAGAATAAAGTTCCATATCTTGGTATTTGCTTGG
GCATGCAGATATCAGTGATTGAGATGTCCAGACATGTCCTGGGCCTGGGAGATGCAGACA
GTGAAGAGTTTAACAAGGATACACCAAATCATATTGTTATGTACATGCCTGAGGTTTCAA
AAACACATATGGGAAACACAATGAGGTTGGGCTGCAGGAGAACATTCTTCAGGAAACCTG
ATTGCCTTACATCAAAACTGTATGGAAGTCCTCCACATGTAGATGAGCGTCATCGTCATA
GATACGAGGTCAATCCCTCTTTTGTTCCCATGCTTGAAAGTGCTGGTCTTCATTTTGTTG
GTTGTGACGAAAGTCGAAAGCGGATGGAGATTGTGGAGCTACAAGATCATCCATTCTATG
TAGGTGTTCAGTTCCATCCAGAGTTCAAATCAAGGCCCCGAAGACCTTCACCTCCTTTTA
CAGGTCTAATAATGGCAGCCACTAAACAACTGGGAACAATTTCGAATAGCTCGAATGGCT
ATGTTGGAGCTTCTGGCTAATGTAATGTCAGGTAAAGCGTTATGAAACTTCATTATTCTT
CAGGCATTTTCTCTGTGTATGTAACTAATGTTTCTGGACATTTGGTTTATGAATGGTACT
ATTGTTTCTTTTGCAGATAGGGATTCCTCTGGGTGAGAAGCATTTTGCTCGTTGCTGCAG
AAACCCAAGTTGTTTCTTGTACACATTATTAGATGTACCGGGAATAAATCTGAGCCAGAA
GAAGAGTTTTTTTATTCTCTCTAGAGACCACCTGAGTGGCGTCGCTAATGATCTTACAGT
GTATGGGGTCGAACGTCATGATTTTAGTGATTGTTATGCGCTTGTCCTCCCACCCTTGCC
ATTCCAATTGAGCTCAACAGCAGTCAGTCCTCCCATCCTTGCGATTCCAATTGGGATTAA
CAGCAGTCTGTGATTCTGTGCAAGGTAAAAGTTTGAGAGAAGCTCGAGATTGTCTTTGGT
CATGCAACTTTGAAACCAGAAATCTTGACCATTGAACTATCAACACCGGACAAGGTTGAC
TTTGTATTTTCTGATCAAAACAGCTTTATTTTCTAAAAATAAAAATCCATAACCAATTTG
TTTTATAATAAGAAAAAAAATGAAACTAG