Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU79246
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:53077685:53084505:1 gene:SORBI_3008G118400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTGATATCCAGGACAAGGAAGTCAGCATGGAAGGGCTATGCTCCATAGGCGCCTAT
GATCAGTGGACGCCGCTCTCTGTTTCTGGCCAGCTCCCGAAACCACGCTATAAGCATGGA
GCTGCGGTGGTTCAGCAGAAGATGTATGTCTTTGGTGGAAATCACAATGGCCGTTACCTT
GGCGACATTCAGGTTCTGGACTTCAAAACGTTTTCATGGTCAAAGCTGGAAGCTAAATCA
CAAGCAGGACCATCAGAATCAGCCGGAGAAGTTCCATTTTCTGCATGTGCTGGTCATTCA
GTGATTCAGTGGGGAAATAAGATCCTATGTCTTGCAGGACATACTAGAGAACCTGCAGAA
AGTCTCAGTGTCAAGGAGTTTGATCCACAAACCTGTACTTGGTCTACCTTGCGTACTTAT
GGAAGGTCACCGAGCTCACGTGGTGGTCAGTCAGTGACTCTTGTTGGAGAAACTCTAGTT
GTGTTTGGCGGTGAAGGTCATGGGAGATCTCTTCTGAATGATCTGCACATTCTTGATCTT
GAGAGCATGACTTGGGATGAATTTGAGACCACAGGCACTCCCCCTTCTCCGAGGTCAGAG
CACGCTGCTGCTTGCTTTGCAGAAAGGTATCTTCTGATATTTGGCGGGGGATCTCATTCT
ACATGTTTCAGTGACCTACACCTCCTTGACACTCAGACAATGGAATGGTCAAGACCAAAG
CAGCAAGGTGTTACTCCAGAACCAAGAGCAGGGCATGCAGGTGTAACTATTGGAGAATAT
TGGTTTATTACTGGGGGTGGAAATAGTAGGAAAGGTGTCTCGGTTACCCTTGTACTCAAC
ATGTCTACTTATGAATGGTCAGTTCTCACTGATCTTGAGGCCCATGCACCCCCTACAAGT
GAGGGCTCAAGTTTAGTAATGTACACAATTAATGGAGAGAATTTTCTGGTGTCATTTGGA
GGATATAGTGGGCGTTATAGTAATCAGGCTTATGCTCTCAAGGCAAGTCTCAAACCAAGT
GTCCCGTCTCAACAAATTGATGAAGCAGAGTCAAATGGTTTTGCCCCGTTATCTGTAGCA
GAAAATTCTAGCAGGAAAGTCATATTTGAAATTGAGGAACTTAAAGATGTAAAGCCTGGC
AATAGGGCAGATAACAGCAAAACCTTGGGACAAGTAGCTACGGATGAACAAAACCAAATA
GAAGACAGACTTAATCATGAGCGCTTGCAGAGTCTCCGCCTGAAGCAGGAACTAGCTGAT
GTGGAGAACAGAAATGCAGAACTTACTGAGGAACTCCACTTAGTTCGAGATAAACTTTCT
ATCGAGCAAACTAGGGCTTCCCAACTCGAGAATGAAGTTTCAGAGATTCAACAACGACTA
CAGAAGATGGATATCCTAGAAAAGGAGTTTGAATCACTTCGCAGTGAACTGGACAGTACT
GTATCCGAAGAAGCAGCTTCAAGTGGCAACCAGCTGCACCGCAGTCGCAGTCGGGGCTTC
TGGAGGTGGAATGGGTGA

Peptide Sequence

PEP ID

OQU79246
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:53077685:53084505:1 gene:SORBI_3008G118400 transcript:OQU79246 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MADIQDKEVSMEGLCSIGAYDQWTPLSVSGQLPKPRYKHGAAVVQQKMYVFGGNHNGRYL
GDIQVLDFKTFSWSKLEAKSQAGPSESAGEVPFSACAGHSVIQWGNKILCLAGHTREPAE
SLSVKEFDPQTCTWSTLRTYGRSPSSRGGQSVTLVGETLVVFGGEGHGRSLLNDLHILDL
ESMTWDEFETTGTPPSPRSEHAAACFAERYLLIFGGGSHSTCFSDLHLLDTQTMEWSRPK
QQGVTPEPRAGHAGVTIGEYWFITGGGNSRKGVSVTLVLNMSTYEWSVLTDLEAHAPPTS
EGSSLVMYTINGENFLVSFGGYSGRYSNQAYALKASLKPSVPSQQIDEAESNGFAPLSVA
ENSSRKVIFEIEELKDVKPGNRADNSKTLGQVATDEQNQIEDRLNHERLQSLRLKQELAD
VENRNAELTEELHLVRDKLSIEQTRASQLENEVSEIQQRLQKMDILEKEFESLRSELDST
VSEEAASSGNQLHRSRSRGFWRWNG

Transcript Sequence

Transcript ID

OQU79246
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:53077685:53084505:1 gene:SORBI_3008G118400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AATACGCTCCGGAAGAATCAGATCCTCAGTGGGTTTCTTCCGAGTTTGTGGATCCTTCGG
GTGTTGTTGAATTGCCGAACGTCCCCTCCGACCAAGGCAAGCCCCGGACATTAAACCCTA
TCCTTGTATTTTCATAAAGTTATTTATATCACTTGAGTTAATATGATGCATTAGGTGAAT
AGGAGTTGAGTGAATCCTATTTGCTGCATTATCTACCTTGATGATTTTCATATTAACCTT
GATACCTGTTTTATGAAAATACTTAGTATGCTTAGTCCTGCTTATTAGATAAGTTTTCAA
ATGAGAAAGTTTGAAGGGTTGTTGTGGAATACTTTTAAGGTCAGTAATGTTCAACTTGAG
ACCGGTCGGTGGACTTGCTTTAAGAATGGAGTCTTAAAGTAGTGTCTCCAACTGTGTCGA
TTAAGGACCGTACCGTTGATTGGCCTGTTGTGATTGAGACCTTTGAGTACAGCCCACATG
CGCTGGTAAGCCTTACCTATAGCTATTCCGATACTTGAGAACGGCTAACCGCGTACTGGG
AGTGGAAAGATGGCGAGAGTAGCGTGTACCCACCTTACGGATCTGAGATGACCGGGAAAC
ATCTAGATTGGCTGTAGGATGGTGGTGTACTGTACTCTCGGGTGACGCTGGACCCGTTCT
TGTATGGGAGGATCTATAGAAAAGGTTGACATATGCAAGATTAAGTTCTACATATGTCGT
GTGGTACTGAATCCCCAGCTGGGTTTAATCGATTCGAATCGCCGTGTTTCCTCGGATATG
GAGCCTCAATCCTCGTACCATCATCGTAGTAATAATTGAATCTTTGGTATAAGAAAGAGA
TGATTGGTTTATGAAAGTCTGATAATGATCTTGGCTAGTTATCTTGAGTTAAAACTTGAA
AGTAGGCTTTACTCTTAGTAAGCTTTTATGCAAAAGAAATACTTGATCTTGTTAAAGCTT
TACCTTGAATCCCCATAGCCTGCATACTTGAGTCTTCACCTCTTTTATAGTCGGTTAAGT
CTTGTTGAGTACTTTTGTACTCAGGGTTTTATTAACCCCTGTTGCAGGTGAACCTCTTGA
GAATCCTTTTGTTGGTCATGGTTACTTTACTCTTGTGGAGGAGAGTTATGATGATGATGA
AACTGATGAGTGACTTTGGGCAAGTAAAAGTTGTTGTGTGAATCTATGGTTTATGTAATA
ATAAAGTTCCGAAGCTTTTATGTATTAAATACTTATGGTTTGTAAACTTTGAACTTAAGT
TTCAATCTATGTTATGTAGACTCTATCATAGAGTCTAAAGTTATTTATTACCTCGAACAA
TGTGGACTTAGAGTCTAAATAAGATTTGGAGTCTTATTTTTTCTACCTTTTTCTTTAATA
AATATGCTGCCACATTAGCAAAATACTATAAATAATATATAATTAAGTATCTTGAACTCT
GTGATAGAGTCTTGCATTGTGAGTGCCATGAGTGCCCTTAAAACAAGCACACAACCGATG
AGCATTAACTTGAATCTGATTCCTCGTTGATCCGTCCGTGGCTGCACGAATCTCATCGTA
CGCCGCTTGAAGTCGCCTCCCAAGTACACATTTCGCGGGTCGCCGGTTCGCCGCTGCGTC
GAGCGCTTCCCCACCAGATCTAGAGCCTTCTAGAATCCTCCGTCCCGGCCCACCCGAGGC
TCCGCCGGATCCAGAACCTCCTAGAACCCCTGCACTGCGCGGTGCGCGCCCTCCTCGGCT
TCTCCTCCTCACCTCCATCCGGATCTCGACACCCCTCCCTCGGCGGCGGCACCAGACCTC
CGGTCCTGGGCGCGGCGCCGGGCGGCGAGATGGCGGTGAGTGAACCCCTCATGTGGATGA
TAACTCGTGTGCTGCCGCTTGGTTTATCGACTTGTTATCCGTGCTTCTTGCGTTGCGGCT
GCCTCCCAAGCTTTAGCAGCACAGAGTCATTACTACTTGCCACTGCCCGTTGCACATAGC
ACATGTTTGATGTTTTTCTTACATCTCGTCATCCTGCGGCCATTTTTGTTTATGCATTCC
GTTGTTGTGGACATTTTTTGTCCCATGATTCATGGTCGTGGTAGGCTCTGACAGTTCGAT
ATACTGATACGCTGATTATTAGGACCACCAGGATATGTGATCATGACCATTCTCTAACGT
AATAGTATGATTTTCTGAACTCTGATTGCGTGGACTTGTTTCCTTAATCTTGTTATTAGG
CCGCAAAAGGACCAGTGGCCGTCGGATCCGCTATCCCCAGCAGCATTGCCCCCGAGGAGC
CTAAAGTCGTCGCGCCGGAAGAGGAGAACGGGGAGATGGCTGATATCCAGGACAAGGAAG
TCAGCATGGAAGGGCTATGCTCCATAGGCGCCTATGATCAGTGGACGCCGCTCTCTGTTT
CTGGCCAGCTCCCGAAACCACGCTATAAGCATGGAGCTGCGGTGGTTCAGCAGAAGATGT
ATGTCTTTGGTGGAAATCACAATGGCCGTTACCTTGGCGACATTCAGGTTCTGGACTTCA
AAACGTTTTCATGGTCAAAGCTGGAAGCTAAATCACAAGCAGGACCATCAGAATCAGCCG
GAGAAGTTCCATTTTCTGCATGTGCTGGTCATTCAGTGATTCAGTGGGGAAATAAGATCC
TATGTCTTGCAGGACATACTAGAGAACCTGCAGAAAGTCTCAGTGTCAAGGAGTTTGATC
CACAAACCTGTACTTGGTCTACCTTGCGTACTTATGGAAGGTCACCGAGCTCACGTGGTG
GTCAGTCAGTGACTCTTGTTGGAGAAACTCTAGTTGTGTTTGGCGGTGAAGGTCATGGGA
GATCTCTTCTGAATGATCTGCACATTCTTGATCTTGAGAGCATGACTTGGGATGAATTTG
AGACCACAGGCACTCCCCCTTCTCCGAGGTCAGAGCACGCTGCTGCTTGCTTTGCAGAAA
GGTATCTTCTGATATTTGGCGGGGGATCTCATTCTACATGTTTCAGTGACCTACACCTCC
TTGACACTCAGACAATGGAATGGTCAAGACCAAAGCAGCAAGGTGTTACTCCAGAACCAA
GAGCAGGGCATGCAGGTGTAACTATTGGAGAATATTGGTTTATTACTGGGGGTGGAAATA
GTAGGAAAGGTGTCTCGGTTACCCTTGTACTCAACATGTCTACTTATGAATGGTCAGTTC
TCACTGATCTTGAGGCCCATGCACCCCCTACAAGTGAGGGCTCAAGTTTAGTAATGTACA
CAATTAATGGAGAGAATTTTCTGGTGTCATTTGGAGGATATAGTGGGCGTTATAGTAATC
AGGCTTATGCTCTCAAGGCAAGTCTCAAACCAAGTGTCCCGTCTCAACAAATTGATGAAG
CAGAGTCAAATGGTTTTGCCCCGTTATCTGTAGCAGAAAATTCTAGCAGGAAAGTCATAT
TTGAAATTGAGGAACTTAAAGATGTAAAGCCTGGCAATAGGGCAGATAACAGCAAAACCT
TGGGACAAGTAGCTACGGATGAACAAAACCAAATAGAAGACAGACTTAATCATGAGCGCT
TGCAGAGTCTCCGCCTGAAGCAGGAACTAGCTGATGTGGAGAACAGAAATGCAGAACTTA
CTGAGGAACTCCACTTAGTTCGAGATAAACTTTCTATCGAGCAAACTAGGGCTTCCCAAC
TCGAGAATGAAGTTTCAGAGATTCAACAACGACTACAGAAGATGGATATCCTAGAAAAGG
AGTTTGAATCACTTCGCAGTGAACTGGACAGTACTGTATCCGAAGAAGCAGCTTCAAGTG
GCAACCAGCTGCACCGCAGTCGCAGTCGGGGCTTCTGGAGGTGGAATGGGTGAATGAACG
CCTCAAGGCTCAAGTAGGAGTATTGAAGAGAATACACTTCCAAAGAGTTGCCATTCTTTT
AAATTGTCTTTCACAAAATTTTGAAGGAACATGATATATGAATTCAGGATGATACTAGTT
CGGAAGCATATACAGGATCTAAACAAACTGCACCTCCATCAACTGTGAAAAGCATCTTAT
ATAAAGTAAAATGAATGTCACGAGTT