Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU79223
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:52419434:52424205:-1 gene:SORBI_3008G115200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAAAAACTGCTACCTGAAGATGTACTCACCAACATCATTTGCCGTCTTGCACCACGC
TATGTTGCTATATCCCGTTGCGTCTGCAAGACCTGGTGTGCCATCATTGATGCCCGCAAC
CTTCTGCGTGCGGACCTCCTCCCACGCTCAGTGCGTGGAATATTCATTAACTTCAATGAG
TTAAGCATGTCAGAATTCTTCGTCCGCCCCTCAAAAGGCCGAACGGTATCTGGCAACTTT
AACTATTTGCCTCTTGGGTCCCGCATCATAGGCCACTGCAATGGGCTTCTCTTGTTTTGC
AACTATGTGATTAACCCAGCCACACGGCAGTCAGCTCCACTGCCCCCATGCACAAGCCCA
AATATTGTCATAGAGCACTTTGTTTGCAGAGACTACCTTGTATTTGACCCCCAATTGTCA
CCACATTATGAGGTATTCATGATCCCTCAGGTCCGATGCTATGGGAGGTATGAAATGTTG
AATTCTGATGATGAATTAGACCCTGCAATGGAGGGATTAGAATGGCCACCATCACCTTGG
ATCCTGAACGTGTTCTCATCAAGGACAAAGATGTGGCAGGAGAGGTCATTTGTTCGAGAA
GGGGAGGCTGCAGGGAATGTTGCTGACAGGCGGTTGGATTCTTCATGTGTTCAGGACAAC
TCTGTCTATTGGCGGGGAGTACTTTATGTAAATTGCCAAACCAAGTTTGTTATGAGAATA
TCCTTGTCAAATGGAAAATACCAAGTAATCAAGCCACCTGTATATTTTGAAAGGATGGAA
TGCACAGATCTTTATCTGGGAAAATCAGTGAAAGGAGTGCACTGTGCTTTATATGGCTTT
CCATCCAGTTTTTGGATTTATATTCTTGATGAATCGAGTGGAAGAATGGAGTGGGTATTC
AAGCATTCCTGTGATATTCAGCCATATCAAAGAATCGATGGGCGTGGACCCTGGACTTTA
CAAGATATTAACTGTCAGGACTGGTCCAATGAATTTGAAGAGGGTAAGGATGAGGCACTG
GTACAGGAGAAGTTTGAATGGGACTCGGACAATGATAATGTTATTGACACCATAAGCAGG
GGCAATCATCTGACTCGTGGTGATATTACTTTTCTCGGATTTCACCCTTACAAGGAGGTT
GTCTTCTTGAGTGACACATTAAGACGAGGATTGGCGTACCACTTAAATAGCTCAAAGATT
CAAGACTTGGGCAATATCCATCCAACATATTATGAAATAGAGACGGGTATTCAGCCATTT
ATACAGGCGTCTTTTCCATACACACCCTGGACGGGAGTGTTTCCGGAAGACAATTAA

Peptide Sequence

PEP ID

OQU79223
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:52419434:52424205:-1 gene:SORBI_3008G115200 transcript:OQU79223 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEKLLPEDVLTNIICRLAPRYVAISRCVCKTWCAIIDARNLLRADLLPRSVRGIFINFNE
LSMSEFFVRPSKGRTVSGNFNYLPLGSRIIGHCNGLLLFCNYVINPATRQSAPLPPCTSP
NIVIEHFVCRDYLVFDPQLSPHYEVFMIPQVRCYGRYEMLNSDDELDPAMEGLEWPPSPW
ILNVFSSRTKMWQERSFVREGEAAGNVADRRLDSSCVQDNSVYWRGVLYVNCQTKFVMRI
SLSNGKYQVIKPPVYFERMECTDLYLGKSVKGVHCALYGFPSSFWIYILDESSGRMEWVF
KHSCDIQPYQRIDGRGPWTLQDINCQDWSNEFEEGKDEALVQEKFEWDSDNDNVIDTISR
GNHLTRGDITFLGFHPYKEVVFLSDTLRRGLAYHLNSSKIQDLGNIHPTYYEIETGIQPF
IQASFPYTPWTGVFPEDN

Transcript Sequence

Transcript ID

OQU79223
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:52419434:52424205:-1 gene:SORBI_3008G115200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGGTGGCAAGTGGCAACTTATACGGAGCCCCGATCCGTGTTCGCCGCCGCCCCTTCTTCC
ACCAGCGTCGTCGCCGCCGCCTGCTGGCGAAATCCTAGTCTCCCGTCGCTGACCCTCGCC
GTCCGTGGTGACGGCTCCGTCCCTTCCGCCTGTGGCTAGCTATTAGTAGGTCACTAGCCG
AATCCGCGTCGTACTAGGTCATCAGCCGTCTGCCTGCCTTGCCGCTACTACTGACGTTTC
CACCGTCGCTGTCCCTTGCCGTCTGGAAGCAAGCAAGGCTAGCGAAGGAGAAGAGGAAGC
TCGGGAATAGAAGAAAAGGAGAAGGGAACAAAGGAAGAAGAATAAGAGGACGAAGGGGGA
AAAAGGAGGGATTTCGCGGAGTTCATCTGATCATCACAAATTCATATTCTTCGCTGCAAG
GGTAACTGTTTTTTTTAACTCTCTAGATGATTAATCATAAATATAGGATGATGATATTGG
TGTGGCCTTTGCCATCGATGGTTTAACCGACGCCTACCAAGTTTATTTCAATTCTGCTAT
TGGTCGGTGTGGAAGCTCAGGGAGTCAGGGTATCCCAAAACGGAAGCTGTAGATGTTGAT
TTCATTTGATTCCAATAAGCGATGTAGACGTCATTGTGGAATTAGTGCCGAAATGCACAA
TAATTTGTTTCGTTTCTTTATGGCTGATCTACTCAATCATGTTTACTAGTAGTATCTTAA
TGAGTTTTAGGTCAGCAGCTTGCATTTCTGTCAATTGTTATGTGGTACTGTCACCCTTGG
TATTGACATCTGGCTGCTGCATTTCGTTCGTCACATAAGGGCCTTCTTGAGCAGATATAT
CAGTAGCAGCATTGCCAATGACAGCAGATATATCAGTAGCAGCATTGCCAATGACACTCA
TAAGACATTTTCTTCGATTAGTTCCATCCAACTAAAAAAATCCTTGAGTGACTGGCTGCA
GTATGCACCTGTCATTTAATCAAACAGAAGCATCTTAAGACAATGGAACCGATCTGGCCA
AAATTCACATTTTTGCTGATGTTTGTCAAGTGCTTCCGTGGTTGTTATCAATGTCCTGAG
AGGTCAGTGGTGCTACATTCTGCTCCTTGGTTCTGTAGTGACTGCAGTGGCATAGCTAGC
ATCTGCAGCAGGAGTGGCATAGCTAGTACTCTATTGTTTCTCCACCCCAGAAGTCAGAGG
ATCCTATCCTAATTTCTGAAATTAGTTGCCATGCTTTATCTGTAGGCATTATCAACTGCA
ATGGTAGAGTAACCTTAGTGTACTTCTGATCAATTAGAACAGCTAACATTTACTCTTTAC
AGGTATATACAATTTAGACTGCTGATACCTCTGGAGAATGCTTGAGCTGCTTGTGTGGTT
TAGCGGTTTATGTCTAAAACACTAATAGCAGAGCTAAATCGGGCTATAGCGGGATATAGT
GGCTAAATTGTACATGAACACAAATAGCGGCACTCTGCCTCAAAAGGCTATAGCGGGCTA
TAGTGGCAGCTATAGCGGGAGATTTAAAACTATGATCCACGGTAAGGCAACGGATCTAGT
GTAAACTCATCTCCCATGCAAACTGTGCAAACTCTAATATGGACCGCAGGATGTTGATCC
AAGGGGGCGCATGAGAGAGGTGGAAGGAGGGATTTGTAAAAGTGTGATTAAGAGCGGGCG
GTTAAGTACAAAATTATCAATCTCTCCGTGCCCCTTGGATCAACATCATGTGATCCAGAT
TAGAGTTTGCACAGTTTGCACGGGAGATGAGTTTGCACTAGATCCGTTGCCCCACGGTAA
ATCTATATCAGTTTCTTGCCCCATATAATTCTGGATGTTTTGCAGACATCTTCATCTCGG
TGGCATTTTGTGTTCTCTTCATTTACTCAAACTGTCTTTTTGTGCACTGTGCAGTCTGAT
AGTTCAGAATTTTAAACTGATATCCTGTTCTGCCATTCACCACTAGTTACAACAACTGAT
ATCTAATCGCCATCATGTCAAATAATTTTGAATATGTGCTTTGCATGTATACTTCTTAGA
AATGCTATTTTATTATAAAGCACAAATTAGTTGTCTTTGGAAAATAAAAGAGAATCAAAG
AAGTGAACAGTTTTTTTTCTTCCCTTATGCTTTAGGGTCTTTCTTTTAAGGAGTAGTGGA
CTCAGGTTTCTTTTGAGAGTAAAGAGTACTGGACTTCTTTTTTTAAACACACACACACAC
ACCACATCCACTTTTCAGTTTGGCCTGTGTGCCGCATATGGGTTCAACTCAAAAGGACTG
CCATCCCATTGCAACCGTTTTGTACAGAACAATATGCACCAGCTCCTCCATCTTGCTTCT
GTTGCTATGTTGCCCATCTCGTGGTACAACCCAGATCATGGGTGACTTATAATTTGGGAC
AGACATATGATGATCAGCATCGCGACACTGCATGGAATTGTTTTAGGCTAACATGATCGG
ATCATTGAATCAGGATTCTACAATCTCTTCTCTAGAATCTCTACATTTGATTGGATAAAT
CACATCATCTAGAAAGTATTCAGTATGGATTTGTCATGAAATCATGCTGTTATTGTTACT
TAGCTGAAACAGGGGATTAGAGCCCCTAGCACGGTAGTATCAGAGACTGCATAAACAGCT
GCCAATTTTTGATGATCACATATTGGTGATTAATGAACACACTAGTGAATCCTCCGCCAC
AATACCCGTCGTCCATCTTGACATTGCTTACTTTGTTCTTTTTGTTTGCTGATGAGGTAA
ATCTGATTATTTTTCACTGTGCAGATAGACATGGGGCTTGTGTGGATATGAAGGAATAAG
TGGTCTTAAGACAATTTGGAACAACAGAGGGCATGGAAAAACTGCTACCTGAAGATGTAC
TCACCAACATCATTTGCCGTCTTGCACCACGCTATGTTGCTATATCCCGTTGCGTCTGCA
AGACCTGGTGTGCCATCATTGATGCCCGCAACCTTCTGCGTGCGGACCTCCTCCCACGCT
CAGTGCGTGGAATATTCATTAACTTCAATGAGTTAAGCATGTCAGAATTCTTCGTCCGCC
CCTCAAAAGGCCGAACGGTATCTGGCAACTTTAACTATTTGCCTCTTGGGTCCCGCATCA
TAGGCCACTGCAATGGGCTTCTCTTGTTTTGCAACTATGTGATTAACCCAGCCACACGGC
AGTCAGCTCCACTGCCCCCATGCACAAGCCCAAATATTGTCATAGAGCACTTTGTTTGCA
GAGACTACCTTGTATTTGACCCCCAATTGTCACCACATTATGAGGTATTCATGATCCCTC
AGGTCCGATGCTATGGGAGGTATGAAATGTTGAATTCTGATGATGAATTAGACCCTGCAA
TGGAGGGATTAGAATGGCCACCATCACCTTGGATCCTGAACGTGTTCTCATCAAGGACAA
AGATGTGGCAGGAGAGGTCATTTGTTCGAGAAGGGGAGGCTGCAGGGAATGTTGCTGACA
GGCGGTTGGATTCTTCATGTGTTCAGGACAACTCTGTCTATTGGCGGGGAGTACTTTATG
TAAATTGCCAAACCAAGTTTGTTATGAGAATATCCTTGTCAAATGGAAAATACCAAGTAA
TCAAGCCACCTGTATATTTTGAAAGGATGGAATGCACAGATCTTTATCTGGGAAAATCAG
TGAAAGGAGTGCACTGTGCTTTATATGGCTTTCCATCCAGTTTTTGGATTTATATTCTTG
ATGAATCGAGTGGAAGAATGGAGTGGGTATTCAAGCATTCCTGTGATATTCAGCCATATC
AAAGAATCGATGGGCGTGGACCCTGGACTTTACAAGATATTAACTGTCAGGACTGGTCCA
ATGAATTTGAAGAGGGTAAGGATGAGGCACTGGTACAGGAGAAGTTTGAATGGGACTCGG
ACAATGATAATGTTATTGACACCATAAGCAGGGGCAATCATCTGACTCGTGGTGATATTA
CTTTTCTCGGATTTCACCCTTACAAGGAGGTTGTCTTCTTGAGTGACACATTAAGACGAG
GATTGGCGTACCACTTAAATAGCTCAAAGATTCAAGACTTGGGCAATATCCATCCAACAT
ATTATGAAATAGAGACGGGTATTCAGCCATTTATACAGGCGTCTTTTCCATACACACCCT
GGACGGGAGTGTTTCCGGAAGACAATTAATTTTTCCTTGAAGATTATGATACTATAGGTA
GCATGCCCGTGCGTTGCTACGGAACAACTAAACTTTTGTACTAAAAACACATACTCTGTC
ACTTCTAACACCAAAGAAAAGAGTTGTGTTCCTGCATATGCCGTACTGTTTGCTTGTGTT
CCTGCATAAGAAGCAATCACCAGAGTAGCCAAGAATAAGACGAAACTTGAAGACATAATC
ACCAGCAGATTTTGGTCGGTCCTTGAGAGTTTTTTTATCCAGGAATACAGGACACGTGCT
ACCAATCAAGGAGAATACAAACAGTTCTATCAACATCTATTTTTCAGCAAATTGTCCAGA
AAAACACAACCAGTTTCTCACCCATGATCTACACAAGAGTAGCTATAGATTATCCTGTAC
ATCAAAACTACAGATTAGAGAAGAAGTAGCATTCAATATGATTTACTCTATTAGCTACAG
ATAACATGGAACTATATGTAATATGAGCAAAAAAAGAGAAAATAA