Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU79216
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:52074821:52077543:1 gene:SORBI_3008G113200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCGCGCGGGCGGCGACGAGGAGGAGCACGGCGACGAGGACTCGAGGAGGGTTAGCCAC
CAGCGGGGTGGTTTTGCGGATAGGTCCCTGCACGAGCCGGCGAGGAGGTCTTGGGCAGCT
GGCCTGCGGACCAACGACCAAGCCATGCTCGCGGCCACCGGCGGTAGGCTGTTCTCCGCG
GCGTCCGCGCGAGGCGGTCACGCGGGCGGTGGTGTCTCCGCGGGGAGTGGGGACACGCTG
GGGAAGCGGTTGCTGAAGCTCATCTACCCGAAGCGGAGCGCGGTGGTGGTGCTCCGGCGG
TGGGCGGAGGAAGGCCGCACCGTGGAGAAGTACCAGCTCAACCGCGTCGTCAGGGAGCTT
CGGAAGTACGGCCGCTTCAAGCACGCACTCGAGATCTGCGAGTGGATGCGGACGCGGCCG
GAGATGCGGCTGCTGCCGGGGGACCACGCGGTGCACCTCGACCTGGTCGCCAAGGTCCGG
GGGCTCGCCAGCGCCGTCAAGTTCTTCGAGGACATGCCGGAGCGCGCCAAGGCGCCGTCC
ACCTGCAACGCGCTGCTGCACGCGTACGTGCAGCACGGCGCGAGGGAGAAGGCCGAGGCC
ATGATGGCGGAGATGGCCCGTGCCGGGTACCTCACCTGCGCGCTGCCCTTCAACCACATG
ATGTCGCTGTACATGGCGAGCGGCGAGCTCGAGCGGGTGCCGGAGATGATCAAGGAGCTG
AGGAGGTACACGGTCCCCGACCTCGTCACCTACAACATGTGGCTCACGTACTGCTCCAAG
AAGAAGAGCGTGAAGAGCGCTGAGAAGGTGTTTGCTCTCATGAAGGATGATAGGGTGGTT
CCTGACTGGATGACCTTCAGCTTGCTCGGTAGCATCTACATCAATGCCGGACTCCATGTC
GAGGGCCGGAACGCGTTGGTGGAGATGGAGAAGATGGCCTCCAGGAAGGAGCGAGCCGCA
TACTCGTCACTCCTCACCCTGTATGCGAGCTTGTCAGATAGAGGGAACTTGGACAGGGTG
TGGAATAAGATGAGGGAAACCTTCAGGAAGTTCAGCGACACGGAGTACAAGTGCATGCTC
ACTTCCCTCACGAGGTTTAACGACATAGCTGCAGCAGAAGGCCTTTACAGGGAATGGGAA
TCAGCGTCGGGAACACGTGATTCAAGGATCCCGAACACGATCCTTTCGTATTACATCAAG
AATGGCATGATCGAGAAGGCAGAGAGCTTTCTTGGCCAGATTGTGGAGAAAGGAGTGAAA
CCCAGCTATAGCACATGGGAGTTATTCATCTGGGGTTATCTCGGCGACAACAAGACGGAC
AAAGTCCTTGAGTGCCTGAAGAAGGCCCTCTCAAGCTTGGAGAAATGGGAGCCAAACCAT
GAGCTCGCCACCGCGATCTTTTCTCAGGTCGAGAAGACAGGTGACATTGAAGCTGCAGAG
AAGCTCCTAGTCGTGTTCCGGGATGCAGGGTATGTGACCACTGAGATGTACAACTCGGTC
TTGCGCACTTATGCAGAGGCCAAGCTCATGCCTCTGATAGTTGACGAACGCATGGAGCAA
GACAAGGTGGCCATGGATGTGGAAACCAGGAGATTGTTGAGGTTGACCAGCAAATATCCA
ATCGGTGAGGTTTCAACATTGATGTCTTGA

Peptide Sequence

PEP ID

OQU79216
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:52074821:52077543:1 gene:SORBI_3008G113200 transcript:OQU79216 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MRAGGDEEEHGDEDSRRVSHQRGGFADRSLHEPARRSWAAGLRTNDQAMLAATGGRLFSA
ASARGGHAGGGVSAGSGDTLGKRLLKLIYPKRSAVVVLRRWAEEGRTVEKYQLNRVVREL
RKYGRFKHALEICEWMRTRPEMRLLPGDHAVHLDLVAKVRGLASAVKFFEDMPERAKAPS
TCNALLHAYVQHGAREKAEAMMAEMARAGYLTCALPFNHMMSLYMASGELERVPEMIKEL
RRYTVPDLVTYNMWLTYCSKKKSVKSAEKVFALMKDDRVVPDWMTFSLLGSIYINAGLHV
EGRNALVEMEKMASRKERAAYSSLLTLYASLSDRGNLDRVWNKMRETFRKFSDTEYKCML
TSLTRFNDIAAAEGLYREWESASGTRDSRIPNTILSYYIKNGMIEKAESFLGQIVEKGVK
PSYSTWELFIWGYLGDNKTDKVLECLKKALSSLEKWEPNHELATAIFSQVEKTGDIEAAE
KLLVVFRDAGYVTTEMYNSVLRTYAEAKLMPLIVDERMEQDKVAMDVETRRLLRLTSKYP
IGEVSTLMS

Transcript Sequence

Transcript ID

OQU79216
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:52074821:52077543:1 gene:SORBI_3008G113200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTGCACCGTCGCCGCATCCGCCGCGGCTGCCCCGGCCGGCCGCAGCAGCCACGGATCCGC
CAGGAACCCCTCGAGCGCCGCCGCCGCGCCCGCCCATACCGCACCCCCTCCTCCCTTGTT
GCTCGCCGCCGCGGCTCCGAACCCTAGCTCGCAGTCGCACACCCTCCTGCTGCATAGGAA
CAGAGAGAGACAGACAGAGACGCCCCCGTCCGTCAGAGCGCGCGGGCGTTACAGACAAGG
AAGAAGGCGGAGGCGGAGGAGGGAGGCGGGGGGTGACGGACGAGACACAGAGAGGGGAGT
GAGGGGGGCTTACCAAGTGATGGGGCACGCGACGTGAAACGCCATGGGAGGGAGGCGGCC
ACAGCCCCCAGATGGGTTGGGTGGTGTTTGGACGCGTTTTGGGGGAAATTCGGGCTGGAT
TCGCGTGGGATTTGCGTTTGGCAAATTCCGATTTCGATGCGCGCGGGCGGCGACGAGGAG
GAGCACGGCGACGAGGACTCGAGGAGGGTTAGCCACCAGCGGGGTGGTTTTGCGGATAGG
TCCCTGCACGAGCCGGCGAGGAGGTCTTGGGCAGCTGGCCTGCGGACCAACGACCAAGCC
ATGCTCGCGGCCACCGGCGGTAGGCTGTTCTCCGCGGCGTCCGCGCGAGGCGGTCACGCG
GGCGGTGGTGTCTCCGCGGGGAGTGGGGACACGCTGGGGAAGCGGTTGCTGAAGCTCATC
TACCCGAAGCGGAGCGCGGTGGTGGTGCTCCGGCGGTGGGCGGAGGAAGGCCGCACCGTG
GAGAAGTACCAGCTCAACCGCGTCGTCAGGGAGCTTCGGAAGTACGGCCGCTTCAAGCAC
GCACTCGAGATCTGCGAGTGGATGCGGACGCGGCCGGAGATGCGGCTGCTGCCGGGGGAC
CACGCGGTGCACCTCGACCTGGTCGCCAAGGTCCGGGGGCTCGCCAGCGCCGTCAAGTTC
TTCGAGGACATGCCGGAGCGCGCCAAGGCGCCGTCCACCTGCAACGCGCTGCTGCACGCG
TACGTGCAGCACGGCGCGAGGGAGAAGGCCGAGGCCATGATGGCGGAGATGGCCCGTGCC
GGGTACCTCACCTGCGCGCTGCCCTTCAACCACATGATGTCGCTGTACATGGCGAGCGGC
GAGCTCGAGCGGGTGCCGGAGATGATCAAGGAGCTGAGGAGGTACACGGTCCCCGACCTC
GTCACCTACAACATGTGGCTCACGTACTGCTCCAAGAAGAAGAGCGTGAAGAGCGCTGAG
AAGGTGTTTGCTCTCATGAAGGATGATAGGGTGGTTCCTGACTGGATGACCTTCAGCTTG
CTCGGTAGCATCTACATCAATGCCGGACTCCATGTCGAGGGCCGGAACGCGTTGGTGGAG
ATGGAGAAGATGGCCTCCAGGAAGGAGCGAGCCGCATACTCGTCACTCCTCACCCTGTAT
GCGAGCTTGTCAGATAGAGGGAACTTGGACAGGGTGTGGAATAAGATGAGGGAAACCTTC
AGGAAGTTCAGCGACACGGAGTACAAGTGCATGCTCACTTCCCTCACGAGGTTTAACGAC
ATAGCTGCAGCAGAAGGCCTTTACAGGGAATGGGAATCAGCGTCGGGAACACGTGATTCA
AGGATCCCGAACACGATCCTTTCGTATTACATCAAGAATGGCATGATCGAGAAGGCAGAG
AGCTTTCTTGGCCAGATTGTGGAGAAAGGAGTGAAACCCAGCTATAGCACATGGGAGTTA
TTCATCTGGGGTTATCTCGGCGACAACAAGACGGACAAAGTCCTTGAGTGCCTGAAGAAG
GCCCTCTCAAGCTTGGAGAAATGGGAGCCAAACCATGAGCTCGCCACCGCGATCTTTTCT
CAGGTCGAGAAGACAGGTGACATTGAAGCTGCAGAGAAGCTCCTAGTCGTGTTCCGGGAT
GCAGGGTATGTGACCACTGAGATGTACAACTCGGTCTTGCGCACTTATGCAGAGGCCAAG
CTCATGCCTCTGATAGTTGACGAACGCATGGAGCAAGACAAGGTGGCCATGGATGTGGAA
ACCAGGAGATTGTTGAGGTTGACCAGCAAATATCCAATCGGTGAGGTTTCAACATTGATG
TCTTGAGGTGTGCCAATAATAGAAGGGGTGTTTCAGGATGCAATGTGTACATGCCCATAT
GTTTTCGCGCACTTCGGTTTTGAAGTACAAAATGCAAATAACAATCATTTAGTTTTGAAG
TGCAATACAGAGGGGTGTGATTTTGCATACTAACTCATATTTTTTGATTTGCTGAGATAA
GGAACCAGATA