Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU79178
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:49760626:49764366:-1 gene:SORBI_3008G105500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTACCTGGTGAAGGACATTAGCGGCGCCATCGGGCTGATGGCGGTGGCGTTGGTGCTC
CTGGGCACCTGGCCGGTTGTCCTGGCGGTGCTAGAGCGGCGGGGCCGGCTGCCGCAGCAC
ACGTTCCTTGACTTCTCCGTCACCAACTTCCTGGCCGCCGTGCTCGTCGCGCTCACCTTC
GGCCAGATCGGCCCCGACACGCCGGAGACGCCCAACTTCCTCACCCAGCTCGCTCAGAAC
AACTGGCCTTCGGTGTTGTTCGCGATGGCGGGCGGCGTCACCCTCAGCCTGGGGACACTT
GCCACGCAGTACGGCTGGGCGTTCGTCGGCCTTTCCGTCACTGAAGTCATGGCCTCAAGC
CTCAAGGTCGTTATAGGGACGACGCTCAACTATTTCCTCGACGGCCGGATCAACAAGGCA
GAGATCCTCTTCCCCGGTGTCGGCTGCTTCCTGATTGCGGCCATCCTTGGGTCACTTGTC
CACGCTTCCAATGCCGCCGACAACCAGGAAAAGCTGGCAAACTCCTTGGCGAAGTACAGC
AAAAATACAAGGAAGAACACTGCAGACGATGAGGATCTCACCAAACACCTCCTTAACAAA
GAGATACCAAAGGATCCAGAAGCTGCAAAGCCGGATGCAGCAGATCAGGCTACTGAGGCC
CCGGAGAAAGTAGAGGCAGGAACGGCAGAGTTCCTGGTTAACCTGGAGGAGAAGAGATCG
ATTAAAGTGCTGGGTTCGCACACGCTGCTGGGCCTCGGGATCGTGGTGTTCGCGGGCGTC
TTCTACGCGCTGTTCGCGCCGGCGCTGAACCTGTCGACCAACGACCAGTGGCACGCGCTC
CCCGCCGGCGTGCCGCACCTGGTGGTGTACACGGCCTACTTCTACTTCTCCCTCGCCTGC
CTCGCCGTCAGCGCGGCGCTCAACGTGTGGCTCCTGTACCGGCCCATCATGGCCGGCGTG
CCGGCGAGCTCCACCGTGTCCGCGTACCTCCGGGACGGCGGCGAGGGCAGGGCGCCCGCG
ATGCTGGCGGGGATGGTGTGCGGGCTCGGGAACGCCTTCACGTTCATGGCGGGGCAGGCG
GCCGGGTACGCCGCCGCCGACTCCGTGCAGGCGCTGCCGCTCGTCAGCACCTTCTGGGGC
GTCGTGCTGTTCGGCGAGTACCGCCGGTCGTCAAGACGCACGTACACGCTGCTGGCCAGC
ATGCTGCTCATGTTCACCGTCGCCATGGTCCTCCTCATGGCTTCCTCCAACCACAGGAAG
CCGCTCTGA

Peptide Sequence

PEP ID

OQU79178
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:49760626:49764366:-1 gene:SORBI_3008G105500 transcript:OQU79178 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MYLVKDISGAIGLMAVALVLLGTWPVVLAVLERRGRLPQHTFLDFSVTNFLAAVLVALTF
GQIGPDTPETPNFLTQLAQNNWPSVLFAMAGGVTLSLGTLATQYGWAFVGLSVTEVMASS
LKVVIGTTLNYFLDGRINKAEILFPGVGCFLIAAILGSLVHASNAADNQEKLANSLAKYS
KNTRKNTADDEDLTKHLLNKEIPKDPEAAKPDAADQATEAPEKVEAGTAEFLVNLEEKRS
IKVLGSHTLLGLGIVVFAGVFYALFAPALNLSTNDQWHALPAGVPHLVVYTAYFYFSLAC
LAVSAALNVWLLYRPIMAGVPASSTVSAYLRDGGEGRAPAMLAGMVCGLGNAFTFMAGQA
AGYAAADSVQALPLVSTFWGVVLFGEYRRSSRRTYTLLASMLLMFTVAMVLLMASSNHRK
PL

Transcript Sequence

Transcript ID

OQU79178
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:49760626:49764366:-1 gene:SORBI_3008G105500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCCAGCTCCCCCTCCCAATCTCCATTCTCCTCATCACATATCCGCTCAGTCCCAGCTCAC
TCTGCCGATGAACCTTCCAGAGAGAGTGGCTCCACAAATAAGCCTGTACCCTGTAGACTG
CAGGCATACACACCAGCTCTTAGCCTCTTACATAGTATATAAAAACCGCGCCACGCTTGC
TGCAGAGAGCTCAAAAACCAACGCTGCTGCCAGGGCTTCTAACTGTTTCTTCCTTCTTGT
TTGGTATGCTGCCGCGGTCCCTTAAACATTTATTATGATGTTTCATCATGCTTGTTTCGA
ATAGTTTTCAACGTTGGATGAATGTTCCCTGTTTTGAAATTCAGTTATTTGGCTGAAATA
TGCTCTTTGTCGTGTGAGACTGCATGATGATTTGCTGTGGTCCGTCGGAGGACTTCTCTT
TGTGTGCATACTGTAGGCCTTCAGATTATTGGTTTTTACAGAACTGAACACCATGTCTGA
AAAACAAAATATTCTGTGTTAAACTTACAATACTGTGTTGTGTTATGAACATTTTTGAGT
TGCAGGCTTGTAACTATGCACTCATACTTGCCTTTTGAGTTGCAGCTCGTATATATTGCT
TTGGATTCAGAGTTTCTCTGTTTATCTCCTTTTGTCTTCCAAAAAGCAGGTTCAGAGTTT
CCCAGTCAAAAAACGGCAGGCAGATGAGTGGTGCATTTTATTACAGCTTATATATAGGAA
TTTCACCTTGACATATTTTGTTCTTCTTGCAGCGTTCATAGGATCTTAGATCTCTACAAA
CAGCATGCTGCAACCAATTATTAATATTTGACAGCAAGGGAGAAGCTATTCTTATACATG
TTAGACCTGTCTTCTTGGCAGCTCATGGACAGTAGTAACATCTTCCATAGTTTGACTAGA
ATTCTTTAGGACGATTTCATTAGATATATAGCCCTGCGTTCTCTGACTTCTTTTTGCCTA
AAATGCTACATCTACCTTTGCCTTTCGTTTGTGTGGTGAGATCAGTAAGCTTGAGTGCGT
GACTGACGAAGTTTGTTTGTTTTTGTTGCATTCGGTTGCGCTGCAAGAACAGAAGGGAAC
AGACGCCGAGATGTACCTGGTGAAGGACATTAGCGGCGCCATCGGGCTGATGGCGGTGGC
GTTGGTGCTCCTGGGCACCTGGCCGGTTGTCCTGGCGGTGCTAGAGCGGCGGGGCCGGCT
GCCGCAGCACACGTTCCTTGACTTCTCCGTCACCAACTTCCTGGCCGCCGTGCTCGTCGC
GCTCACCTTCGGCCAGATCGGCCCCGACACGCCGGAGACGCCCAACTTCCTCACCCAGCT
CGCTCAGAACAACTGGCCTTCGGTGTTGTTCGCGATGGCGGGCGGCGTCACCCTCAGCCT
GGGGACACTTGCCACGCAGTACGGCTGGGCGTTCGTCGGCCTTTCCGTCACTGAAGTCAT
GGCCTCAAGCCTCAAGGTCGTTATAGGGACGACGCTCAACTATTTCCTCGACGGCCGGAT
CAACAAGGCAGAGATCCTCTTCCCCGGTGTCGGCTGCTTCCTGATTGCGGCCATCCTTGG
GTCACTTGTCCACGCTTCCAATGCCGCCGACAACCAGGAAAAGCTGGCAAACTCCTTGGC
GAAGTACAGCAAAAATACAAGGAAGAACACTGCAGACGATGAGGATCTCACCAAACACCT
CCTTAACAAAGAGATACCAAAGGATCCAGAAGCTGCAAAGCCGGATGCAGCAGATCAGGC
TACTGAGGCCCCGGAGAAAGTAGAGGCAGGAACGGCAGAGTTCCTGGTTAACCTGGAGGA
GAAGAGATCGATTAAAGTGCTGGGTTCGCACACGCTGCTGGGCCTCGGGATCGTGGTGTT
CGCGGGCGTCTTCTACGCGCTGTTCGCGCCGGCGCTGAACCTGTCGACCAACGACCAGTG
GCACGCGCTCCCCGCCGGCGTGCCGCACCTGGTGGTGTACACGGCCTACTTCTACTTCTC
CCTCGCCTGCCTCGCCGTCAGCGCGGCGCTCAACGTGTGGCTCCTGTACCGGCCCATCAT
GGCCGGCGTGCCGGCGAGCTCCACCGTGTCCGCGTACCTCCGGGACGGCGGCGAGGGCAG
GGCGCCCGCGATGCTGGCGGGGATGGTGTGCGGGCTCGGGAACGCCTTCACGTTCATGGC
GGGGCAGGCGGCCGGGTACGCCGCCGCCGACTCCGTGCAGGCGCTGCCGCTCGTCAGCAC
CTTCTGGGGCGTCGTGCTGTTCGGCGAGTACCGCCGGTCGTCAAGACGCACGTACACGCT
GCTGGCCAGCATGCTGCTCATGTTCACCGTCGCCATGGTCCTCCTCATGGCTTCCTCCAA
CCACAGGAAGCCGCTCTGACTGACCTCCATCATCAGCAGGCGCTCCCATCGTCCACATCA
TCAGTGAGCTGGGCACGTGGATGGATATGCCGTAGTATGCGACGAGGAGAATGTAGATCG
GCAGCATGGGTCAGGTGGTGGGGCCCACTAGCTGAAACAGAGCTCAACTGCTAACGTCCA
CCCATTCTTCCAAGAAGTGTATGTACTGTACTCTGCTGCTCAACTGCTACAGGATTAGAT
CTGGTCCCTTTCTATCTTCTTTTGTGTATCACTGCCACATACTAGACTTTGTTTAGTTAT
AATTATCTATCCAATCATGAATTAATTAGACTCAAAAGATTCGTCTCACAAATTATAGAT
AAATTATGAAATTAGTTTTCATTTTTATTTATATTTAATGTTCTATGCATACGTATAATA
TGACGAATAATTAAAAAATTTTACAAATATCTATGGACACGGTTGCAAGTATTTACGAGA
CAGTTGCCTCCATCACATGCTAAGTTACATATGCCCGTTTTTTTCCTTAGGGCTTGTTTA
GATGCACCCAAAAACCTAAAACTTTACAAGATTTCCTGTCACATTGAATTTTACGGCAAA
TGCATGAAACATTAAATATAAATAGAAAAGATAACTAATTGCACAGTTTACCTGTAAATC
ACGAGATGAATCTTTTAAACCTAGTTACTCCATGATTGGACAATATTTATTAAATAAAAA
CGAAATTG