Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU79115
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:46461136:46466210:1 gene:SORBI_3008G097900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCAGGAATCAAGGACAGGCAATTTGACAATGAAGCCTGGCATCTTATGAGACTTAGC
CACCCAAATATAGTGCAACTTGTAGGCTACTGTTCTCACACAGAGGAAATACTAGTACTG
CATCAGGGGAAATACGTTTATGCTGAGAAGTCTGAAAGGTTGCTTTGCTTGGAATACCAG
CCTAAGGGAAGCCTTCATGAGCATCTTTCAGACGAATCTTCTGGACTTGATTGGGACTCA
CGCTACAAAATTATTGAGGGTATTTGCAATGGTTTGCATTATCTTCATGAGAAGTGGCAA
GCTAGCACCCCTATTATTCACATGGACCTAAAACCTAAGAACATATTGCTTGATGACAAT
ATGGTGCCAAAAATTGCTGACTTTGGTTTGTCGAGGCTTTTCGGTGAAGAGCAAACTCGA
ACTTGCACTGCAAGTCGTGATGGAACATTGGGTTACATGGCGCCAGAGTACTTAAATAGA
GGGCACAAGGACTACCCAGATGAGACTGACACATCATCCCAGGAATTTATTGAGCTGGTG
CTCAAGAATTGGAGAAATAGGCTGGAAAAAACACCGGGATATACAACTGCCTTTTCTATT
TTCCCATCTTTTTGCCGAGAAATTGATTACCAACGAATAAGAAGATGCATTCAGATTGGT
CTAGCCTGTGTGAAACTTAATCGGGCGAAAAGGCCAACAACACTTGAAGTTTTGAACATG
CTTCACAAATCAGAAGGTGCAGAATGCAGCAATGGAAAAGAGGATTATACTAATGAACGT
CCGGAAGAAGTGAATGGGCCTCTATACAACAAGGCTGAAGACAGATTGAATGGTACACAA
AATTTTGGTTCTTCTAAAGGAAAGAAGAGAGAGAGAGATGAGCGAGGAATTGATCCAGCT
AAGTTGCATCGAGATAGTCTGCATAACATCTATGACAGTGAGCCTGGAAGCTTTAAGTTG
GACGATATGGAGTCTAAAATAGCAAAGATAAAGAAAGGTGGACTTGCAAATGTAGAAGCA
GTGGAGGAGCTATTACATCTTATGAAACTTGATCAAACTGAGCAAAGAATAGACCTTTCT
GGTCGGGTTATACTTGCTGATGTTATTGCAGCCACAGAAAAACCTGATATCCTTCACGTA
TTTATGGAATCAAAGGGCCTTCTGGTGTTGGATAGTTGGCTTCAAGAGGCTCACAAATGG
AGGTCTGACGATGGTAGCAGTCCAAAAGAAGCAGATAAGCCTATTGGGCCAGGGGAATTT
TTTTTGGCCATGCTTCGTGCACTCGCTAGATTGCCTATCAATTTGAGTGCATTGCAGAGG
TGTAGCATTGGGAAAAGTGTTAATCGTCTGCGCGGACATAAAAATGTGGAGATTCAGAAG
AAGTCCAGATTACTTATTGAGGATGGGAAGCGACGTATTGATGCTGAAATGAAGTTAGGG
CGTGTTTGGTTGAGGACAAAACAAAATTAA

Peptide Sequence

PEP ID

OQU79115
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:46461136:46466210:1 gene:SORBI_3008G097900 transcript:OQU79115 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPGIKDRQFDNEAWHLMRLSHPNIVQLVGYCSHTEEILVLHQGKYVYAEKSERLLCLEYQ
PKGSLHEHLSDESSGLDWDSRYKIIEGICNGLHYLHEKWQASTPIIHMDLKPKNILLDDN
MVPKIADFGLSRLFGEEQTRTCTASRDGTLGYMAPEYLNRGHKDYPDETDTSSQEFIELV
LKNWRNRLEKTPGYTTAFSIFPSFCREIDYQRIRRCIQIGLACVKLNRAKRPTTLEVLNM
LHKSEGAECSNGKEDYTNERPEEVNGPLYNKAEDRLNGTQNFGSSKGKKRERDERGIDPA
KLHRDSLHNIYDSEPGSFKLDDMESKIAKIKKGGLANVEAVEELLHLMKLDQTEQRIDLS
GRVILADVIAATEKPDILHVFMESKGLLVLDSWLQEAHKWRSDDGSSPKEADKPIGPGEF
FLAMLRALARLPINLSALQRCSIGKSVNRLRGHKNVEIQKKSRLLIEDGKRRIDAEMKLG
RVWLRTKQN

Transcript Sequence

Transcript ID

OQU79115
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:46461136:46466210:1 gene:SORBI_3008G097900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTCTAGTTGATTTGAGGAAATTCTGCAACAATTTATCTTATGAGAGACTACTTGGTGAAG
GTGGTTTTGGTAAGGTGTATGAGCTAGAAGATTTGCAAAATATTACAAACAATTTCTCTG
AAGAGAGACTACTTGGTGAAGGTGGTTTTGGTAAGGTCTATAAGGTAAGATTAAATCATA
TATTTTTCATCCTCTCAATTATCTGCTCCTGTTTATGTCAATAAGAGAGTTTAAACAGGG
ACTGCTACCGAATGGGGATATAATTGCTGTGAAGAAGCTTACATCGACAATGCCAGGAAT
CAAGGACAGGCAATTTGACAATGAAGCCTGGCATCTTATGAGACTTAGCCACCCAAATAT
AGTGCAACTTGTAGGCTACTGTTCTCACACAGAGGAAATACTAGTACTGCATCAGGGGAA
ATACGTTTATGCTGAGAAGTCTGAAAGGTTGCTTTGCTTGGAATACCAGCCTAAGGGAAG
CCTTCATGAGCATCTTTCAGACGAATCTTCTGGACTTGATTGGGACTCACGCTACAAAAT
TATTGAGGGTATTTGCAATGGTTTGCATTATCTTCATGAGAAGTGGCAAGCTAGCACCCC
TATTATTCACATGGACCTAAAACCTAAGAACATATTGCTTGATGACAATATGGTGCCAAA
AATTGCTGACTTTGGTTTGTCGAGGCTTTTCGGTGAAGAGCAAACTCGAACTTGCACTGC
AAGTCGTGATGGAACATTGGGTTACATGGCGCCAGAGTACTTAAATAGAGGGCACAAGGA
CTACCCAGATGAGACTGACACATCATCCCAGGAATTTATTGAGCTGGTGCTCAAGAATTG
GAGAAATAGGCTGGAAAAAACACCGGGATATACAACTGCCTTTTCTATTTTCCCATCTTT
TTGCCGAGAAATTGATTACCAACGAATAAGAAGATGCATTCAGATTGGTCTAGCCTGTGT
GAAACTTAATCGGGCGAAAAGGCCAACAACACTTGAAGTTTTGAACATGCTTCACAAATC
AGAAGGTGCAGAATGCAGCAATGGAAAAGAGGATTATACTAATGAACGTCCGGAAGAAGT
GAATGGGCCTCTATACAACAAGGCTGAAGACAGATTGAATGGTACACAAAATTTTGGTTC
TTCTAAAGGAAAGAAGAGAGAGAGAGATGAGCGAGGAATTGATCCAGCTAAGTTGCATCG
AGATAGTCTGCATAACATCTATGACAGTGAGCCTGGAAGCTTTAAGTTGGACGATATGGA
GTCTAAAATAGCAAAGATAAAGAAAGGTGGACTTGCAAATGTAGAAGCAGTGGAGGAGCT
ATTACATCTTATGAAACTTGATCAAACTGAGCAAAGAATAGACCTTTCTGGTCGGGTTAT
ACTTGCTGATGTTATTGCAGCCACAGAAAAACCTGATATCCTTCACGTATTTATGGAATC
AAAGGGCCTTCTGGTGTTGGATAGTTGGCTTCAAGAGGCTCACAAATGGAGGTCTGACGA
TGGTAGCAGTCCAAAAGAAGCAGATAAGCCTATTGGGCCAGGGGAATTTTTTTTGGCCAT
GCTTCGTGCACTCGCTAGATTGCCTATCAATTTGAGTGCATTGCAGAGGTGTAGCATTGG
GAAAAGTGTTAATCGTCTGCGCGGACATAAAAATGTGGAGATTCAGAAGAAGTCCAGATT
ACTTATTGAGGATGGGAAGCGACGTATTGATGCTGAAATGAAGTTAGGGCGTGTTTGGTT
GAGGACAAAACAAAATTAAGGTGTGGCGAAATCGATAACATAGATATAAAAAATTTCTCA
TTGGTTTATACACATATATATGTATTTATAATTGTCATCTACTATATAAGTAAAACTATT
TTGAATAAATAAAAAGATACAAGGATAGTCAGTAGACTAACCAATTGTGGATGAACATCA
ATTGGTTTTTCCTTTCGGATCCATCGTTAAGACGAAGGCCTTGTTTAGTTGTGAAAACTT
TTTGGATTTCGTTACTGTAGTATTTTTGTTTTTATTTGACAAACATTGTCCAATCATGGA
GTAACTAAGCTTAAAAAATTTGTCTCGTGATTTACAGACA