Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU79078
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:39668501:39691345:1 gene:SORBI_3008G092300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGACGCCGACGCCAAGCCCCCGCCCCCCGACGCCGCGGCGTCCCCGGTTCCCTCG
ATCTCGCCCTCCTCTGTAGGCGCCGGGAACGCGGTCGACGCAGACGCGATCGAGAAGCAG
CTCGCCGGCCTGGGCATCGCCGTCGCCGGCAACGGCGGCGGGTTCCCCGAGCCATCGGGC
TGGGACGATGGCCCCGTGCCAGTCCGCATCCCGGCTGCCGTCCTTGTCGGCCGTGATGAG
GGTGCCGACGAGAAGCCGCCGGCGCCGGCGCCGACGGGGGCAGTGGATGTGAAGTTGCGG
TTCCCGCGCCGGCCCGGAGAGCCTGACTGCAGCTACTACCTCAAGTTCGGCACCTGCCGC
TTCGGGATCAAGTGCAAGTTCAACCACCCTGCGAGGAAGAAGAAGAGTAGTAGGGTGAGA
GGCAGTGGGAGCAACAGCAGCAGCAATAAAGCATCGTCTCCTGATGATGATCAGGCTCCT
AGAGAAGAATACGAAGGCCTTGTTCCAGACATTTCGGATTCCATGGGCTTTGATGACAAG
GGGAGCTTATCTAGCTCAGAAATCTATAGGAAGATGTCATATGAAGTTATTGATATGGAA
AGAGGGAAACTAGAGCCAAAGGAAAAGGGTGCTAAAGATAAAAGAAAGGAAACCTTTGCA
GAAGGCAACGCTCAGGAGGAATGCAAGTATTATTCAACATCTGGAGGATGCAAATTTGGT
AAAGCTTGCAAATACCTCCACCGTGAGGGAAAAGAAGCGAAAACAGAGGTTGAAAAAGCT
GAGCTGAACTTTCTAGGTCTTCCACTGCGACCAGGTGAAAAGGAGTGTCCATACTATATG
CGCACTGGGAGCTGCAAATTTGCGACTAACTGCAAGTTTCACCACCCAGATCCTACTAAC
GCGTCTTCAAAAGAACCAGGGTTGGAACATGAGAATGCGGATACACCACTGCAAAATGTC
CAAGGATCCTGTCAGCCTAGCCTTCAGATATGGCCTGATCACAGAACATTGAATGAACAG
CATGTTCCTTTTCTAGCTCCAGCACAGTCATACGGTGGAGGGATGGTTCCACCTCAAGGA
ATGTATCCATCTCCTGATTGGAGTGGATATCATCAGGTACCTTTGAATCCATATTACCCT
CCTGGTGTCCCTTTTCCGCATTTTCCAGCTGCCCATATGAATCACCCGATGTACAAGGCT
GCAGATGTACCAGGAAATCAACCACCACCTTCTGATGAGTATCCTGAGAGACCTGGCCAA
CCTGAATGCCAGCATTTTATTAAGAGCGGTTTCTGTAAATACAGGATGAAATGCAGATTT
CACCATCCAAGGTCGGGCCAGTCTGCACCTCTAACAGGTCTTAGCCCCATCGGCTTGCCT
ATCAAACCTGATCAACCTGTGTGCACGTATTATGGCCGCTATGGTTTTTGCAAGTATGGG
CCAGCTTGCATGTTCAACCACCCCTTCAACTTCGGTCCTCCTGTGCCGGCAGCAGGACCA
CCCCTCCCCGGGCAATACCCAACACCTGGAAACTTCACTGTCTAG

Peptide Sequence

PEP ID

OQU79078
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:39668501:39691345:1 gene:SORBI_3008G092300 transcript:OQU79078 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MADADAKPPPPDAAASPVPSISPSSVGAGNAVDADAIEKQLAGLGIAVAGNGGGFPEPSG
WDDGPVPVRIPAAVLVGRDEGADEKPPAPAPTGAVDVKLRFPRRPGEPDCSYYLKFGTCR
FGIKCKFNHPARKKKSSRVRGSGSNSSSNKASSPDDDQAPREEYEGLVPDISDSMGFDDK
GSLSSSEIYRKMSYEVIDMERGKLEPKEKGAKDKRKETFAEGNAQEECKYYSTSGGCKFG
KACKYLHREGKEAKTEVEKAELNFLGLPLRPGEKECPYYMRTGSCKFATNCKFHHPDPTN
ASSKEPGLEHENADTPLQNVQGSCQPSLQIWPDHRTLNEQHVPFLAPAQSYGGGMVPPQG
MYPSPDWSGYHQVPLNPYYPPGVPFPHFPAAHMNHPMYKAADVPGNQPPPSDEYPERPGQ
PECQHFIKSGFCKYRMKCRFHHPRSGQSAPLTGLSPIGLPIKPDQPVCTYYGRYGFCKYG
PACMFNHPFNFGPPVPAAGPPLPGQYPTPGNFTV

Transcript Sequence

Transcript ID

OQU79078
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:39668501:39691345:1 gene:SORBI_3008G092300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CTCCTCTCTCTCTCTCTAGGGTTTTTTTCCCCACTTCGCTTTGCTTCCCCACCTGCTCTA
TCTCCACTTGTCCCCATCACCGTCGCCATCAACCACCCCTCTCTCCTCTCTCATCGGCTC
CAATGGCGGACGCCGACGCCAAGCCCCCGCCCCCCGACGCCGCGGCGTCCCCGGTTCCCT
CGATCTCGCCCTCCTCTGTAGGCGCCGGGAACGCGGTCGACGCAGACGCGATCGAGAAGC
AGCTCGCCGGCCTGGGCATCGCCGTCGCCGGCAACGGCGGCGGGTTCCCCGAGCCATCGG
GCTGGGACGATGGCCCCGTGCCAGTCCGCATCCCGGCTGCCGTCCTTGTCGGCCGTGATG
AGGGTGCCGACGAGAAGCCGCCGGCGCCGGCGCCGACGGGGGCAGTGGATGTGAAGTTGC
GGTTCCCGCGCCGGCCCGGAGAGCCTGACTGCAGCTACTACCTCAAGTTCGGCACCTGCC
GCTTCGGGATCAAGTGCAAGTTCAACCACCCTGCGAGGAAGAAGAAGAGTAGTAGGGTGA
GAGGCAGTGGGAGCAACAGCAGCAGCAATAAAGCATCGTCTCCTGATGATGATCAGGCTC
CTAGAGAAGAATACGAAGGCCTTGTTCCAGACATTTCGGATTCCATGGGCTTTGATGACA
AGGGGAGCTTATCTAGCTCAGAAATCTATAGGAAGATGTCATATGAAGTTATTGATATGG
AAAGAGGGAAACTAGAGCCAAAGGAAAAGGGTGCTAAAGATAAAAGAAAGGAAACCTTTG
CAGAAGGCAACGCTCAGGAGGAATGCAAGTATTATTCAACATCTGGAGGATGCAAATTTG
GTAAAGCTTGCAAATACCTCCACCGTGAGGGAAAAGAAGCGAAAACAGAGGTTGAAAAAG
CTGAGCTGAACTTTCTAGGTCTTCCACTGCGACCAGGTGAAAAGGAGTGTCCATACTATA
TGCGCACTGGGAGCTGCAAATTTGCGACTAACTGCAAGTTTCACCACCCAGATCCTACTA
ACGCGTCTTCAAAAGAACCAGGGTTGGAACATGAGAATGCGGATACACCACTGCAAAATG
TCCAAGGATCCTGTCAGCCTAGCCTTCAGATATGGCCTGATCACAGAACATTGAATGAAC
AGCATGTTCCTTTTCTAGCTCCAGCACAGTCATACGGTGGAGGGATGGTTCCACCTCAAG
GAATGTATCCATCTCCTGATTGGAGTGGATATCATCAGGTACCTTTGAATCCATATTACC
CTCCTGGTGTCCCTTTTCCGCATTTTCCAGCTGCCCATATGAATCACCCGATGTACAAGG
CTGCAGATGTACCAGGAAATCAACCACCACCTTCTGATGAGTATCCTGAGAGACCTGGCC
AACCTGAATGCCAGCATTTTATTAAGAGCGGTTTCTGTAAATACAGGATGAAATGCAGAT
TTCACCATCCAAGGTCGGGCCAGTCTGCACCTCTAACAGGTCTTAGCCCCATCGGCTTGC
CTATCAAACCTGATCAACCTGTGTGCACGTATTATGGCCGCTATGGTTTTTGCAAGTATG
GGCCAGCTTGCATGTTCAACCACCCCTTCAACTTCGGTCCTCCTGTGCCGGCAGCAGGAC
CACCCCTCCCCGGGCAATACCCAACACCTGGAAACTTCACTGTCTAGCAGGCATGGGATG
AGCGATTTTTCTGAGGTCACCATGAATGCTCGTAATAACTTCCACTTGTAAAATAGCGTA
GACAAGCTGTACGTGGTTGGCGGTAGACATCCAGCATGTAGGCGCAACAAAGTTGCATGG
AGCTGGGTACATTACAGTTGGTATTCATGGAAACGGATCGAACCTGTGATAGTATTGCAA
ACTTTATGCTGTACAGCAAGTTACAGTTCGTACATAATCTGCCATTGCATTTAGAATCCT
GATTGCTAGATGCATGTTTTGGTTGCGTAATAAGTTGTTATCAAAGTTTGGTCATACGTG
GGCAAGGGTTTTGTGGAATTATATCTTCTCCGTGCTCAAATGGTTTCATGGCTGAGTGGC
AGAATTTAACAGAAGGTCATTACATATAGCCCTTGAATGTCAAGTGAACTCATAATTGAG
AAAGGGCCCAAAACCGGGGAAATATCTCATTCTTTGCTATTATATTATAAATATCTCATT
CTTTGTCATTCTATTATAAATTATGACGTTGACTTTTCTAGGTATAATTATGTTATGTGC
TTACATAGTTAAAATAATGTTTGTAGAAAAGCTTAAACTTCTTATAATTTGAAATGGAGT
AAATATAAAATGAGTTTATTAGAGGAATAGGTTTATATGTCTCCTCAATTCTTGGGTTTG
TATAGTTTTTACCCTCAGTTTTAGTGCTATTTTGTTCTGTGCTAAAATTTCTATGATTTT
CTAAACATAGTAACCTAGCTCAGACAAGAATGGACACAAATTTAGAGAACGTATCATCTG
CATGTTCATACACAGTGGATAGACTTGATGGATGGCTAGAAATTTGACCATAGCCTTTTG
TGTTTATCTAGAAAAGGTGTGGTTTGATATTCTAAATTGATTCTTCATGTGGTTTAATGG
AATGAATTTTGTAGCAAATAAGTATTGCTTGTTGGGAGTGCAAAGGGTTAAATAGCATAT
TAGGACTTTTAATGAGTGTTAAAGAAATGAGTATTTTACACGGTTGTTTGGATTAATAAC
CAAAGACCGTAGATTCTGTTTGAGTTTGGATGTAAAATGGAAATG