Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU78916
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:9453581:9458214:-1 gene:SORBI_3008G071200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGACGCAGACACGTTCCCAGCGGGACTGCGTGTGCTTGCCGTCGATGATGACCGTGTC
TGCCTCAAGATCCTAGAGAGGCAACTCAAATATTGCAACTACAACGCAACGGTGGTGTCG
GACGCCAGGACGGCATTGGACATGCTCAGGGAGAGAAAGGAGGGGAACCAGTTTGACCTG
GTGATCAGCGACGTCATCATGCCCAACATGGACGGCTTCAAGCTCCTTGAGCTCATCGGC
CTGGAGATGGATCTCCCAGTCATCATGCTATCCGCAAACAGCGAGACACAAACTATTATG
AAAGGGATAAAGCATGGGGCATGTGATTATATGGTAAAACCAGTGCGCCTTGAACAACTT
AGGGGCATATGGACACACGTGGTGAAGAATAGTATGAATGATCCACAGAACAACATCAAC
AGTGGCAGTGATGATGATGTTCAGAAGTTACGATATGGGAATGGTGATAAAGGTATGAAG
GATGGAGCAAACCATAGAAACAAGTATTCAAAGAAAAACAAAAAGGTTGTGGATGTTGCT
GATGAGGACAGCGAGAACACATCAGCCCAGAAGAAGCAAAGGGTCCAGTGGTGTGGTCAA
CTACATCAGAAGTTTGTAGAAGCTGTCAGTCAGATTGGCATCGACAGGGCTGCTCCAAAG
AAGATATTAGCAATCATGAATGTGGAAGGTCTTACTAGAGAGAATGTCGCTAGTCATCTG
CAGAAGTACCGAATCTATCTCAGAAAGCTCGGTGATGGCAAACTAAGGAATTCTAATCCG
TTTGCTGATGAAACTGAAGCGTTGCGGGGAAACATGTATGGCCCCACCTTCATTGGCTCT
CCGAGATCAAGAAACCATTCTTTGCCTCGTTCTTGCAGCTCCTATGCGAGTATATTGCGT
GGAAAGATTTTGGGATCAAGCAGAGGTATTCCTTATGAAGACATAGCAAATGGTGACATA
CTGGCTCCTTCCGGCCATTTACCATTGCAATCTCCCGAGTTGGTGAAACAGCCTTCGGTT
CAGCTTCAATCATGTTCTGCTGGCCAATTTAACGAGGTTGCTAGGGAAGTTCACCAATTT
GCAGGACCTAGCAACTCTTGGAAAGCTGATGTGCCATCAAGGTTTTCTGATCTTGGTCAT
GATGTTGGAAAGCCTGAAGATCCTACACAGGATAACATTTTCAAGATCAACCAGTTGTCT
AGACTTGCACACTCCTCTGGACAGGTACCAACTTTTGGAAATGAGTATCAGAAAAAAATC
ACAGGAATCATGGGGAAAGACGTACCAGTAGAGCAGGTGGCACCATTTAGCTTTGGGAAC
AATACACACTCTACATTGACACCGAACGGCAATTCTGCTTTGGCTATTTCTTCAAGCACT
AGACCTGACCTTCAGATAGACAATTCTGCAATGCTGACCCAGGTGCTGAATGGCGGTGGT
GCAAGTGACAACCACCATGATGGTAGCACCATTAATCATCAAGCTGTTAGTGACCAACTG
AATAACATCAATGAATTCCTCATGGGAACAAGTGAGGCACAGAATGTGGAGAGTGATGAC
TTGGATGATTTCCTTGCTTCCTTGGTTAATCAAGATTTCATCAACAATGATGATTCTTTG
ATTGACAGGGACTGGGAATTTGCCCCTTTACTCTAG

Peptide Sequence

PEP ID

OQU78916
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:9453581:9458214:-1 gene:SORBI_3008G071200 transcript:OQU78916 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDADTFPAGLRVLAVDDDRVCLKILERQLKYCNYNATVVSDARTALDMLRERKEGNQFDL
VISDVIMPNMDGFKLLELIGLEMDLPVIMLSANSETQTIMKGIKHGACDYMVKPVRLEQL
RGIWTHVVKNSMNDPQNNINSGSDDDVQKLRYGNGDKGMKDGANHRNKYSKKNKKVVDVA
DEDSENTSAQKKQRVQWCGQLHQKFVEAVSQIGIDRAAPKKILAIMNVEGLTRENVASHL
QKYRIYLRKLGDGKLRNSNPFADETEALRGNMYGPTFIGSPRSRNHSLPRSCSSYASILR
GKILGSSRGIPYEDIANGDILAPSGHLPLQSPELVKQPSVQLQSCSAGQFNEVAREVHQF
AGPSNSWKADVPSRFSDLGHDVGKPEDPTQDNIFKINQLSRLAHSSGQVPTFGNEYQKKI
TGIMGKDVPVEQVAPFSFGNNTHSTLTPNGNSALAISSSTRPDLQIDNSAMLTQVLNGGG
ASDNHHDGSTINHQAVSDQLNNINEFLMGTSEAQNVESDDLDDFLASLVNQDFINNDDSL
IDRDWEFAPLL

Transcript Sequence

Transcript ID

OQU78916
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:9453581:9458214:-1 gene:SORBI_3008G071200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AAGAGATGGACGCAGACACGTTCCCAGCGGGACTGCGTGTGCTTGCCGTCGATGATGACC
GTGTCTGCCTCAAGATCCTAGAGAGGCAACTCAAATATTGCAACTACAACGCAACGGTGG
TGTCGGACGCCAGGACGGCATTGGACATGCTCAGGGAGAGAAAGGAGGGGAACCAGTTTG
ACCTGGTGATCAGCGACGTCATCATGCCCAACATGGACGGCTTCAAGCTCCTTGAGCTCA
TCGGCCTGGAGATGGATCTCCCAGTCATCATGCTATCCGCAAACAGCGAGACACAAACTA
TTATGAAAGGGATAAAGCATGGGGCATGTGATTATATGGTAAAACCAGTGCGCCTTGAAC
AACTTAGGGGCATATGGACACACGTGGTGAAGAATAGTATGAATGATCCACAGAACAACA
TCAACAGTGGCAGTGATGATGATGTTCAGAAGTTACGATATGGGAATGGTGATAAAGGTA
TGAAGGATGGAGCAAACCATAGAAACAAGTATTCAAAGAAAAACAAAAAGGTTGTGGATG
TTGCTGATGAGGACAGCGAGAACACATCAGCCCAGAAGAAGCAAAGGGTCCAGTGGTGTG
GTCAACTACATCAGAAGTTTGTAGAAGCTGTCAGTCAGATTGGCATCGACAGGGCTGCTC
CAAAGAAGATATTAGCAATCATGAATGTGGAAGGTCTTACTAGAGAGAATGTCGCTAGTC
ATCTGCAGAAGTACCGAATCTATCTCAGAAAGCTCGGTGATGGCAAACTAAGGAATTCTA
ATCCGTTTGCTGATGAAACTGAAGCGTTGCGGGGAAACATGTATGGCCCCACCTTCATTG
GCTCTCCGAGATCAAGAAACCATTCTTTGCCTCGTTCTTGCAGCTCCTATGCGAGTATAT
TGCGTGGAAAGATTTTGGGATCAAGCAGAGGTATTCCTTATGAAGACATAGCAAATGGTG
ACATACTGGCTCCTTCCGGCCATTTACCATTGCAATCTCCCGAGTTGGTGAAACAGCCTT
CGGTTCAGCTTCAATCATGTTCTGCTGGCCAATTTAACGAGGTTGCTAGGGAAGTTCACC
AATTTGCAGGACCTAGCAACTCTTGGAAAGCTGATGTGCCATCAAGGTTTTCTGATCTTG
GTCATGATGTTGGAAAGCCTGAAGATCCTACACAGGATAACATTTTCAAGATCAACCAGT
TGTCTAGACTTGCACACTCCTCTGGACAGGTACCAACTTTTGGAAATGAGTATCAGAAAA
AAATCACAGGAATCATGGGGAAAGACGTACCAGTAGAGCAGGTGGCACCATTTAGCTTTG
GGAACAATACACACTCTACATTGACACCGAACGGCAATTCTGCTTTGGCTATTTCTTCAA
GCACTAGACCTGACCTTCAGATAGACAATTCTGCAATGCTGACCCAGGTGCTGAATGGCG
GTGGTGCAAGTGACAACCACCATGATGGTAGCACCATTAATCATCAAGCTGTTAGTGACC
AACTGAATAACATCAATGAATTCCTCATGGGAACAAGTGAGGCACAGAATGTGGAGAGTG
ATGACTTGGATGATTTCCTTGCTTCCTTGGTTAATCAAGATTTCATCAACAATGATGATT
CTTTGATTGACAGGGACTGGGAATTTGCCCCTTTACTCTAGAAGAGAGATGTTTCTGCAT
TGCCTAGCTTCTGACAGTTCATGGTTCTCGCATGTTGTGTATGTGCAAATTTGCACTATT
TGTAGTAGGCCAGCTAGGAGTAGGCCATCTTGGATGGAATC