Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU78729
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:3818743:3823993:1 gene:SORBI_3008G039501 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGACGAGTTCTTGTACCAGTCGCTCCTCCTCTCCGTCGTCGCCGTCACGCTGCTGCAG
CTGGTGAAGCTGGCCTTCATCAAGCGGAGGCCACGGCTGCCGCCGGGGCCCTGGAAGCTG
CCGGTGATTGGCAGCATGCACCACCTCATCAACGTGCTGCCGCACCGCGCGCTACGGGAC
CTGGCGGCCGTCCACGGCCCGCTCATGATGCTGCAGCTCGGCCAGACGCCGCTCGTCGTC
GCCTCGTCCAAGGAGACGGAGCGCGCCGTGCTCAAGACCCACGACACCAACTTCGCCACG
CGGCCCAAGCTCCTCGCCGGCCAGATCGTCGCGTACGAGTGGCTCGACATCCTCTTCGCC
CCCTCCGGCGACTACTGGCGCAAGCTCCGTCAGCTCTGTGCTGCCGAGATCCTTAGCCCT
AAGCGGGTGCTCTCCTTTCGCCACATCCGGGAGGACGAGGTGATGCTGCGGGTCGAGGAG
ATCCGCGCGGCGGGGCCGTCGACGCCGGTGAACCTGAGCGTGATGTTCCACAGCATCACC
AACAGCGTCGTGTCCCGGGCGGCATTCGGGAAGAAGCGGAAGAACGCGGCGGAGTTCCTG
GCGGCGACCAAGGCCGTCGTCGGCCTGTCGAGCGGCTTCAACATCCCGGACCTGTTCCCG
GGGTGGACCACCGTGCTGGCAAGGCTCACCGGCATGACGCGCAGCCTCAAGGACATCCAC
AAGACGGTGGACACCATCCTCGAGGAAATTATCCAGGAGCGCAAGGCCATCCGCGATGAG
AAGATCAGTAGCGGCGCCGAGGACGTCGACGAGAACCTCGTCGACGTGCTCCTCGGCCTG
CAAGAGAAAGGCGGCTTCGGCTTCCAGCTCAACAACAGCATCATCAAGGCCATCATACTG
GACATGTTCGCGGGCGGGACGGGGACATCAGGGTCAGCCATGGAGTGGGGGATGTCGGAG
CTGATGCGGAATCCGGAGGTGATGAAGAAGCTGCAGGGGCAGATCAGGGAGGCATTTCGG
GGGAAGACGGTGGTGACGGAGGGCGACCTGCAGCAGGCCAGCAACCATGGCCTTATGTAC
ATGAAGCTGGTGATCAAGGAAACCCTGCGGCTGCACCCGCCGGCACCGCTGCTGGTGCCC
CGGGAGAGCATCGAGGAGTGCGAGCTTGACGGGTACACGATCCCAGCAAAGTCACGCGTC
ATCATCAACGCATGGGCCATCGGCCGCGACCCTAGGTACTGGGAGGACGCCGACGAGTTC
AAGCCGGAGCGGTTCGAGGACGGCTCCCGGGACTTCACCGGCGGCAGCTACGAGTTCTTG
CCCTTTGGGTCTGGTCGGAGGATGTGCCCTGGCTTCAACTACGGGCTCGCCAGCATGGAG
CTCGCCTTCGTCGGGCTGCTCTACCACTTCGATTGGTCGCTGCCCGACGGCGTCAAGGAG
GTCGAGATGGGGGAGGCGCCTGGACTCGGTGTCCGCCGCCGCACACCACTGCTGCTCTGC
GCCACCCCGTTCGTCCCGGTCGACGCCGTGAAGCATGGCTAG

Peptide Sequence

PEP ID

OQU78729
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:3818743:3823993:1 gene:SORBI_3008G039501 transcript:OQU78729 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDEFLYQSLLLSVVAVTLLQLVKLAFIKRRPRLPPGPWKLPVIGSMHHLINVLPHRALRD
LAAVHGPLMMLQLGQTPLVVASSKETERAVLKTHDTNFATRPKLLAGQIVAYEWLDILFA
PSGDYWRKLRQLCAAEILSPKRVLSFRHIREDEVMLRVEEIRAAGPSTPVNLSVMFHSIT
NSVVSRAAFGKKRKNAAEFLAATKAVVGLSSGFNIPDLFPGWTTVLARLTGMTRSLKDIH
KTVDTILEEIIQERKAIRDEKISSGAEDVDENLVDVLLGLQEKGGFGFQLNNSIIKAIIL
DMFAGGTGTSGSAMEWGMSELMRNPEVMKKLQGQIREAFRGKTVVTEGDLQQASNHGLMY
MKLVIKETLRLHPPAPLLVPRESIEECELDGYTIPAKSRVIINAWAIGRDPRYWEDADEF
KPERFEDGSRDFTGGSYEFLPFGSGRRMCPGFNYGLASMELAFVGLLYHFDWSLPDGVKE
VEMGEAPGLGVRRRTPLLLCATPFVPVDAVKHG

Transcript Sequence

Transcript ID

OQU78729
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:3818743:3823993:1 gene:SORBI_3008G039501 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGCAAGGAAGATTAGCAAGCACTAGCGAGGTCTAGCTGCGTGTCCTAGCTAGCTATAGCT
AGTTTCTGTAGTTACTCCCCCTGTTTCTTTGTTATATTATTAGGCATATTGGTATTTGTA
GTGTAGTCTTTAGAATCATACTTCTACCATCAATCACTTGTATACGATACATCATCAATT
CCTTCAAAAATAGCTTTGTAGGAGTACTGCTAATGTAAACACACATGAAATTTGAATCTG
TTGAAACAACCTTTACTATCTGCTAACTATGCATGTAATTTAATTAGTAATCATTACTAG
TTAAAATCAGTGAAGTTTGACCTTTTGGAATTATATTATGCCTTGTTATTATTTGAAATG
GAGGGAGTACAAGCTGATTAGGGAGATATATATATAGCTAATTAAACTATAGCTAACGTA
CATGCAGGTACTGCGGTAGCCATGGACGAGTTCTTGTACCAGTCGCTCCTCCTCTCCGTC
GTCGCCGTCACGCTGCTGCAGCTGGTGAAGCTGGCCTTCATCAAGCGGAGGCCACGGCTG
CCGCCGGGGCCCTGGAAGCTGCCGGTGATTGGCAGCATGCACCACCTCATCAACGTGCTG
CCGCACCGCGCGCTACGGGACCTGGCGGCCGTCCACGGCCCGCTCATGATGCTGCAGCTC
GGCCAGACGCCGCTCGTCGTCGCCTCGTCCAAGGAGACGGAGCGCGCCGTGCTCAAGACC
CACGACACCAACTTCGCCACGCGGCCCAAGCTCCTCGCCGGCCAGATCGTCGCGTACGAG
TGGCTCGACATCCTCTTCGCCCCCTCCGGCGACTACTGGCGCAAGCTCCGTCAGCTCTGT
GCTGCCGAGATCCTTAGCCCTAAGCGGGTGCTCTCCTTTCGCCACATCCGGGAGGACGAG
GTGATGCTGCGGGTCGAGGAGATCCGCGCGGCGGGGCCGTCGACGCCGGTGAACCTGAGC
GTGATGTTCCACAGCATCACCAACAGCGTCGTGTCCCGGGCGGCATTCGGGAAGAAGCGG
AAGAACGCGGCGGAGTTCCTGGCGGCGACCAAGGCCGTCGTCGGCCTGTCGAGCGGCTTC
AACATCCCGGACCTGTTCCCGGGGTGGACCACCGTGCTGGCAAGGCTCACCGGCATGACG
CGCAGCCTCAAGGACATCCACAAGACGGTGGACACCATCCTCGAGGAAATTATCCAGGAG
CGCAAGGCCATCCGCGATGAGAAGATCAGTAGCGGCGCCGAGGACGTCGACGAGAACCTC
GTCGACGTGCTCCTCGGCCTGCAAGAGAAAGGCGGCTTCGGCTTCCAGCTCAACAACAGC
ATCATCAAGGCCATCATACTGGACATGTTCGCGGGCGGGACGGGGACATCAGGGTCAGCC
ATGGAGTGGGGGATGTCGGAGCTGATGCGGAATCCGGAGGTGATGAAGAAGCTGCAGGGG
CAGATCAGGGAGGCATTTCGGGGGAAGACGGTGGTGACGGAGGGCGACCTGCAGCAGGCC
AGCAACCATGGCCTTATGTACATGAAGCTGGTGATCAAGGAAACCCTGCGGCTGCACCCG
CCGGCACCGCTGCTGGTGCCCCGGGAGAGCATCGAGGAGTGCGAGCTTGACGGGTACACG
ATCCCAGCAAAGTCACGCGTCATCATCAACGCATGGGCCATCGGCCGCGACCCTAGGTAC
TGGGAGGACGCCGACGAGTTCAAGCCGGAGCGGTTCGAGGACGGCTCCCGGGACTTCACC
GGCGGCAGCTACGAGTTCTTGCCCTTTGGGTCTGGTCGGAGGATGTGCCCTGGCTTCAAC
TACGGGCTCGCCAGCATGGAGCTCGCCTTCGTCGGGCTGCTCTACCACTTCGATTGGTCG
CTGCCCGACGGCGTCAAGGAGGTCGAGATGGGGGAGGCGCCTGGACTCGGTGTCCGCCGC
CGCACACCACTGCTGCTCTGCGCCACCCCGTTCGTCCCGGTCGACGCCGTGAAGCATGGC
TAGATATATACATAATACATCGTCGTCGTCTTAGCCCTTGAGAGCACGTGCTGTGAACCT
CCAACCCATTGGATTCGTATTGAAAAGTGTGTAAATATATATCTTAATGTACTTTTATAT
TGAGATATATGTTTGCACATTTTTTAATGCGAATCTAATGGATGAGAGAGTAAGAACATG
TGCTCTCAAGTGCAGGAAAAAACTTTACAGTAGCCGCCCATGGCGGCCCAGCTACGTACT
TTCTGGCGACTATATGCAACCAAAGCTAGCTGCATGCAACGCGATCGACGTGTGTGCATG
TGCTGGCCACACGTACTACGACACGACGTGTCTATCTCAGCTAGTATGTACGCGTCTTCC
AAAAGCGTCTACCTACCTAAAGTTTGTACTTCCATTGTAACGTGTGGTGTGTCCTCAGCA
ATA