Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU78668
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:2396183:2400314:-1 gene:SORBI_3008G026600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTAGTGGACTCCAAGGACCCAGATCTCCTAAAGCTGGAGCTTGTAAATGTACCAGGG
GGAGCTTTTGCATTCGAACTTGCTGCCAAGTTCTGTTACGGTAGCAATTTCGAAATAACC
ACGGGAAATGTGGCCCATCTGCGATGCGTTGCAGAGTACTTGGAAATGACGGAGGACTAT
CAAGAGGAGAACCTCATTTTCAGGACAGAGACGTACTTGAACGAGATCGTGCTCAAGAAC
CTCGATAAATCCCTGGAAGTCCTTTGTAAATGTGATGGATTGGACCCAGTAGTGGAGGAA
GTCGGGCTTGTTGATAGGTGTGTCGATGCAATCGCGGTGAATGCAAGTAAGGAGCAGCTG
GTTTCAGGTTTGGCTCACTTGGAATGTGATGTGGGATCTGCAAAGCTGCGTATGCACTGC
CAGGATTGGTGGGTTGAAGACCTTTCTGCATTGAGAATTGACCACTATCGGCGTGTGATT
GCTGCAATGAGAAGAAATGGGGTCAGGCCTGAGAGTATTGGCACCTCTATTACTCACTAT
GCCCAAACATCACTCAAGGGTGTCGAAAGACGACATGTATGGGACTCAGGTCCCTTTGTC
GGAGACAGTCAAAGAATGATTGTTGAGACACTCATCGATCTGTTAGCGACTGAAAATATT
ACAACGGTTACTTTATCCTTCCTGTTTGGCATGCTGAGAATGGCAATTGAAGTTGATGCA
AGCCTAGACTGCAGAATCGAAGTCGAGAAAAGGATTGGCCTTCAGCTGGAGATGGCATCA
CTAGATGATCTGCTGATCCCCTCCACGCAAACAAGTGACTCGATGTTTGACGTTGACACT
GTCCACCGTATATTGGTGAACTTCTTGCAGAGGATAGACGAAGATAGTTCAGGAGAGTTG
TCACCTTGTGGATATGACTCTGACGGACTCAAGTCTCCAAGCCACAGTTCAGTCCTGAAG
GTTGGAAGACTAATGGATGGTTATCTTGCAGAGGTAGCACCAGATCCCTATCTGAAACTG
CAGAAGTTCATGGCTCTGATTGAACTGTTGCCAGATTATGCACGCATTGTTGATGATGGA
CTCTATCGTGCCATCGACATATACCTGAAGGCGCATCCATCTCTGACGGAGTCGGAGTGC
AAGAAGCTGTGCAAGCTGATCGACTGCCAGAAGCTGTCGCAGGACGCGTCGAGCCACGCG
GCGCAGAACGACCGGCTGCCGATCCAGATGGTGGTGCGCGTGCTCTACTTCGAGCAGCTC
CGCCTCAAGTCGTCCTTCTCAGGCGGCGGGTCCGGGTGCGTGAGCGGCCTCGGGCTGGGC
GCCGACGGGTCCCTGTCGCAGCGGTTCGTGTGCAGCAGCAGCGGCGTGCCGAGCTCGTGC
GTGTCGCCGCAGCGGGACAACTACGCGTCGCTGCGGCGGGAGAACCGGGAGCTGAAGCTG
GAGATCTCGCGGATGCGGGTGCGGCTGACGGAGCTGGAGCGGGAGCAGGGGCTGATGAAG
CAGCAAGGGAGGATGCGCGGCGGGGACGGCGGCGGGCGGCACGGCGGGGAGCAGGGCCGC
GCGTTCCTCGCGTCGCTGTCGAGGGGCTTCGGCCGCATCACCATGTTCGGCGTCGGCGGC
GGGCCCGCGGCGGCGGACAGGAGAAGGAAGAAGAGCGGCGGCAGGAGCTCCCAGTGCTCC
GACGGCAAGGCTCGCAGGCGGCACAAGGCGTCCTTCGCCTACGACTGA

Peptide Sequence

PEP ID

OQU78668
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:2396183:2400314:-1 gene:SORBI_3008G026600 transcript:OQU78668 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVVDSKDPDLLKLELVNVPGGAFAFELAAKFCYGSNFEITTGNVAHLRCVAEYLEMTEDY
QEENLIFRTETYLNEIVLKNLDKSLEVLCKCDGLDPVVEEVGLVDRCVDAIAVNASKEQL
VSGLAHLECDVGSAKLRMHCQDWWVEDLSALRIDHYRRVIAAMRRNGVRPESIGTSITHY
AQTSLKGVERRHVWDSGPFVGDSQRMIVETLIDLLATENITTVTLSFLFGMLRMAIEVDA
SLDCRIEVEKRIGLQLEMASLDDLLIPSTQTSDSMFDVDTVHRILVNFLQRIDEDSSGEL
SPCGYDSDGLKSPSHSSVLKVGRLMDGYLAEVAPDPYLKLQKFMALIELLPDYARIVDDG
LYRAIDIYLKAHPSLTESECKKLCKLIDCQKLSQDASSHAAQNDRLPIQMVVRVLYFEQL
RLKSSFSGGGSGCVSGLGLGADGSLSQRFVCSSSGVPSSCVSPQRDNYASLRRENRELKL
EISRMRVRLTELEREQGLMKQQGRMRGGDGGGRHGGEQGRAFLASLSRGFGRITMFGVGG
GPAAADRRRKKSGGRSSQCSDGKARRRHKASFAYD

Transcript Sequence

Transcript ID

OQU78668
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:2396183:2400314:-1 gene:SORBI_3008G026600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGCATCCGCTGTTCTTGGGAGGGAGAGTGAGGCAAAGGCAAAATGGTGTCATTACAAGCA
ATGCACTAGACGTTTACTACACATTGCCAACTCAAGTGCTAACTAATCTTGGCGTCTAAT
AAAACTTTTGGGGGACATTGCATTGACCTGCTGTGCTTGTGCAGGATATTTTCAGATGTC
GCTGAGGATGTGACCGTATCGGTGGATGGACAGTCGTTTCTCCTGCACAAGGTCGGTATA
TACTCCATTTCACCACTCTGCTTCCATCCCATATGAATCTGCGTTGGGTCGTCGGTACAC
CAGCGTGATTGTTTAGGCAATTCTTCAGTTTAGGCAGCCGCATTTTCCTTTGCTGGAAGT
TCAGTGCCATGTTTGGACCAGTACTCCATATGTTTGGGGTGGGCATGCCACTTCTAATAG
ATTGCTTGGCGAAGGACCAGTAGTGAATGAAATAATGGACACTTGCTTTTGTTTGAGGAC
ATAGAAATGGGTATTGCTTTTTCCGCATATGAAACCCGTACAAATGATGTAGTAGTGACT
AATGATTTGAACTCTTATGTGGTGTAATCTGTGATTCACTTCCTGTAATATTCTCGCATT
TGTCTTTGGAAAAATAATGAGTATCACGTATCAGCCAGCTTGGATGCAGTTCATCCTGTA
AGATGTTTTTGGTCATTCTAAAGGTTCCAAAAGCAACAAGCAATGAACAAATAGGGAAAT
TTGAGTTCACCAGTTATTATGTAAAAATCATGCAAATTTTGAAGGATTAGTCAATAATTT
ATGTATAAACCGAGAAATCTAATTGGTACATCCCTCTGCATAACCCATGAAGCAAAATTT
TAAGCTTCCTTTGCTGGATTAAGTTTCACCATGCCCCACAATTGTGTGCTTGTTTTGCAG
TTCCCTTTAGTATCTCGGTGTGGACGAGTACGGAAAATGGTAGTGGACTCCAAGGACCCA
GATCTCCTAAAGCTGGAGCTTGTAAATGTACCAGGGGGAGCTTTTGCATTCGAACTTGCT
GCCAAGTTCTGTTACGGTAGCAATTTCGAAATAACCACGGGAAATGTGGCCCATCTGCGA
TGCGTTGCAGAGTACTTGGAAATGACGGAGGACTATCAAGAGGAGAACCTCATTTTCAGG
ACAGAGACGTACTTGAACGAGATCGTGCTCAAGAACCTCGATAAATCCCTGGAAGTCCTT
TGTAAATGTGATGGATTGGACCCAGTAGTGGAGGAAGTCGGGCTTGTTGATAGGTGTGTC
GATGCAATCGCGGTGAATGCAAGTAAGGAGCAGCTGGTTTCAGGTTTGGCTCACTTGGAA
TGTGATGTGGGATCTGCAAAGCTGCGTATGCACTGCCAGGATTGGTGGGTTGAAGACCTT
TCTGCATTGAGAATTGACCACTATCGGCGTGTGATTGCTGCAATGAGAAGAAATGGGGTC
AGGCCTGAGAGTATTGGCACCTCTATTACTCACTATGCCCAAACATCACTCAAGGGTGTC
GAAAGACGACATGTATGGGACTCAGGTCCCTTTGTCGGAGACAGTCAAAGAATGATTGTT
GAGACACTCATCGATCTGTTAGCGACTGAAAATATTACAACGGTTACTTTATCCTTCCTG
TTTGGCATGCTGAGAATGGCAATTGAAGTTGATGCAAGCCTAGACTGCAGAATCGAAGTC
GAGAAAAGGATTGGCCTTCAGCTGGAGATGGCATCACTAGATGATCTGCTGATCCCCTCC
ACGCAAACAAGTGACTCGATGTTTGACGTTGACACTGTCCACCGTATATTGGTGAACTTC
TTGCAGAGGATAGACGAAGATAGTTCAGGAGAGTTGTCACCTTGTGGATATGACTCTGAC
GGACTCAAGTCTCCAAGCCACAGTTCAGTCCTGAAGGTTGGAAGACTAATGGATGGTTAT
CTTGCAGAGGTAGCACCAGATCCCTATCTGAAACTGCAGAAGTTCATGGCTCTGATTGAA
CTGTTGCCAGATTATGCACGCATTGTTGATGATGGACTCTATCGTGCCATCGACATATAC
CTGAAGGCGCATCCATCTCTGACGGAGTCGGAGTGCAAGAAGCTGTGCAAGCTGATCGAC
TGCCAGAAGCTGTCGCAGGACGCGTCGAGCCACGCGGCGCAGAACGACCGGCTGCCGATC
CAGATGGTGGTGCGCGTGCTCTACTTCGAGCAGCTCCGCCTCAAGTCGTCCTTCTCAGGC
GGCGGGTCCGGGTGCGTGAGCGGCCTCGGGCTGGGCGCCGACGGGTCCCTGTCGCAGCGG
TTCGTGTGCAGCAGCAGCGGCGTGCCGAGCTCGTGCGTGTCGCCGCAGCGGGACAACTAC
GCGTCGCTGCGGCGGGAGAACCGGGAGCTGAAGCTGGAGATCTCGCGGATGCGGGTGCGG
CTGACGGAGCTGGAGCGGGAGCAGGGGCTGATGAAGCAGCAAGGGAGGATGCGCGGCGGG
GACGGCGGCGGGCGGCACGGCGGGGAGCAGGGCCGCGCGTTCCTCGCGTCGCTGTCGAGG
GGCTTCGGCCGCATCACCATGTTCGGCGTCGGCGGCGGGCCCGCGGCGGCGGACAGGAGA
AGGAAGAAGAGCGGCGGCAGGAGCTCCCAGTGCTCCGACGGCAAGGCTCGCAGGCGGCAC
AAGGCGTCCTTCGCCTACGACTGATGCAGTGAAGCTTTGGCATCGTCGACAATGGAGGCA
GGCGGCGATCGTGGATGGATGCCGTCTCTAGCAGCCGGAGGATCGGAGATAGCAGGCCAG
TGGGCTGAGGATGATCAAGACTGCGTTTTTAGATGTTGGTGAAGGCAGTTCGTCACTCAG
ACGAACAAATGGAATGGATCAAGCGGAGGTTTATAGCAGGAATTGCTTGTGCTTGCGACA
GATTTTAGCAGGAACAACGCAGGGTAACGAAATTAGCACCAGGAACTGCTAGTGTCAAAA
ACTTGATGACTGTAATATATACACTAGTCTAGTATACTACTTTTTAGCCTGAAATTTGAA
TGCTTGCCTTCACTGGATTGCATTGCATCATGCATCCATCCATCCTACAGCTTTAAAGCG
CGAAAACGAAATCTACCATTACGTGTTTGAAGGAACGTAAACGAAAACTAGCGTTACATA
ATTCTAGAGGATGGAAAGTAGCATCACTACAGGATAGCGTAATTAGCTTTCTCTGTTTTG
TTTTGGAGAATAAAAGGGTAGCATTACATATCAATTTTCTAGAGCATGGGAAAAGCCAAA
AATTCACCGTTTGACAAAATATCAATTTTCAGCAAAGGATGGTACGAAAATATCTATTTT
TCTTGAAAATATCTATTTTTCTTCTTTGAAAGGGGCGGAATTTAGTCCATCCATAGATGA
CGTCTTTTAAATATATAT