Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU78652
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:1586538:1591494:1 gene:SORBI_3008G019300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGATGGCTAACATGAAGCCAGAGGAGATTACCCACCCTCCCATCATGGATCAGCTG
GCTGGAATGGAGTACTGTGTAGACTCCAACCCATCCTGGGGAGGGTGTATTATGCTGGGT
TTCCAGCATTTCATCCTTTGCTTGGGGACGGCAGTGATGATCCCCACCTTGCTGGTTCCC
CTCATGGGAGGAAATGCGCATGACAAGGCAATTGTGGTACAGACAGTGCTGTTTGTGACT
GGCATAAATACACTGCTTCAAACTCTGTTTGGAACTCGCCTGCCTACGGTTATTGGTGGA
TCATATGCATTTGTAATCCCAGTCATATCAATTATCAGTGATCCCTCGCTGATGCAAATT
TCTGATGACCACACAAGGTTCAAAGTAGCCATGAGAGCCATACAGGGGGCCCAGATAATA
TCCTCCTGCATTCAAATAGTACTTGGCTACAGCCAGTTGTGGGGGTTATGCTGCAGGTTC
TTCAGTCCACTTGGGATGGTTCCAGTTGTTGCACTGGTAGGGATTGGCCTTTTTGAAAGA
GGATTCCCAGTGATTGCAAGCTGTGTGGAAATCGGTCTTCCGATGCTCGTCCTGTTTGTT
GCACTTTCTCAATATTTGAAGCATGTACAAATGTGCAATTTCCCAATATTCGAGAGGTTC
TCAGTGCTCATCTCCGTTGCACTTGTGTGGTTATATGCCCAAATCCTCACTGTGAGCGGA
GCATACAAGCATAGTCCGGTGCTCACTCAGCTCAACTGCCGAACTGACCATGCCAATCTC
ATCACAACTGCACCATGGATTAGGCTTCCATACCCGCTGCAGTGGGGTCCGCCGACTTTC
AGTGCAGACCATTCGTTCGGTATGATGGCTGCTGTGGTGGTGTCCTTGATAGAGTCTACC
GCAGCATTTCAGGCTGCTGCCCGGTTGGCTAGTGCAACGCCCCCACCACCATTTGTCATG
AGCAGGGGCATTGGATGCCAGGGAATTGGGCTGCTATTGGACGGGCTATTTGGTACTGTG
AGCGGCTCTACCGTCTCTGTGGAGAACGTTGGTCTCCTAGGATCAACAAGGATTGGCAGC
AGAAGAGTGGTCCAGATCTCTGCTGCTTTCATGATCTTCTTCTCCATCCTAGGGCGATTT
GGAGCGTTGTTCGCCTCGATTCCATTCACACTGTTTGCTGCCATGTACTGTGTATTGTTT
GGCTATGTTGGTGCTGTGGGGCTCTCCTTCATGCAGTTCACAAACATGAACTCGACGCGC
AACCTCTTCGTCCTTGGCGTCTCGCTCTACCTCGGCATCTCCATCCCAAACTACTTCCAC
CAGTTCACGACGAGCTATCAGCGTGAACCGGCGCACACTAGAGCTGGATGGTTCAACGAC
CTCATCAACACCGTCTTCTCGTCGCCGGCCACCGTCGGGTTCATCGTCTCGATGGTGCTA
GACAACACCCTGCGGGTGAGGAATGGAGACAGGGACCGTGGGATGCCATGGTGGGCGAGG
TTCCGGACGTTCCGTGGTGACAGCCGGACTGTGGAGTTCTACAATCTGCCGTTCAGTCTC
AACCGCTTCTTCCCGGCGTCGTGA

Peptide Sequence

PEP ID

OQU78652
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:1586538:1591494:1 gene:SORBI_3008G019300 transcript:OQU78652 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEMANMKPEEITHPPIMDQLAGMEYCVDSNPSWGGCIMLGFQHFILCLGTAVMIPTLLVP
LMGGNAHDKAIVVQTVLFVTGINTLLQTLFGTRLPTVIGGSYAFVIPVISIISDPSLMQI
SDDHTRFKVAMRAIQGAQIISSCIQIVLGYSQLWGLCCRFFSPLGMVPVVALVGIGLFER
GFPVIASCVEIGLPMLVLFVALSQYLKHVQMCNFPIFERFSVLISVALVWLYAQILTVSG
AYKHSPVLTQLNCRTDHANLITTAPWIRLPYPLQWGPPTFSADHSFGMMAAVVVSLIEST
AAFQAAARLASATPPPPFVMSRGIGCQGIGLLLDGLFGTVSGSTVSVENVGLLGSTRIGS
RRVVQISAAFMIFFSILGRFGALFASIPFTLFAAMYCVLFGYVGAVGLSFMQFTNMNSTR
NLFVLGVSLYLGISIPNYFHQFTTSYQREPAHTRAGWFNDLINTVFSSPATVGFIVSMVL
DNTLRVRNGDRDRGMPWWARFRTFRGDSRTVEFYNLPFSLNRFFPAS

Transcript Sequence

Transcript ID

OQU78652
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:1586538:1591494:1 gene:SORBI_3008G019300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACAATGTTATAGATATAAAATTATTAGGGAAACATTATTAGTAGATGGGCCCCACTCTTA
GCAGCACATACTTACAACTATTACCGTATTAAACAATCTAGTGAAACATAGAAAGCTACT
GGTTTGCTATTGCATCACTGCGCAACAACCTTAGAGATAGAAAGCTTCTAAATCTTAACG
TTACATTGGTGTGGGCCCACTTGCAGTGGCACATCTTGTGGAGAGACTCAGTCTGGAGAG
AGAGAGAGAGAGAGAGAGAGCAATGACATGAAGTGCATGCAAATAAGAAAAGAGTGCATG
TATACTGCTATACTTCTCTCTCTCTCTCTCTGATTTTGAGAGCAAGAATTAGTTGTTTCT
GTTACTGCAGCCCCCAAGGCCTATAAATCCAGCACCTTCCTGCCTTCCTTTGACACAGTT
GTGGATCTGAGAGCATTTGCAGCATTCAGTAGCATTCACAATGGGGAATTTTCCCTTGAT
GCTTTGCCTATTTCTCAAAGCATTTTGTAGTATCGTCAGCATGCTGCTTTGGTGAACATT
GATATGCAGCTCTCTTACATGTTCGAGAACCGAGATGGTTTTTGGTGAGTATTTCCTGCT
GTGATTTTGTTGGTTTCTTGGGTCTCTTGTGCTGGTGAATTCATCAGCATTGAGGGTTTA
TTGTCCATTTGTCCTCTCTGGATAGTATACCCTGATTAAGTTCTTGATCATTCATTGACA
TGTTTTCGCAATTTCAGTTTCATGTTTGAGGAAGGTTAGGATTATTTTGCAACTCTTCCG
GATTGTTGTGAATCTGAAAGCATAGCTTTGTGGGAAAAGAGTGGGTCTTTCTTTTTTTCT
GAGGAATGAATTCCTACGGCATCGGATCCTCTAGGGCCAGAACTCACTAAAGCTTGCAAC
TTTACTGCTGTCATACCTCACTAAACTTCCCTATGGAATAAATTCTGAAGCTGTTTTCTT
TTCCTGCTTTGGTTGGTATTGATCATCGTTGACATAGCAGAGGAGGTGTCTCCCATGGAG
ATGGCTAACATGAAGCCAGAGGAGATTACCCACCCTCCCATCATGGATCAGCTGGCTGGA
ATGGAGTACTGTGTAGACTCCAACCCATCCTGGGGAGGGTGTATTATGCTGGGTTTCCAG
CATTTCATCCTTTGCTTGGGGACGGCAGTGATGATCCCCACCTTGCTGGTTCCCCTCATG
GGAGGAAATGCGCATGACAAGGCAATTGTGGTACAGACAGTGCTGTTTGTGACTGGCATA
AATACACTGCTTCAAACTCTGTTTGGAACTCGCCTGCCTACGGTTATTGGTGGATCATAT
GCATTTGTAATCCCAGTCATATCAATTATCAGTGATCCCTCGCTGATGCAAATTTCTGAT
GACCACACAAGGTTCAAAGTAGCCATGAGAGCCATACAGGGGGCCCAGATAATATCCTCC
TGCATTCAAATAGTACTTGGCTACAGCCAGTTGTGGGGGTTATGCTGCAGGTTCTTCAGT
CCACTTGGGATGGTTCCAGTTGTTGCACTGGTAGGGATTGGCCTTTTTGAAAGAGGATTC
CCAGTGATTGCAAGCTGTGTGGAAATCGGTCTTCCGATGCTCGTCCTGTTTGTTGCACTT
TCTCAATATTTGAAGCATGTACAAATGTGCAATTTCCCAATATTCGAGAGGTTCTCAGTG
CTCATCTCCGTTGCACTTGTGTGGTTATATGCCCAAATCCTCACTGTGAGCGGAGCATAC
AAGCATAGTCCGGTGCTCACTCAGCTCAACTGCCGAACTGACCATGCCAATCTCATCACA
ACTGCACCATGGATTAGGCTTCCATACCCGCTGCAGTGGGGTCCGCCGACTTTCAGTGCA
GACCATTCGTTCGGTATGATGGCTGCTGTGGTGGTGTCCTTGATAGAGTCTACCGCAGCA
TTTCAGGCTGCTGCCCGGTTGGCTAGTGCAACGCCCCCACCACCATTTGTCATGAGCAGG
GGCATTGGATGCCAGGGAATTGGGCTGCTATTGGACGGGCTATTTGGTACTGTGAGCGGC
TCTACCGTCTCTGTGGAGAACGTTGGTCTCCTAGGATCAACAAGGATTGGCAGCAGAAGA
GTGGTCCAGATCTCTGCTGCTTTCATGATCTTCTTCTCCATCCTAGGGCGATTTGGAGCG
TTGTTCGCCTCGATTCCATTCACACTGTTTGCTGCCATGTACTGTGTATTGTTTGGCTAT
GTTGGTGCTGTGGGGCTCTCCTTCATGCAGTTCACAAACATGAACTCGACGCGCAACCTC
TTCGTCCTTGGCGTCTCGCTCTACCTCGGCATCTCCATCCCAAACTACTTCCACCAGTTC
ACGACGAGCTATCAGCGTGAACCGGCGCACACTAGAGCTGGATGGTTCAACGACCTCATC
AACACCGTCTTCTCGTCGCCGGCCACCGTCGGGTTCATCGTCTCGATGGTGCTAGACAAC
ACCCTGCGGGTGAGGAATGGAGACAGGGACCGTGGGATGCCATGGTGGGCGAGGTTCCGG
ACGTTCCGTGGTGACAGCCGGACTGTGGAGTTCTACAATCTGCCGTTCAGTCTCAACCGC
TTCTTCCCGGCGTCGTGAGTCAGCAGTAGGATTCTAGGGAAAGACTGAAGCCAACCGTAG
AGTGAGTCTAGCTACCAATATCAATGTAATTATGGTTTGGCTTCCATAGATGTTAGAGAA
GAAAAGGAGCTAGGGCTAGTGGAGGTAGAAGAAAGCATATACTCTATCGGTTTCAAATTA
TAAGATGTTTTGCCTTTTTCTACATACATTGTTTTCCGATTTGTTACATGTGCTCTTGTA
CCAATTATAATATGAGTAGAACATCCATGTATCACGGGGGCGGTGTGTGTACTGTTTTGG
TGACTAGTGAAATGCACTC