Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU78646
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:8:1472077:1476514:1 gene:SORBI_3008G018100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGAACTCACAAGATGAATCAGAAAGTGACGAGCAAGAAGAATTCTTGGAAAAGAAG
CCATTGCGGCCCTGCACATCGCCAGAACAGTCTCCAGCTTCATTTGGTCAACCCTTACCA
AAGTCACCAATTCCTCTCAAGGCTACTCCAATCTCAGCTGCATTTCCCATGCCACAACAC
AAAGGTGGATCGTCACATGATCCTCTGAAGGAAACTCCAATGTCAGCGGCATTTCCCATG
CCAGGACCCAAAGATGAACCATCAGATGATCCTCTCAAGGCTACTCCAATCTCAGCTGCA
TTTCCCACGCGACGACACAAAGATGATCCTCTCAAGGCTACTCCAATGTCAAGGTCATTT
CCAATAACACGACATGAAGATGAATCATCAGACGAAGACTACAAACCCTTTTCTGGTCAG
AAAAAATCAACCCCGCTGAAGACAGCCAAGAGGACTCAGCAGGCTGAATGCTCCAATGCA
GGTAACACCAAGCGCAGGTCAATACAGAGAAGCCTGAACAGAGAGCTTGCCTTCAGTTCA
TCCTTGTCAAGCAACCCAAATGAATCTGTCGAAGAGGTGATGATAATGTTTGATTCACTT
CGGCGGCGCATACTGCAATTGGATGAAAATGAGGACGCAGGCAAGCGGGCCGACTTGAAG
GCTGGAAGTCTCATGATGCAGAATGGCCTGAGGATCAACAATTCGAAGATCATAGGACCT
GTACCTGGTGTTGAAATTGGAGACATTTTCTTCTTCAGGATTGAAATGTGCATTGTTGGT
TTACATGCACCTGCCATGGCTGGCATTGATCACACCTCTGCTAAGCATGCTGGAAAAGAT
GAGATTCTGGCGGTTAGCATCATCTCATCTGGTGGTTATGAGAATGATGACAATGACACG
GACATTTTGGTGTACACAGGTCAGGGAGGCAATAGTCGGCACAAGGATAAGCATGACCAG
AAACTTGAAGGAGGTAACCTTGCTCTCATGAATAGTATGAAAAAGAAAAACCTAATCAGG
GTTGTGCGCAGCGCACAGGACCCTTTCTGCAACTCGAGCAAAGTTTACATCTATGATGGA
CTTTACCGGGTCGAAGAATCCTGGACAGAAAAAGCAAAGAATGGTTTTAGTGTTTTCAAG
TACAAGATGAGAAGGGAGCCGGGACAGAGAGATGGAATTTCAGTTTGGAAGATGACTGAG
AAGTGGAAAGCAAATCCTGCGACAAGAAACAATGTTATAAGGGCAGATATATCGTCAAAA
GCTGAGAAGCTACCTGTATGCCTTGTTAATGATGTAGATGACCAGAAAGGGCCAAGCTAC
TTCAACTATGTTACTGGAGTGGAGCATTCAGGGCCACTCAGGAAGACAAAACCTTTACAA
AGCTGCAAGTGTCCTAGTGTGTGCTTGCCTAGTGATACTAATTGCTCATGTGCACAACTG
AACAGTGGTTATCTTCCTTACAGCGCCAATGGAGTGCTTGTGAAGCACATTCCAATGCTT
TATGAGTGCTCCTCCACGTGCCAGTGTTGTCAAAATTGTCGAAACAGGGTCACACAGAAA
GGTGTCAATCTTAACTTTGAGGTCTTTTGGACTGGGGATTCCGGATGGGGTGTCCGGTCC
TGGGACCCAATCCGTGCTGGCACATTCATCTGTGAGTATGCCGGTCAAATCATTGATGAA
ACAAATATGAACATGGGTGATGAGGAAGATGAATATACCTTTTGCACATCATGGCACAGT
GACAAGGTTTCAAGATGGAATTTGGGAGCAGAATTACTTGAAGAAAAAAGTGATAATGCC
ACAACAGAGAATCTGAAGAAGCTGCCTGTTGTCATAAGTGCAAAACGTTCAGGAAATGTG
GCTCGTTTTCTGAATCATAGCTGTTCCCCGAACGTCCTTTGGCAGCCCGTGCAGTATGAC
CATGGCGATGACAGTTACCCACATATCATGTTTTTTGCGATGAAACATATTCCTCCCATG
ACTGAACTGACGTATGATTATGGTACAAGAGGAGCTCCTCCTGGCATTAAGGGGAAGTTT
CCAAATGCTTGCAAACTCAAGAAATGCTTATGTGGCAAGCGTGGACTAATGCACTAA

Peptide Sequence

PEP ID

OQU78646
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:8:1472077:1476514:1 gene:SORBI_3008G018100 transcript:OQU78646 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MENSQDESESDEQEEFLEKKPLRPCTSPEQSPASFGQPLPKSPIPLKATPISAAFPMPQH
KGGSSHDPLKETPMSAAFPMPGPKDEPSDDPLKATPISAAFPTRRHKDDPLKATPMSRSF
PITRHEDESSDEDYKPFSGQKKSTPLKTAKRTQQAECSNAGNTKRRSIQRSLNRELAFSS
SLSSNPNESVEEVMIMFDSLRRRILQLDENEDAGKRADLKAGSLMMQNGLRINNSKIIGP
VPGVEIGDIFFFRIEMCIVGLHAPAMAGIDHTSAKHAGKDEILAVSIISSGGYENDDNDT
DILVYTGQGGNSRHKDKHDQKLEGGNLALMNSMKKKNLIRVVRSAQDPFCNSSKVYIYDG
LYRVEESWTEKAKNGFSVFKYKMRREPGQRDGISVWKMTEKWKANPATRNNVIRADISSK
AEKLPVCLVNDVDDQKGPSYFNYVTGVEHSGPLRKTKPLQSCKCPSVCLPSDTNCSCAQL
NSGYLPYSANGVLVKHIPMLYECSSTCQCCQNCRNRVTQKGVNLNFEVFWTGDSGWGVRS
WDPIRAGTFICEYAGQIIDETNMNMGDEEDEYTFCTSWHSDKVSRWNLGAELLEEKSDNA
TTENLKKLPVVISAKRSGNVARFLNHSCSPNVLWQPVQYDHGDDSYPHIMFFAMKHIPPM
TELTYDYGTRGAPPGIKGKFPNACKLKKCLCGKRGLMH

Transcript Sequence

Transcript ID

OQU78646
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:8:1472077:1476514:1 gene:SORBI_3008G018100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTAATGAGCGGTGACATGACTGCCCGTCAGTCCAGTGTATGCAGAAGTGTCCCGTATATA
CATGTATATATGTTCAAGCGACCTGAACGAGGAGGTCTTAACACTGTGCTAGTGGCAAGA
GTGTCTTCCTTTCCTCTCCAGCTGTGACCTCTCCGCTCTGGCTCTACACTGTTGCTCGCT
CCGACGACACCCTCAAGGTGACACCTCTCATCTAAACTTTCTCAGCTAATCTGCCATGAG
TTGGAGTTTTCTCATCATCTTTGTGATAATCTCTTGCGATTTGGCTAGTAAATGGCTGCC
TCGAATGAACTAGGATTTAGATTTGACTGGTTGCTTGGACGTACTCTTCAATGTCGCTAT
GTATTTTCTTGCCCCCAATCTTTTCTTTACTGATACCTGCCTTTTTTTAGTTGATATCTA
AGGTGAAAATGAAGCAGTAACTTGATGAAATATTTCTACTTTTTTTTGGGGTGGAACCCT
CCTGTCCCATCAGTAAATTTCATTGTGTAAATTTACTGATACATACAAATATCTAGTGCG
ACTGTGTGGCTTCCCAGTGCTCACTGCTCAGCAAAACATGTAGTAGTGACAAATAAATAT
GCTTCTTTTTTTTCAGATATATGTTCATTGTTTCCTTATTGGACTTGACAACAAATTATG
CTTCTGTTATTTTCTTTCAGAAGTTGACATCTGTTGTTTCTTTCTGAAGTCTGCTCTCTT
ATATTCTTCTTTATTAGGTTTGTAGTTTATTTTCCCATATATCCATCTAGCTCACTTGTT
TATAGTATACAAAATTAGACATTTTCTACACGGTTATAGTAGTTAGCCGACCATTTTCAC
ACTGGCCACCATCACAAATACAGACTGCTCACTGACTTTTATTTTTTACCATTGTTCAGT
TCCACTACTAGGAGTTTGCCATGGACAACTCGCAAGATGAATCAGAAAATGACGAGCAAG
AGCTAGATGTGAGTGTGAGTGTGTGGCTTCTCTGTGCTCAGCAACGCAATACATATGTAC
TGATGACTACTAAATACTATGCTTCTTTTTTTTCCAGATTTGTTCATTGTTTTGACAACA
AATTATGCTTCTGTTGTTTTCTTTCAGAAGTTGCCGTTTGTTTTTTTTCAGAAGTCTGTG
CTCTCTTATATTCTGCTCTATGTTTGTGATTTCTATTCTAATATATCCATCTCACTTGTT
TATAGCGTACAAAATAATAGACATTGTCTACACAGCAATAGTAATTAGCTGGCAGTTTCA
CACTGCCACCATCACAAGACTTTTATTAACCATTGTTCACTGCCACTACTAGGAGTCCAT
GGAGAACTCACAAGATGAATCAGAAAGTGACGAGCAAGAAGAATTCTTGGAAAAGAAGCC
ATTGCGGCCCTGCACATCGCCAGAACAGTCTCCAGCTTCATTTGGTCAACCCTTACCAAA
GTCACCAATTCCTCTCAAGGCTACTCCAATCTCAGCTGCATTTCCCATGCCACAACACAA
AGGTGGATCGTCACATGATCCTCTGAAGGAAACTCCAATGTCAGCGGCATTTCCCATGCC
AGGACCCAAAGATGAACCATCAGATGATCCTCTCAAGGCTACTCCAATCTCAGCTGCATT
TCCCACGCGACGACACAAAGATGATCCTCTCAAGGCTACTCCAATGTCAAGGTCATTTCC
AATAACACGACATGAAGATGAATCATCAGACGAAGACTACAAACCCTTTTCTGGTCAGAA
AAAATCAACCCCGCTGAAGACAGCCAAGAGGACTCAGCAGGCTGAATGCTCCAATGCAGG
TAACACCAAGCGCAGGTCAATACAGAGAAGCCTGAACAGAGAGCTTGCCTTCAGTTCATC
CTTGTCAAGCAACCCAAATGAATCTGTCGAAGAGGTGATGATAATGTTTGATTCACTTCG
GCGGCGCATACTGCAATTGGATGAAAATGAGGACGCAGGCAAGCGGGCCGACTTGAAGGC
TGGAAGTCTCATGATGCAGAATGGCCTGAGGATCAACAATTCGAAGATCATAGGACCTGT
ACCTGGTGTTGAAATTGGAGACATTTTCTTCTTCAGGATTGAAATGTGCATTGTTGGTTT
ACATGCACCTGCCATGGCTGGCATTGATCACACCTCTGCTAAGCATGCTGGAAAAGATGA
GATTCTGGCGGTTAGCATCATCTCATCTGGTGGTTATGAGAATGATGACAATGACACGGA
CATTTTGGTGTACACAGGTCAGGGAGGCAATAGTCGGCACAAGGATAAGCATGACCAGAA
ACTTGAAGGAGGTAACCTTGCTCTCATGAATAGTATGAAAAAGAAAAACCTAATCAGGGT
TGTGCGCAGCGCACAGGACCCTTTCTGCAACTCGAGCAAAGTTTACATCTATGATGGACT
TTACCGGGTCGAAGAATCCTGGACAGAAAAAGCAAAGAATGGTTTTAGTGTTTTCAAGTA
CAAGATGAGAAGGGAGCCGGGACAGAGAGATGGAATTTCAGTTTGGAAGATGACTGAGAA
GTGGAAAGCAAATCCTGCGACAAGAAACAATGTTATAAGGGCAGATATATCGTCAAAAGC
TGAGAAGCTACCTGTATGCCTTGTTAATGATGTAGATGACCAGAAAGGGCCAAGCTACTT
CAACTATGTTACTGGAGTGGAGCATTCAGGGCCACTCAGGAAGACAAAACCTTTACAAAG
CTGCAAGTGTCCTAGTGTGTGCTTGCCTAGTGATACTAATTGCTCATGTGCACAACTGAA
CAGTGGTTATCTTCCTTACAGCGCCAATGGAGTGCTTGTGAAGCACATTCCAATGCTTTA
TGAGTGCTCCTCCACGTGCCAGTGTTGTCAAAATTGTCGAAACAGGGTCACACAGAAAGG
TGTCAATCTTAACTTTGAGGTCTTTTGGACTGGGGATTCCGGATGGGGTGTCCGGTCCTG
GGACCCAATCCGTGCTGGCACATTCATCTGTGAGTATGCCGGTCAAATCATTGATGAAAC
AAATATGAACATGGGTGATGAGGAAGATGAATATACCTTTTGCACATCATGGCACAGTGA
CAAGGTTTCAAGATGGAATTTGGGAGCAGAATTACTTGAAGAAAAAAGTGATAATGCCAC
AACAGAGAATCTGAAGAAGCTGCCTGTTGTCATAAGTGCAAAACGTTCAGGAAATGTGGC
TCGTTTTCTGAATCATAGCTGTTCCCCGAACGTCCTTTGGCAGCCCGTGCAGTATGACCA
TGGCGATGACAGTTACCCACATATCATGTTTTTTGCGATGAAACATATTCCTCCCATGAC
TGAACTGACGTATGATTATGGTACAAGAGGAGCTCCTCCTGGCATTAAGGGGAAGTTTCC
AAATGCTTGCAAACTCAAGAAATGCTTATGTGGCAAGCGTGGACTAATGCACTAAAGCAG
GTAAGAAAAACCACACTATGGATGGAAACATACTTCTTAACCGTTATTTTCTGTCCATCT
TTGTATCAATTAGTTTCTTTTCAAGAGAATGTATCTGTCATTGCATGGTTTGTCAGTGGA
CAGTAGATTCTACTTCCTCACCATGCTTAACAATTCTTTTTTTTTGTTTGCTTGTGGGCA
TTTAAACAATGCATGTGCATTTGAAACTCTGCCCTCCTAGAAAAATCACTAGTGGATGTT
ATCTTTGTAGCATACACAAGGCAGCACTACTCTTTTTATCAGGACTGTAGCCTGTAGGTC
AGTTCCACACCTCACATAAAGATAAGGCGATTGACCTCTATTGCTTTGCCAAAACCTGGA
CTAATCATTGATGATTTAGAGTTAACATGTTTTTAACTGCTATATGTGTCAACGTATGAG
ATTGTGTCAATTTGATCTGTAGTTTTGACGAGATCATTTTGGCCCTGGTTCTGGTTGCCT
AATGCTGCTGCTATCTTGGTTTTCAGGTTGTAGTGTTCCTTTTGGGCTGGGCTTGCCGTA
AGCAGCATGACGGATGTGGTAAGGGAGTCACCAGTCTATTTTGGATGGTCGCTGGCAACG
GGGAAGGAAGGTAGCAGATAATGAAGTCCTCAGTCTTTGTGGTAGTGGATGGGTGTTTTG
TATATATTACTAGTATTACTATGCATGGCGTGGACCTGTAGTAGTAGTAGTTTACGAACA
ATGTGTTCTCTTCTCCCAGACTATGGAATGCCAGTGTGAAATGTAACTTGTCAATCTTTG
GATGGGACAGAGAATGACTGTGTGTGTTGTGATAAAATGTGTTCTACTAGATGATTCCTG
CTAGAGCTGTTCCTGCAGGGATTAAAACAAAAGACAAAAAAAAATGTATGGAATGCCAGT
GTGAAATGTGACATGTAAATCTTTGGAT